Wall clock time and date at job start Thu Mar 4 2021 18:36:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86294 * 1 3 3 C 1.86303 * 109.44015 * 2 1 4 4 C 1.88799 * 109.44147 * 119.92423 * 2 1 3 5 5 C 1.49874 * 108.19207 * 50.78233 * 4 2 1 6 6 C 1.54333 * 114.58760 * 84.45359 * 5 4 2 7 7 N 1.47121 * 117.93537 * 314.26075 * 6 5 4 8 8 C 1.34772 * 118.22834 * 134.72079 * 7 6 5 9 9 O 1.21284 * 119.99979 * 179.97438 * 8 7 6 10 10 C 1.50705 * 120.00258 * 359.97438 * 8 7 6 11 11 O 1.42900 * 109.47097 * 179.97438 * 10 8 7 12 12 C 1.35900 * 116.99839 * 179.97438 * 11 10 8 13 13 C 1.38716 * 120.05740 * 359.72407 * 12 11 10 14 14 C 1.38167 * 119.94243 * 179.72177 * 13 12 11 15 15 C 1.38237 * 120.05439 * 0.57256 * 14 13 12 16 16 C 1.38280 * 120.11463 * 359.67800 * 15 14 13 17 17 C 1.50703 * 119.97449 * 180.02562 * 16 15 14 18 18 O 1.42894 * 109.47667 * 245.02341 * 17 16 15 19 19 Si 1.86302 * 109.46857 * 5.02557 * 17 16 15 20 20 H 1.48501 * 109.47241 * 299.99805 * 19 17 16 21 21 H 1.48497 * 109.47159 * 60.00132 * 19 17 16 22 22 H 1.48509 * 109.46926 * 179.97438 * 19 17 16 23 23 C 1.38123 * 120.05984 * 0.04477 * 16 15 14 24 24 C 1.42774 * 123.53698 * 314.70878 * 7 6 5 25 25 C 1.54950 * 107.21088 * 96.96223 * 24 7 6 26 26 H 1.08996 * 109.47250 * 300.07869 * 1 2 3 27 27 H 1.09005 * 109.46871 * 60.07779 * 1 2 3 28 28 H 1.08999 * 109.47512 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.46999 * 179.97438 * 3 2 1 30 30 H 1.08997 * 109.47108 * 299.92458 * 3 2 1 31 31 H 1.08996 * 109.47097 * 59.92409 * 3 2 1 32 32 H 1.09002 * 109.72754 * 170.47128 * 4 2 1 33 33 H 1.08998 * 109.72375 * 291.09767 * 4 2 1 34 34 H 1.09008 * 108.45437 * 205.85374 * 5 4 2 35 35 H 1.09000 * 108.45658 * 323.19464 * 5 4 2 36 36 H 1.09001 * 107.76556 * 192.10691 * 6 5 4 37 37 H 1.08998 * 107.69398 * 76.36579 * 6 5 4 38 38 H 1.09006 * 109.46383 * 299.99380 * 10 8 7 39 39 H 1.08998 * 109.47285 * 59.99692 * 10 8 7 40 40 H 1.08001 * 120.02421 * 359.97438 * 13 12 11 41 41 H 1.07994 * 119.96919 * 180.27416 * 14 13 12 42 42 H 1.08004 * 119.94199 * 179.70434 * 15 14 13 43 43 H 1.09007 * 109.47207 * 125.02374 * 17 16 15 44 44 H 0.96696 * 114.00437 * 179.97438 * 18 17 16 45 45 H 1.07994 * 120.03189 * 179.97438 * 23 16 15 46 46 H 1.08997 * 109.90809 * 337.53291 * 24 7 6 47 47 H 1.09004 * 109.97040 * 216.42889 * 24 7 6 48 48 H 1.09001 * 109.04513 * 163.35044 * 25 24 7 49 49 H 1.09000 * 109.04663 * 44.46738 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.4830 1.7568 0.0000 4 6 2.4913 -0.8881 1.5430 5 6 1.7982 -2.2138 1.6348 6 6 2.4535 -3.3398 0.8074 7 7 2.8527 -3.0359 -0.5756 8 6 4.0678 -3.4434 -0.9925 9 8 4.4294 -3.2104 -2.1265 10 6 4.9772 -4.1886 -0.0498 11 8 6.1976 -4.5104 -0.7199 12 6 7.1341 -5.1875 -0.0049 13 6 6.8860 -5.5300 1.3163 14 6 7.8374 -6.2235 2.0393 15 6 9.0406 -6.5656 1.4508 16 6 9.2925 -6.2208 0.1356 17 6 10.6050 -6.5959 -0.5029 18 8 11.3365 -5.4101 -0.8203 19 14 11.5960 -7.6387 0.6809 20 1 11.8527 -6.8679 1.9240 21 1 10.8359 -8.8710 1.0106 22 1 12.8891 -8.0088 0.0514 23 6 8.3424 -5.5326 -0.5934 24 6 2.0222 -2.3328 -1.4999 25 6 2.4633 -0.8476 -1.4748 26 1 -0.3633 0.5150 0.8892 27 1 -0.3633 0.5127 -0.8907 28 1 -0.3634 -1.0276 0.0005 29 1 3.5730 1.7574 0.0005 30 1 2.1205 2.2700 -0.8906 31 1 2.1183 2.2708 0.8893 32 1 3.5680 -1.0404 1.4671 33 1 2.2655 -0.2929 2.4277 34 1 1.7766 -2.5202 2.6807 35 1 0.7702 -2.0900 1.2943 36 1 1.7571 -4.1777 0.7758 37 1 3.3421 -3.6714 1.3446 38 1 5.1922 -3.5639 0.8173 39 1 4.4889 -5.1070 0.2761 40 1 5.9481 -5.2584 1.7779 41 1 7.6429 -6.4942 3.0665 42 1 9.7850 -7.1035 2.0192 43 1 10.4166 -7.1617 -1.4154 44 1 12.1941 -5.5762 -1.2350 45 1 8.5398 -5.2632 -1.6204 46 1 0.9782 -2.4150 -1.1977 47 1 2.1514 -2.7416 -2.5021 48 1 2.0706 -0.3449 -2.3586 49 1 3.5521 -0.7996 -1.4942 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:36:33 Heat of formation + Delta-G solvation = -103.344691 kcal Electronic energy + Delta-G solvation = -27413.917451 eV Core-core repulsion = 23658.354744 eV Total energy + Delta-G solvation = -3755.562707 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.77709 -40.89352 -39.00800 -37.60041 -37.26215 -34.06960 -32.67601 -32.52589 -31.34144 -29.34730 -28.67484 -28.36237 -27.12769 -26.76847 -24.30428 -23.69971 -22.49260 -22.05734 -19.89633 -19.31472 -18.49982 -18.12772 -17.66004 -17.56957 -17.23806 -16.68890 -16.18891 -15.83560 -15.67715 -15.30038 -15.06531 -14.89143 -14.68827 -14.49326 -14.39847 -14.18565 -13.94430 -13.85814 -13.60625 -13.44493 -13.41575 -13.28683 -13.12939 -13.09550 -12.92910 -12.58628 -12.51884 -12.21381 -12.14012 -12.09293 -11.89655 -11.75273 -11.66585 -10.89599 -10.76225 -10.59319 -10.38415 -10.17351 -9.91769 -9.72539 -9.31282 0.18191 0.35622 1.13793 1.36938 1.46784 1.49609 1.53430 1.89995 1.90638 1.95057 2.03476 2.43184 2.61821 2.75242 3.26353 3.45748 3.74436 3.82326 3.85606 3.94472 3.98715 4.05784 4.12140 4.20806 4.25182 4.28708 4.34964 4.42417 4.48013 4.55987 4.64108 4.71384 4.75160 4.77047 4.87591 4.90199 4.94617 4.95783 5.01646 5.03728 5.20328 5.32218 5.33611 5.37738 5.42772 5.51682 5.54113 5.61909 5.67724 5.76384 6.13570 6.33367 6.78870 7.02121 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.454 4.454 2 Si 1.074 2.926 3 C -0.472 4.472 4 C -0.403 4.403 5 C -0.120 4.120 6 C 0.085 3.915 7 N -0.587 5.587 8 C 0.503 3.497 9 O -0.570 6.570 10 C 0.036 3.964 11 O -0.322 6.322 12 C 0.114 3.886 13 C -0.203 4.203 14 C -0.070 4.070 15 C -0.173 4.173 16 C -0.049 4.049 17 C -0.095 4.095 18 O -0.565 6.565 19 Si 0.994 3.006 20 H -0.264 1.264 21 H -0.253 1.253 22 H -0.257 1.257 23 C -0.146 4.146 24 C 0.127 3.873 25 C -0.468 4.468 26 H 0.074 0.926 27 H 0.064 0.936 28 H 0.079 0.921 29 H 0.057 0.943 30 H 0.061 0.939 31 H 0.073 0.927 32 H 0.067 0.933 33 H 0.089 0.911 34 H 0.098 0.902 35 H 0.075 0.925 36 H 0.091 0.909 37 H 0.095 0.905 38 H 0.122 0.878 39 H 0.126 0.874 40 H 0.163 0.837 41 H 0.163 0.837 42 H 0.135 0.865 43 H 0.089 0.911 44 H 0.398 0.602 45 H 0.118 0.882 46 H 0.113 0.887 47 H 0.055 0.945 48 H 0.079 0.921 49 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.988 -2.577 7.671 9.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.561 4.561 2 Si 1.264 2.736 3 C -0.577 4.577 4 C -0.489 4.489 5 C -0.158 4.158 6 C -0.036 4.036 7 N -0.320 5.320 8 C 0.291 3.709 9 O -0.449 6.449 10 C -0.042 4.042 11 O -0.236 6.236 12 C 0.069 3.931 13 C -0.221 4.221 14 C -0.088 4.088 15 C -0.191 4.191 16 C -0.049 4.049 17 C -0.204 4.204 18 O -0.374 6.374 19 Si 0.816 3.184 20 H -0.189 1.189 21 H -0.177 1.177 22 H -0.181 1.181 23 C -0.165 4.165 24 C 0.004 3.996 25 C -0.551 4.551 26 H 0.093 0.907 27 H 0.084 0.916 28 H 0.098 0.902 29 H 0.076 0.924 30 H 0.080 0.920 31 H 0.093 0.907 32 H 0.086 0.914 33 H 0.108 0.892 34 H 0.117 0.883 35 H 0.094 0.906 36 H 0.109 0.891 37 H 0.113 0.887 38 H 0.140 0.860 39 H 0.143 0.857 40 H 0.180 0.820 41 H 0.180 0.820 42 H 0.152 0.848 43 H 0.107 0.893 44 H 0.248 0.752 45 H 0.136 0.864 46 H 0.131 0.869 47 H 0.074 0.926 48 H 0.098 0.902 49 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -3.856 -2.626 7.657 8.967 hybrid contribution 0.460 0.458 -1.272 1.428 sum -3.396 -2.168 6.386 7.550 Atomic orbital electron populations 1.26243 1.20296 1.04991 1.04586 0.77957 0.66503 0.64223 0.64870 1.26409 1.05738 1.21269 1.04315 1.25622 1.04637 1.03538 1.15150 1.21073 1.00214 0.93459 1.01048 1.22310 1.02914 0.99188 0.79162 1.47161 1.14982 1.56075 1.13773 1.20618 0.82833 0.79589 0.87839 1.90748 1.74418 1.57503 1.22191 1.22874 0.83891 1.02288 0.95108 1.86129 1.25683 1.71118 1.40624 1.19205 0.89042 0.93305 0.91539 1.21606 1.03144 1.04613 0.92755 1.21275 0.91744 0.94779 1.00968 1.21209 0.99558 1.04156 0.94192 1.19329 0.94254 0.97322 0.94000 1.25019 0.94429 0.93988 1.06931 1.86471 1.36298 1.30529 1.84086 0.85076 0.78264 0.77206 0.77823 1.18897 1.17692 1.18112 1.20321 0.92154 1.02777 1.01278 1.20769 0.95337 0.90310 0.93187 1.27069 1.05795 1.03143 1.19055 0.90708 0.91650 0.90195 0.92387 0.91970 0.90744 0.91369 0.89209 0.88330 0.90618 0.89096 0.88698 0.86032 0.85691 0.81994 0.81990 0.84792 0.89277 0.75155 0.86354 0.86915 0.92628 0.90222 0.92804 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 2.77 8.35 113.37 0.95 3.72 16 2 Si 1.07 -5.86 10.48 68.60 0.72 -5.15 16 3 C -0.47 0.46 8.65 113.37 0.98 1.44 16 4 C -0.40 3.02 4.83 70.98 0.34 3.37 16 5 C -0.12 1.27 5.32 30.04 0.16 1.43 16 6 C 0.09 -0.79 5.83 86.71 0.51 -0.28 16 7 N -0.59 0.50 2.45 -822.72 -2.01 -1.52 16 8 C 0.50 3.20 7.27 87.66 0.64 3.84 16 9 O -0.57 -10.22 15.71 15.99 0.25 -9.97 16 10 C 0.04 0.01 3.50 71.24 0.25 0.26 16 11 O -0.32 -3.14 9.67 -73.39 -0.71 -3.85 16 12 C 0.11 0.81 6.69 22.51 0.15 0.96 16 13 C -0.20 -0.02 9.04 22.37 0.20 0.18 16 14 C -0.07 0.05 10.04 22.25 0.22 0.27 16 15 C -0.17 -0.48 8.66 22.28 0.19 -0.28 16 16 C -0.05 -0.29 5.38 -19.88 -0.11 -0.40 16 17 C -0.09 -0.18 2.79 71.24 0.20 0.02 16 18 O -0.56 -1.97 12.81 -148.98 -1.91 -3.88 16 19 Si 0.99 -0.80 25.14 68.60 1.72 0.93 16 20 H -0.26 -0.48 7.04 99.48 0.70 0.22 16 21 H -0.25 0.09 7.11 99.48 0.71 0.80 16 22 H -0.26 0.28 7.11 99.48 0.71 0.98 16 23 C -0.15 -1.36 9.62 22.37 0.22 -1.14 16 24 C 0.13 0.06 5.36 87.73 0.47 0.53 16 25 C -0.47 -0.46 4.47 72.65 0.32 -0.14 16 26 H 0.07 -0.48 7.96 -2.39 -0.02 -0.50 16 27 H 0.06 -0.30 7.96 -2.38 -0.02 -0.32 16 28 H 0.08 -0.64 6.53 -2.39 -0.02 -0.66 16 29 H 0.06 0.06 7.96 -2.39 -0.02 0.04 16 30 H 0.06 0.01 7.96 -2.39 -0.02 -0.01 16 31 H 0.07 -0.16 7.96 -2.39 -0.02 -0.18 16 32 H 0.07 -0.38 7.90 -2.39 -0.02 -0.40 16 33 H 0.09 -0.79 7.99 -2.39 -0.02 -0.81 16 34 H 0.10 -1.31 8.14 -2.38 -0.02 -1.32 16 35 H 0.08 -0.90 5.94 -2.39 -0.01 -0.91 16 36 H 0.09 -1.13 8.14 -2.39 -0.02 -1.15 16 37 H 0.09 -1.21 5.49 -2.39 -0.01 -1.23 16 38 H 0.12 -0.70 6.95 -2.38 -0.02 -0.71 16 39 H 0.13 -0.82 7.47 -2.39 -0.02 -0.84 16 40 H 0.16 -1.22 6.30 -2.91 -0.02 -1.24 16 41 H 0.16 -1.18 8.06 -2.91 -0.02 -1.21 16 42 H 0.13 -0.05 4.86 -2.91 -0.01 -0.07 16 43 H 0.09 -0.11 7.96 -2.38 -0.02 -0.12 16 44 H 0.40 -2.42 8.74 -74.06 -0.65 -3.07 16 45 H 0.12 1.33 8.06 -2.91 -0.02 1.31 16 46 H 0.11 -0.68 7.14 -2.39 -0.02 -0.70 16 47 H 0.06 0.35 7.46 -2.39 -0.02 0.33 16 48 H 0.08 0.10 7.89 -2.39 -0.02 0.08 16 49 H 0.05 0.37 7.28 -2.39 -0.02 0.36 16 Total: 0.00 -25.79 381.45 4.80 -20.98 By element: Atomic # 1 Polarization: -12.37 SS G_CDS: 1.05 Total: -11.32 kcal Atomic # 6 Polarization: 8.07 SS G_CDS: 5.69 Total: 13.76 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -2.01 Total: -1.52 kcal Atomic # 8 Polarization: -15.33 SS G_CDS: -2.37 Total: -17.69 kcal Atomic # 14 Polarization: -6.66 SS G_CDS: 2.44 Total: -4.22 kcal Total: -25.79 4.80 -20.98 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.362 kcal (2) G-P(sol) polarization free energy of solvation -25.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds