Wall clock time and date at job start Thu Mar 4 2021 18:35:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86305 * 1 3 3 C 1.86295 * 109.76770 * 2 1 4 4 C 1.84433 * 109.77504 * 239.19739 * 2 1 3 5 5 C 1.55421 * 115.24273 * 324.57115 * 4 2 1 6 6 C 1.55116 * 111.36939 * 318.81286 * 5 4 2 7 7 N 1.44303 * 109.16076 * 322.22800 * 6 5 4 8 8 C 1.34776 * 123.20400 * 291.09447 * 7 6 5 9 9 O 1.21282 * 119.99775 * 5.43610 * 8 7 6 10 10 C 1.50699 * 120.00307 * 185.43353 * 8 7 6 11 11 F 1.39895 * 109.47337 * 293.27577 * 10 8 7 12 12 F 1.39900 * 109.46589 * 53.27572 * 10 8 7 13 13 O 1.42894 * 109.47231 * 173.27498 * 10 8 7 14 14 C 1.35904 * 117.00451 * 180.02562 * 13 10 8 15 15 C 1.38729 * 120.05018 * 359.72517 * 14 13 10 16 16 C 1.38149 * 119.94362 * 179.74642 * 15 14 13 17 17 C 1.38259 * 120.05313 * 0.50481 * 16 15 14 18 18 C 1.50699 * 119.94529 * 179.74788 * 17 16 15 19 19 O 1.42901 * 109.47159 * 245.02505 * 18 17 16 20 20 Si 1.86299 * 109.46995 * 5.02314 * 18 17 16 21 21 H 1.48500 * 109.47167 * 60.00339 * 20 18 17 22 22 H 1.48504 * 109.47292 * 180.02562 * 20 18 17 23 23 H 1.48503 * 109.47277 * 300.00123 * 20 18 17 24 24 C 1.38268 * 120.11345 * 359.77229 * 17 16 15 25 25 C 1.38144 * 120.05325 * 359.97261 * 24 17 16 26 26 C 1.46957 * 113.70704 * 111.19753 * 7 6 5 27 27 C 1.45876 * 113.51768 * 260.26958 * 26 7 6 28 28 H 1.08993 * 109.46873 * 306.44710 * 1 2 3 29 29 H 1.09004 * 109.46852 * 66.45074 * 1 2 3 30 30 H 1.09002 * 109.46992 * 186.44708 * 1 2 3 31 31 H 1.09005 * 109.47500 * 180.75094 * 3 2 1 32 32 H 1.09009 * 109.47310 * 300.74752 * 3 2 1 33 33 H 1.08997 * 109.47842 * 60.74627 * 3 2 1 34 34 H 1.08998 * 108.32795 * 86.06371 * 4 2 1 35 35 H 1.09003 * 108.32550 * 203.25888 * 4 2 1 36 36 H 1.08998 * 109.10242 * 79.29576 * 5 4 2 37 37 H 1.08999 * 109.10135 * 198.39107 * 5 4 2 38 38 H 1.09001 * 109.50572 * 82.16290 * 6 5 4 39 39 H 1.08997 * 109.50619 * 202.24654 * 6 5 4 40 40 H 1.08008 * 120.02869 * 359.97438 * 15 14 13 41 41 H 1.07994 * 119.97351 * 180.23490 * 16 15 14 42 42 H 1.08996 * 109.47560 * 125.02295 * 18 17 16 43 43 H 0.96697 * 113.99874 * 59.99865 * 19 18 17 44 44 H 1.08002 * 119.97562 * 179.97438 * 24 17 16 45 45 H 1.08003 * 120.02924 * 179.97438 * 25 24 17 46 46 H 1.09001 * 108.65870 * 139.26803 * 26 7 6 47 47 H 1.08995 * 108.65434 * 21.27158 * 26 7 6 48 48 H 1.09002 * 110.23832 * 177.34040 * 27 26 7 49 49 H 1.09003 * 110.23660 * 299.35173 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4931 1.7532 0.0000 4 6 2.4870 -0.8888 -1.4907 5 6 1.6333 -2.1066 -1.9420 6 6 1.1536 -2.9421 -0.7264 7 7 2.2031 -2.9842 0.2631 8 6 3.3613 -3.6495 0.0828 9 8 3.6023 -4.1685 -0.9865 10 6 4.3568 -3.7484 1.2098 11 9 4.8753 -2.4790 1.4869 12 9 3.7216 -4.2519 2.3501 13 8 5.4199 -4.6248 0.8307 14 6 6.4087 -4.8254 1.7413 15 6 6.3595 -4.1873 2.9721 16 6 7.3631 -4.3969 3.8981 17 6 8.4212 -5.2337 3.5949 18 6 9.5175 -5.4561 4.6047 19 8 10.7452 -4.9278 4.0990 20 14 9.0795 -4.5939 6.1970 21 1 7.8038 -5.1429 6.7225 22 1 10.1602 -4.8125 7.1918 23 1 8.9259 -3.1383 5.9457 24 6 8.4754 -5.8663 2.3667 25 6 7.4717 -5.6641 1.4394 26 6 1.8904 -2.2354 1.4883 27 6 2.5053 -0.9134 1.5355 28 1 -0.3633 0.6105 0.8266 29 1 -0.3633 0.4106 -0.9421 30 1 -0.3633 -1.0212 0.1154 31 1 3.5831 1.7476 -0.0135 32 1 2.1215 2.2729 -0.8833 33 1 2.1435 2.2650 0.8965 34 1 2.5362 -0.1796 -2.3170 35 1 3.4976 -1.2402 -1.2823 36 1 0.7642 -1.7482 -2.4936 37 1 2.2334 -2.7405 -2.5949 38 1 0.2646 -2.4812 -0.2960 39 1 0.9171 -3.9552 -1.0516 40 1 5.5355 -3.5300 3.2077 41 1 7.3234 -3.9034 4.8578 42 1 9.6303 -6.5244 4.7892 43 1 10.7178 -3.9795 3.9118 44 1 9.3032 -6.5192 2.1320 45 1 7.5146 -6.1581 0.4799 46 1 2.2358 -2.8114 2.3468 47 1 0.8090 -2.1195 1.5597 48 1 2.2015 -0.3883 2.4411 49 1 3.5911 -1.0010 1.4953 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:35:58 Heat of formation + Delta-G solvation = -183.447122 kcal Electronic energy + Delta-G solvation = -34175.319064 eV Core-core repulsion = 29477.374904 eV Total energy + Delta-G solvation = -4697.944160 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 373.148 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.01629 -48.94041 -41.58534 -41.34572 -39.42682 -38.16424 -37.23610 -34.20658 -32.49210 -32.09289 -31.76739 -29.60133 -28.98435 -28.47800 -27.14197 -26.10344 -24.73869 -24.05565 -22.91886 -22.50533 -21.24462 -20.38361 -19.77782 -19.21723 -18.52899 -17.87944 -17.45443 -17.01646 -16.82853 -16.50279 -16.28175 -16.13235 -15.87290 -15.72149 -15.52071 -15.46341 -15.26716 -15.15068 -14.96901 -14.80105 -14.66673 -14.47026 -14.42013 -14.13893 -13.93672 -13.72019 -13.65778 -13.39338 -13.12720 -13.06982 -12.92928 -12.60358 -12.50525 -12.36225 -12.24856 -12.17794 -12.11940 -12.06943 -11.66340 -11.42511 -10.78186 -10.52872 -10.43737 -10.34696 -10.22820 -10.06652 -9.63165 -0.02154 0.10608 0.44720 0.61893 1.16454 1.44333 1.51532 1.66921 1.70097 1.89746 1.90900 1.92743 2.00294 2.41867 2.51230 2.63943 3.18493 3.45485 3.50701 3.62608 3.72997 3.82521 3.97548 4.01465 4.04432 4.16574 4.20654 4.36912 4.39887 4.46917 4.60503 4.62116 4.72423 4.76657 4.78624 4.79424 4.79596 4.87718 4.95179 4.97327 4.99502 5.06313 5.13806 5.19330 5.30656 5.35172 5.40142 5.42319 5.56055 5.72667 5.79172 5.85268 6.34850 6.69169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 1.050 2.950 3 C -0.462 4.462 4 C -0.430 4.430 5 C -0.119 4.119 6 C 0.088 3.912 7 N -0.572 5.572 8 C 0.518 3.482 9 O -0.508 6.508 10 C 0.436 3.564 11 F -0.167 7.167 12 F -0.170 7.170 13 O -0.307 6.307 14 C 0.083 3.917 15 C -0.194 4.194 16 C -0.090 4.090 17 C -0.140 4.140 18 C -0.074 4.074 19 O -0.550 6.550 20 Si 0.975 3.025 21 H -0.257 1.257 22 H -0.272 1.272 23 H -0.251 1.251 24 C -0.052 4.052 25 C -0.136 4.136 26 C 0.080 3.920 27 C -0.449 4.449 28 H 0.080 0.920 29 H 0.074 0.926 30 H 0.084 0.916 31 H 0.058 0.942 32 H 0.067 0.933 33 H 0.078 0.922 34 H 0.070 0.930 35 H 0.038 0.962 36 H 0.095 0.905 37 H 0.038 0.962 38 H 0.141 0.859 39 H 0.077 0.923 40 H 0.138 0.862 41 H 0.143 0.857 42 H 0.130 0.870 43 H 0.389 0.611 44 H 0.158 0.842 45 H 0.146 0.854 46 H 0.079 0.921 47 H 0.132 0.868 48 H 0.124 0.876 49 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.964 3.676 3.684 7.192 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.242 2.758 3 C -0.569 4.569 4 C -0.512 4.512 5 C -0.158 4.158 6 C -0.033 4.033 7 N -0.305 5.305 8 C 0.299 3.701 9 O -0.382 6.382 10 C 0.358 3.642 11 F -0.148 7.148 12 F -0.151 7.151 13 O -0.224 6.224 14 C 0.041 3.959 15 C -0.213 4.213 16 C -0.107 4.107 17 C -0.141 4.141 18 C -0.184 4.184 19 O -0.357 6.357 20 Si 0.800 3.200 21 H -0.181 1.181 22 H -0.197 1.197 23 H -0.175 1.175 24 C -0.070 4.070 25 C -0.154 4.154 26 C -0.040 4.040 27 C -0.533 4.533 28 H 0.100 0.900 29 H 0.093 0.907 30 H 0.103 0.897 31 H 0.077 0.923 32 H 0.086 0.914 33 H 0.097 0.903 34 H 0.089 0.911 35 H 0.057 0.943 36 H 0.113 0.887 37 H 0.057 0.943 38 H 0.158 0.842 39 H 0.096 0.904 40 H 0.156 0.844 41 H 0.160 0.840 42 H 0.148 0.852 43 H 0.238 0.762 44 H 0.175 0.825 45 H 0.163 0.837 46 H 0.097 0.903 47 H 0.150 0.850 48 H 0.143 0.857 49 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -4.832 3.104 3.755 6.862 hybrid contribution 0.377 0.441 -0.617 0.847 sum -4.455 3.545 3.138 6.501 Atomic orbital electron populations 1.26217 1.18152 1.05543 1.05472 0.78745 0.68069 0.64901 0.64134 1.26265 1.05872 1.19960 1.04816 1.26881 1.03955 1.03529 1.16853 1.22225 1.00492 0.95727 0.97320 1.22421 0.89504 1.02243 0.89166 1.47530 1.14654 1.47725 1.20586 1.19228 0.82718 0.81398 0.86802 1.90826 1.75153 1.46663 1.25556 1.21764 0.84338 0.75365 0.82701 1.93108 1.87381 1.40295 1.94062 1.93132 1.81855 1.87020 1.53129 1.86648 1.31587 1.62215 1.41991 1.19282 0.89181 0.98515 0.88962 1.21566 1.02599 1.03566 0.93566 1.21054 0.93158 0.97295 0.99240 1.20526 0.97257 0.99068 0.97246 1.24976 0.84529 1.06084 1.02853 1.86498 1.32106 1.29843 1.87297 0.85318 0.79409 0.79719 0.75581 1.18061 1.19734 1.17481 1.21109 0.97057 0.97407 0.91434 1.20756 0.92670 0.99702 1.02286 1.20647 1.04698 0.93465 0.85173 1.25826 1.06181 1.03319 1.17984 0.90040 0.90655 0.89729 0.92294 0.91399 0.90304 0.91095 0.94258 0.88670 0.94304 0.84184 0.90421 0.84411 0.83984 0.85191 0.76185 0.82474 0.83661 0.90299 0.85012 0.85740 0.90512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 4.46 8.44 113.37 0.96 5.41 16 2 Si 1.05 -7.51 10.45 68.60 0.72 -6.79 16 3 C -0.46 1.77 8.65 113.37 0.98 2.75 16 4 C -0.43 0.16 4.23 72.81 0.31 0.46 16 5 C -0.12 0.05 5.61 32.15 0.18 0.24 16 6 C 0.09 -0.30 5.28 87.51 0.46 0.16 16 7 N -0.57 0.03 1.83 -834.59 -1.53 -1.50 16 8 C 0.52 4.02 6.54 87.66 0.57 4.60 16 9 O -0.51 -7.54 15.86 15.92 0.25 -7.29 16 10 C 0.44 3.14 1.52 71.24 0.11 3.25 16 11 F -0.17 -0.89 12.20 44.97 0.55 -0.35 16 12 F -0.17 -0.80 13.21 44.97 0.59 -0.21 16 13 O -0.31 -3.42 9.61 -73.51 -0.71 -4.13 16 14 C 0.08 0.67 6.48 22.50 0.15 0.82 16 15 C -0.19 -1.02 8.26 22.37 0.18 -0.83 16 16 C -0.09 -0.18 8.66 22.25 0.19 0.01 16 17 C -0.14 -0.13 5.35 -19.85 -0.11 -0.23 16 18 C -0.07 0.14 2.80 71.24 0.20 0.34 16 19 O -0.55 0.30 12.83 -148.98 -1.91 -1.62 16 20 Si 0.98 -1.85 25.13 68.60 1.72 -0.13 16 21 H -0.26 0.18 7.11 99.48 0.71 0.88 16 22 H -0.27 -0.41 7.11 99.48 0.71 0.29 16 23 H -0.25 0.51 7.04 99.48 0.70 1.21 16 24 C -0.05 -0.08 9.68 22.25 0.22 0.13 16 25 C -0.14 -0.68 9.99 22.36 0.22 -0.45 16 26 C 0.08 -0.48 4.50 84.11 0.38 -0.10 16 27 C -0.45 2.85 5.06 69.80 0.35 3.20 16 28 H 0.08 -0.88 7.96 -2.39 -0.02 -0.90 16 29 H 0.07 -0.68 7.96 -2.38 -0.02 -0.70 16 30 H 0.08 -1.07 4.82 -2.39 -0.01 -1.08 16 31 H 0.06 -0.09 7.96 -2.38 -0.02 -0.11 16 32 H 0.07 -0.23 7.96 -2.38 -0.02 -0.24 16 33 H 0.08 -0.41 7.96 -2.39 -0.02 -0.43 16 34 H 0.07 -0.02 7.90 -2.39 -0.02 -0.04 16 35 H 0.04 0.20 7.40 -2.39 -0.02 0.18 16 36 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 37 H 0.04 0.24 7.62 -2.39 -0.02 0.22 16 38 H 0.14 -1.57 4.28 -2.39 -0.01 -1.58 16 39 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 40 H 0.14 0.52 5.10 -2.91 -0.01 0.50 16 41 H 0.14 -0.23 4.86 -2.91 -0.01 -0.24 16 42 H 0.13 -0.53 7.96 -2.39 -0.02 -0.55 16 43 H 0.39 -2.54 8.70 -74.06 -0.64 -3.18 16 44 H 0.16 -0.32 8.06 -2.91 -0.02 -0.34 16 45 H 0.15 0.45 8.06 -2.91 -0.02 0.43 16 46 H 0.08 -0.39 5.83 -2.39 -0.01 -0.40 16 47 H 0.13 -1.69 6.14 -2.39 -0.01 -1.71 16 48 H 0.12 -1.31 8.02 -2.39 -0.02 -1.33 16 49 H 0.08 -0.17 5.13 -2.39 -0.01 -0.18 16 Total: 0.00 -18.37 379.41 6.15 -12.22 By element: Atomic # 1 Polarization: -11.08 SS G_CDS: 1.10 Total: -9.97 kcal Atomic # 6 Polarization: 14.40 SS G_CDS: 5.36 Total: 19.76 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -1.53 Total: -1.50 kcal Atomic # 8 Polarization: -10.66 SS G_CDS: -2.37 Total: -13.03 kcal Atomic # 9 Polarization: -1.70 SS G_CDS: 1.14 Total: -0.55 kcal Atomic # 14 Polarization: -9.36 SS G_CDS: 2.44 Total: -6.92 kcal Total: -18.37 6.15 -12.22 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -171.229 kcal (2) G-P(sol) polarization free energy of solvation -18.371 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.601 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.218 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds