Wall clock time and date at job start Thu Mar 4 2021 18:36:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35987 * 117.00207 * 2 1 4 4 C 1.38670 * 119.99723 * 0.02562 * 3 2 1 5 5 C 1.38156 * 119.99614 * 179.74485 * 4 3 2 6 6 C 1.38670 * 120.00021 * 0.51217 * 5 4 3 7 7 O 1.35987 * 120.00060 * 179.74483 * 6 5 4 8 8 C 1.42900 * 116.99811 * 359.71890 * 7 6 5 9 9 C 1.50705 * 109.47097 * 180.02562 * 8 7 6 10 10 O 1.21284 * 119.99762 * 0.02562 * 9 8 7 11 11 N 1.34772 * 120.00258 * 179.97438 * 9 8 7 12 12 C 1.47121 * 118.22834 * 359.97438 * 11 9 8 13 13 C 1.54333 * 117.93537 * 134.72079 * 12 11 9 14 14 C 1.49874 * 114.58760 * 314.26075 * 13 12 11 15 15 Si 1.88799 * 108.19207 * 84.45359 * 14 13 12 16 16 C 1.86294 * 109.44147 * 50.78233 * 15 14 13 17 17 C 1.86303 * 109.43970 * 170.70683 * 15 14 13 18 18 C 1.80385 * 109.65438 * 290.72505 * 15 14 13 19 19 C 1.42774 * 118.23468 * 179.97438 * 11 9 8 20 20 C 1.38721 * 119.99987 * 359.46521 * 6 5 4 21 21 C 1.50698 * 119.99809 * 180.25343 * 20 6 5 22 22 O 1.42898 * 109.47546 * 285.00074 * 21 20 6 23 23 Si 1.86305 * 109.46861 * 165.00376 * 21 20 6 24 24 H 1.48498 * 109.47241 * 59.99735 * 23 21 20 25 25 H 1.48500 * 109.46993 * 180.02562 * 23 21 20 26 26 H 1.48500 * 109.46897 * 299.99741 * 23 21 20 27 27 C 1.38106 * 119.99865 * 0.28126 * 20 6 5 28 28 H 1.09005 * 109.47438 * 180.02562 * 1 2 3 29 29 H 1.09007 * 109.47102 * 300.00435 * 1 2 3 30 30 H 1.08998 * 109.46887 * 60.00218 * 1 2 3 31 31 H 1.08001 * 120.00152 * 0.02749 * 4 3 2 32 32 H 1.08008 * 119.99892 * 180.25416 * 5 4 3 33 33 H 1.09006 * 109.47024 * 60.01085 * 8 7 6 34 34 H 1.08998 * 109.47278 * 300.00386 * 8 7 6 35 35 H 1.09001 * 107.74717 * 256.88400 * 12 11 9 36 36 H 1.08998 * 107.75494 * 12.64683 * 12 11 9 37 37 H 1.09008 * 108.52362 * 192.89856 * 13 12 11 38 38 H 1.09000 * 108.41266 * 75.54381 * 13 12 11 39 39 H 1.09002 * 109.72672 * 324.76412 * 14 13 12 40 40 H 1.08998 * 109.72499 * 204.13747 * 14 13 12 41 41 H 1.08996 * 109.47250 * 60.00292 * 16 15 14 42 42 H 1.09005 * 109.46871 * 180.02562 * 16 15 14 43 43 H 1.08999 * 109.47512 * 299.99645 * 16 15 14 44 44 H 1.09003 * 109.46999 * 59.99839 * 17 15 14 45 45 H 1.08997 * 109.47108 * 179.97438 * 17 15 14 46 46 H 1.08996 * 109.47097 * 299.99878 * 17 15 14 47 47 H 1.09001 * 109.04528 * 178.31960 * 18 15 14 48 48 H 1.09000 * 109.04633 * 297.20257 * 18 15 14 49 49 H 1.08997 * 109.90809 * 157.52091 * 19 11 9 50 50 H 1.09004 * 109.97040 * 36.41688 * 19 11 9 51 51 H 1.09001 * 109.47394 * 45.00299 * 21 20 6 52 52 H 0.96704 * 113.99809 * 59.99886 * 22 21 20 53 53 H 1.07999 * 119.99827 * 179.97438 * 27 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 1.2911 2.3746 0.0005 5 6 1.9184 3.6055 0.0059 6 6 3.3031 3.6781 -0.0001 7 8 3.9206 4.8897 -0.0001 8 6 3.0806 6.0458 0.0000 9 6 3.9348 7.2874 -0.0007 10 8 5.1439 7.1916 -0.0016 11 7 3.3553 8.5041 -0.0013 12 6 1.8858 8.5750 -0.0019 13 6 1.2095 9.5684 0.9664 14 6 1.7568 9.5501 2.3615 15 14 3.2760 10.6700 2.4133 16 6 2.8501 12.3272 1.6765 17 6 3.8180 10.8982 4.1811 18 6 4.6160 9.9189 1.4677 19 6 4.2005 9.6548 -0.0013 20 6 4.0587 2.5147 -0.0001 21 6 5.5636 2.5936 -0.0008 22 8 6.0205 2.9664 -1.3024 23 14 6.2727 0.9318 0.4538 24 1 5.8297 -0.0829 -0.5358 25 1 7.7556 1.0097 0.4537 26 1 5.7979 0.5443 1.8065 27 6 3.4316 1.2842 -0.0002 28 1 -0.3634 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 0.2126 2.3181 0.0014 32 1 1.3301 4.5114 0.0104 33 1 2.4515 6.0378 0.8901 34 1 2.4513 6.0377 -0.8899 35 1 1.5657 8.8260 -1.0131 36 1 1.5049 7.5793 0.2256 37 1 0.1448 9.3386 1.0104 38 1 1.3250 10.5746 0.5635 39 1 2.0401 8.5330 2.6323 40 1 1.0035 9.9197 3.0571 41 1 2.0428 12.7830 2.2496 42 1 3.7271 12.9739 1.7058 43 1 2.5317 12.1941 0.6426 44 1 4.0660 9.9287 4.6131 45 1 4.6953 11.5443 4.2116 46 1 3.0101 11.3548 4.7528 47 1 5.4773 10.5868 1.4792 48 1 4.8942 8.9738 1.9340 49 1 3.6571 10.5144 -0.3936 50 1 5.0856 9.4666 -0.6091 51 1 5.8887 3.3384 0.7256 52 1 5.6897 3.8233 -1.6048 53 1 4.0198 0.3784 -0.0006 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:36:46 Heat of formation + Delta-G solvation = -140.548811 kcal Electronic energy + Delta-G solvation = -32361.530849 eV Core-core repulsion = 28130.135040 eV Total energy + Delta-G solvation = -4231.395809 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.92383 -41.21510 -39.94912 -38.22688 -37.51036 -36.92638 -34.05035 -32.88643 -32.39690 -30.83425 -29.38175 -28.73992 -28.36063 -27.96065 -27.09323 -26.60041 -24.57503 -23.32092 -22.46787 -22.26749 -19.94388 -19.61813 -18.89401 -18.26139 -18.06850 -17.67051 -17.54576 -17.02317 -16.65645 -16.29027 -16.14928 -15.68829 -15.60876 -15.45604 -15.24259 -14.90638 -14.83207 -14.42116 -14.28517 -14.10155 -14.08909 -13.92779 -13.60342 -13.51423 -13.44145 -13.38877 -13.15008 -13.10599 -13.00888 -12.90752 -12.56472 -12.52689 -12.29526 -12.27015 -12.13082 -11.83664 -11.74094 -11.45663 -11.23966 -11.11657 -10.83939 -10.75581 -10.58011 -10.16673 -10.11927 -9.69019 -8.83873 0.04136 0.31592 1.14119 1.41443 1.43997 1.48089 1.49670 1.89802 1.91352 1.95791 2.03505 2.31568 2.45524 2.53210 2.76028 3.28979 3.52561 3.69090 3.80514 3.86911 3.91660 4.02735 4.07106 4.11158 4.14716 4.20999 4.27833 4.33119 4.36863 4.41714 4.42470 4.43874 4.58028 4.67435 4.72406 4.76040 4.76285 4.77354 4.87729 4.90791 4.95141 4.96861 5.03441 5.04445 5.10958 5.18289 5.34922 5.38808 5.40009 5.52441 5.55525 5.65525 5.76848 6.10466 6.26306 6.42348 6.55177 7.06503 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.339 6.339 3 C 0.089 3.911 4 C -0.159 4.159 5 C -0.157 4.157 6 C 0.095 3.905 7 O -0.313 6.313 8 C 0.035 3.965 9 C 0.504 3.496 10 O -0.565 6.565 11 N -0.588 5.588 12 C 0.086 3.914 13 C -0.121 4.121 14 C -0.402 4.402 15 Si 1.073 2.927 16 C -0.455 4.455 17 C -0.473 4.473 18 C -0.466 4.466 19 C 0.128 3.872 20 C -0.116 4.116 21 C -0.089 4.089 22 O -0.549 6.549 23 Si 1.035 2.965 24 H -0.260 1.260 25 H -0.271 1.271 26 H -0.239 1.239 27 C -0.137 4.137 28 H 0.113 0.887 29 H 0.069 0.931 30 H 0.068 0.932 31 H 0.163 0.837 32 H 0.170 0.830 33 H 0.122 0.878 34 H 0.124 0.876 35 H 0.089 0.911 36 H 0.096 0.904 37 H 0.097 0.903 38 H 0.073 0.927 39 H 0.070 0.930 40 H 0.088 0.912 41 H 0.073 0.927 42 H 0.064 0.936 43 H 0.079 0.921 44 H 0.058 0.942 45 H 0.060 0.940 46 H 0.072 0.928 47 H 0.078 0.922 48 H 0.055 0.945 49 H 0.110 0.890 50 H 0.056 0.944 51 H 0.077 0.923 52 H 0.375 0.625 53 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.594 4.424 0.877 12.441 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.253 6.253 3 C 0.044 3.956 4 C -0.177 4.177 5 C -0.175 4.175 6 C 0.050 3.950 7 O -0.226 6.226 8 C -0.042 4.042 9 C 0.292 3.708 10 O -0.443 6.443 11 N -0.321 5.321 12 C -0.035 4.035 13 C -0.159 4.159 14 C -0.488 4.488 15 Si 1.264 2.736 16 C -0.563 4.563 17 C -0.578 4.578 18 C -0.549 4.549 19 C 0.005 3.995 20 C -0.117 4.117 21 C -0.196 4.196 22 O -0.356 6.356 23 Si 0.856 3.144 24 H -0.184 1.184 25 H -0.196 1.196 26 H -0.162 1.162 27 C -0.156 4.156 28 H 0.131 0.869 29 H 0.088 0.912 30 H 0.086 0.914 31 H 0.181 0.819 32 H 0.187 0.813 33 H 0.140 0.860 34 H 0.142 0.858 35 H 0.107 0.893 36 H 0.114 0.886 37 H 0.116 0.884 38 H 0.092 0.908 39 H 0.088 0.912 40 H 0.107 0.893 41 H 0.092 0.908 42 H 0.083 0.917 43 H 0.098 0.902 44 H 0.077 0.923 45 H 0.080 0.920 46 H 0.092 0.908 47 H 0.097 0.903 48 H 0.074 0.926 49 H 0.128 0.872 50 H 0.075 0.925 51 H 0.095 0.905 52 H 0.223 0.777 53 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -10.021 2.887 1.114 10.488 hybrid contribution -0.139 1.186 -0.039 1.195 sum -10.161 4.073 1.075 10.999 Atomic orbital electron populations 1.23363 0.76229 1.05576 1.02528 1.86080 1.23593 1.26611 1.89018 1.18971 0.91826 0.85443 0.99349 1.21408 1.01600 0.90766 1.03975 1.21393 0.92093 0.99953 1.04103 1.18731 0.91650 0.84193 1.00395 1.86099 1.35445 1.11771 1.89307 1.22869 0.92802 0.82151 1.06422 1.20581 0.88212 0.85593 0.76400 1.90759 1.16534 1.87065 1.49987 1.47148 1.08052 1.04698 1.72212 1.22284 0.76392 1.03021 1.01797 1.21073 1.01077 1.00048 0.93662 1.25605 1.14144 1.09722 0.99346 0.77967 0.65221 0.66446 0.63986 1.26268 1.05358 1.17177 1.07468 1.26417 1.05796 1.04018 1.21541 1.27032 1.16186 1.07285 1.04425 1.20739 0.94597 0.88214 0.95988 1.19413 0.96375 0.90703 1.05246 1.25298 0.92324 1.13428 0.88563 1.86632 1.74210 1.42496 1.32263 0.84208 0.78190 0.72299 0.79736 1.18434 1.19636 1.16207 1.20279 0.92891 0.97237 1.05146 0.86895 0.91227 0.91356 0.81913 0.81289 0.86050 0.85815 0.89266 0.88568 0.88414 0.90800 0.91163 0.89333 0.90820 0.91725 0.90245 0.92279 0.92036 0.90848 0.90334 0.92555 0.87205 0.92516 0.90482 0.77651 0.84740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.34 -1.42 10.50 -93.41 -0.98 -2.40 16 3 C 0.09 0.40 6.69 22.49 0.15 0.55 16 4 C -0.16 0.21 9.03 22.35 0.20 0.42 16 5 C -0.16 0.36 9.03 22.35 0.20 0.56 16 6 C 0.10 0.35 6.62 22.49 0.15 0.50 16 7 O -0.31 -1.45 8.57 -74.37 -0.64 -2.08 16 8 C 0.04 -0.12 3.50 71.24 0.25 0.13 16 9 C 0.50 1.55 7.27 87.66 0.64 2.19 16 10 O -0.57 -7.97 15.71 15.99 0.25 -7.72 16 11 N -0.59 1.81 2.45 -822.76 -2.02 -0.21 16 12 C 0.09 -0.95 5.83 86.71 0.51 -0.44 16 13 C -0.12 1.43 5.32 30.04 0.16 1.59 16 14 C -0.40 3.56 4.83 70.98 0.34 3.91 16 15 Si 1.07 -7.04 10.48 68.60 0.72 -6.32 16 16 C -0.46 3.06 8.35 113.37 0.95 4.01 16 17 C -0.47 0.92 8.65 113.37 0.98 1.90 16 18 C -0.47 0.26 4.47 72.64 0.32 0.59 16 19 C 0.13 -0.15 5.36 87.72 0.47 0.32 16 20 C -0.12 -0.82 5.27 -19.78 -0.10 -0.92 16 21 C -0.09 -0.73 2.33 71.24 0.17 -0.56 16 22 O -0.55 -5.79 12.65 -148.98 -1.89 -7.68 16 23 Si 1.04 6.95 25.75 68.60 1.77 8.71 16 24 H -0.26 -2.04 6.73 99.48 0.67 -1.37 16 25 H -0.27 -2.41 7.11 99.48 0.71 -1.71 16 26 H -0.24 -1.16 7.11 99.48 0.71 -0.46 16 27 C -0.14 -0.97 8.59 22.35 0.19 -0.78 16 28 H 0.11 -0.82 8.14 -2.38 -0.02 -0.84 16 29 H 0.07 -0.53 7.66 -2.38 -0.02 -0.54 16 30 H 0.07 -0.50 7.66 -2.39 -0.02 -0.52 16 31 H 0.16 -1.23 6.29 -2.91 -0.02 -1.25 16 32 H 0.17 -1.77 6.29 -2.91 -0.02 -1.79 16 33 H 0.12 -1.12 6.95 -2.38 -0.02 -1.14 16 34 H 0.12 -1.21 7.46 -2.39 -0.02 -1.23 16 35 H 0.09 -1.23 8.14 -2.39 -0.02 -1.25 16 36 H 0.10 -1.44 5.49 -2.39 -0.01 -1.45 16 37 H 0.10 -1.41 8.14 -2.38 -0.02 -1.43 16 38 H 0.07 -0.94 5.94 -2.39 -0.01 -0.96 16 39 H 0.07 -0.52 7.90 -2.39 -0.02 -0.54 16 40 H 0.09 -0.87 7.99 -2.39 -0.02 -0.89 16 41 H 0.07 -0.51 7.96 -2.39 -0.02 -0.53 16 42 H 0.06 -0.32 7.96 -2.38 -0.02 -0.34 16 43 H 0.08 -0.68 6.53 -2.39 -0.02 -0.70 16 44 H 0.06 -0.02 7.96 -2.39 -0.02 -0.03 16 45 H 0.06 -0.04 7.96 -2.39 -0.02 -0.06 16 46 H 0.07 -0.22 7.96 -2.39 -0.02 -0.24 16 47 H 0.08 0.01 7.89 -2.39 -0.02 -0.01 16 48 H 0.06 0.28 7.28 -2.39 -0.02 0.26 16 49 H 0.11 -0.78 7.14 -2.39 -0.02 -0.80 16 50 H 0.06 0.25 7.46 -2.39 -0.02 0.24 16 51 H 0.08 0.63 7.82 -2.39 -0.02 0.61 16 52 H 0.37 2.85 8.60 -74.05 -0.64 2.21 16 53 H 0.14 0.94 4.89 -2.91 -0.01 0.92 16 Total: 0.00 -23.46 409.51 4.91 -18.55 By element: Atomic # 1 Polarization: -16.83 SS G_CDS: 1.00 Total: -15.83 kcal Atomic # 6 Polarization: 8.28 SS G_CDS: 6.69 Total: 14.97 kcal Atomic # 7 Polarization: 1.81 SS G_CDS: -2.02 Total: -0.21 kcal Atomic # 8 Polarization: -16.63 SS G_CDS: -3.25 Total: -19.88 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: 2.49 Total: 2.39 kcal Total: -23.46 4.91 -18.55 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.998 kcal (2) G-P(sol) polarization free energy of solvation -23.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.906 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.551 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.549 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds