Wall clock time and date at job start Thu Mar 4 2021 18:37:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35901 * 117.00181 * 2 1 4 4 C 1.38757 * 120.02467 * 359.97438 * 3 2 1 5 5 C 1.38190 * 120.05540 * 180.02562 * 4 3 2 6 6 C 1.38163 * 120.10898 * 0.02562 * 5 4 3 7 7 C 1.50700 * 119.97200 * 179.97438 * 6 5 4 8 8 O 1.42903 * 109.46678 * 105.02223 * 7 6 5 9 9 Si 1.86295 * 109.47269 * 345.02793 * 7 6 5 10 10 H 1.48503 * 109.47568 * 59.99695 * 9 7 6 11 11 H 1.48501 * 109.47405 * 179.97438 * 9 7 6 12 12 H 1.48504 * 109.47239 * 299.99810 * 9 7 6 13 13 C 1.38791 * 120.05219 * 0.02562 * 6 5 4 14 14 O 1.35900 * 120.02510 * 179.97438 * 13 6 5 15 15 C 1.42900 * 116.99839 * 179.97438 * 14 13 6 16 16 C 1.50705 * 109.47097 * 179.97438 * 15 14 13 17 17 O 1.21284 * 119.99762 * 0.02562 * 16 15 14 18 18 N 1.34772 * 120.00258 * 179.97438 * 16 15 14 19 19 C 1.47121 * 118.22834 * 359.97438 * 18 16 15 20 20 C 1.54333 * 117.93537 * 134.72079 * 19 18 16 21 21 C 1.49874 * 114.58760 * 314.26075 * 20 19 18 22 22 Si 1.88799 * 108.19207 * 84.45359 * 21 20 19 23 23 C 1.86294 * 109.44147 * 50.78233 * 22 21 20 24 24 C 1.86303 * 109.43970 * 170.70683 * 22 21 20 25 25 C 1.80385 * 109.65438 * 290.72505 * 22 21 20 26 26 C 1.42774 * 118.23468 * 179.97438 * 18 16 15 27 27 C 1.38614 * 119.94847 * 0.22323 * 13 6 5 28 28 H 1.09003 * 109.47386 * 60.00257 * 1 2 3 29 29 H 1.08999 * 109.47258 * 180.02562 * 1 2 3 30 30 H 1.09008 * 109.47017 * 300.00018 * 1 2 3 31 31 H 1.08001 * 119.97090 * 0.02562 * 4 3 2 32 32 H 1.07998 * 119.94981 * 179.97438 * 5 4 3 33 33 H 1.08998 * 109.47621 * 225.02327 * 7 6 5 34 34 H 0.96698 * 114.00201 * 300.00111 * 8 7 6 35 35 H 1.09006 * 109.47024 * 60.00771 * 15 14 13 36 36 H 1.08998 * 109.47278 * 300.00071 * 15 14 13 37 37 H 1.09001 * 107.74717 * 256.88400 * 19 18 16 38 38 H 1.08998 * 107.75494 * 12.64683 * 19 18 16 39 39 H 1.09008 * 108.52362 * 192.89856 * 20 19 18 40 40 H 1.09000 * 108.41266 * 75.54381 * 20 19 18 41 41 H 1.09002 * 109.72672 * 324.76412 * 21 20 19 42 42 H 1.08998 * 109.72499 * 204.13747 * 21 20 19 43 43 H 1.08996 * 109.47250 * 60.00292 * 23 22 21 44 44 H 1.09005 * 109.46871 * 180.02562 * 23 22 21 45 45 H 1.08999 * 109.47512 * 299.99645 * 23 22 21 46 46 H 1.09003 * 109.46999 * 59.99839 * 24 22 21 47 47 H 1.08997 * 109.47108 * 179.97438 * 24 22 21 48 48 H 1.08996 * 109.47097 * 299.99878 * 24 22 21 49 49 H 1.09001 * 109.04528 * 178.31960 * 25 22 21 50 50 H 1.09000 * 109.04633 * 297.20257 * 25 22 21 51 51 H 1.08997 * 109.90809 * 157.52091 * 26 18 16 52 52 H 1.09004 * 109.97040 * 36.41688 * 26 18 16 53 53 H 1.07993 * 120.05561 * 179.74988 * 27 13 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2908 2.3749 -0.0005 5 6 1.9175 3.6065 -0.0011 6 6 3.2971 3.6822 -0.0016 7 6 3.9774 5.0269 -0.0028 8 8 4.5044 5.2951 1.2981 9 14 2.7435 6.3467 -0.4570 10 1 1.6373 6.3524 0.5338 11 1 3.4137 7.6719 -0.4576 12 1 2.1956 6.0680 -1.8089 13 6 4.0569 2.5207 -0.0021 14 8 5.4138 2.5957 -0.0032 15 6 6.1318 1.3602 -0.0031 16 6 7.6127 1.6398 -0.0050 17 8 8.0137 2.7845 -0.0058 18 7 8.4915 0.6180 -0.0048 19 6 7.9624 -0.7548 -0.0020 20 6 8.5963 -1.7759 -0.9703 21 6 8.7986 -1.2691 -2.3662 22 14 10.4368 -0.3322 -2.4214 23 6 11.7817 -1.3907 -1.6856 24 6 10.8620 0.0696 -4.1902 25 6 10.2928 1.1979 -1.4770 26 6 9.8856 0.9260 -0.0072 27 6 3.4306 1.2841 -0.0068 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 0.2123 2.3184 -0.0005 32 1 1.3281 4.5115 -0.0019 33 1 4.7893 5.0228 -0.7300 34 1 3.8364 5.3139 1.9970 35 1 5.8695 0.7875 -0.8928 36 1 5.8708 0.7883 0.8873 37 1 8.0641 -1.1481 1.0094 38 1 6.8974 -0.7010 -0.2279 39 1 7.9558 -2.6569 -1.0125 40 1 9.5639 -2.0764 -0.5686 41 1 7.9823 -0.5992 -2.6363 42 1 8.8312 -2.1083 -3.0610 43 1 11.8715 -2.3140 -2.2579 44 1 12.7276 -0.8500 -1.7168 45 1 11.5329 -1.6272 -0.6511 46 1 10.0747 0.6879 -4.6216 47 1 11.8074 0.6110 -4.2226 48 1 10.9522 -0.8545 -4.7611 49 1 11.2518 1.7158 -1.4905 50 1 9.5400 1.8339 -1.9428 51 1 10.4528 0.0820 0.3851 52 1 10.0720 1.8122 0.5995 53 1 4.0200 0.3793 -0.0113 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_4974312.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:37:01 Heat of formation + Delta-G solvation = -137.907954 kcal Electronic energy + Delta-G solvation = -32446.256653 eV Core-core repulsion = 28214.975359 eV Total energy + Delta-G solvation = -4231.281293 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.94639 -41.22697 -39.94664 -38.40471 -37.53732 -36.92777 -34.07130 -32.57410 -32.25146 -31.18939 -29.40745 -28.74869 -28.36283 -28.33981 -27.11802 -26.12408 -24.58795 -23.28599 -22.54276 -22.29045 -20.04686 -19.95335 -18.45948 -18.20922 -17.86737 -17.68382 -17.27687 -16.92796 -16.70077 -16.58848 -16.21553 -15.87336 -15.68453 -15.30625 -15.19072 -15.04538 -14.86028 -14.59820 -14.40484 -14.16276 -13.94339 -13.91715 -13.58449 -13.47797 -13.40892 -13.31409 -13.18813 -13.12140 -13.07850 -12.91994 -12.58256 -12.50089 -12.27012 -12.20359 -12.15805 -11.98018 -11.76789 -11.64772 -11.59214 -10.88683 -10.75930 -10.58800 -10.33447 -10.17789 -9.73018 -9.71229 -9.12005 0.16934 0.28068 1.16411 1.38255 1.40872 1.45632 1.52085 1.89752 1.91222 1.95662 2.03450 2.21582 2.44544 2.54768 2.75375 3.26774 3.59726 3.67415 3.76218 3.83963 3.89286 3.96362 4.04010 4.11237 4.14589 4.24459 4.32442 4.34306 4.38771 4.40656 4.41261 4.44533 4.56671 4.66079 4.71104 4.75655 4.77329 4.77608 4.87775 4.90441 4.94180 4.99372 5.01200 5.02679 5.20734 5.24231 5.33634 5.36759 5.43934 5.51724 5.54654 5.64752 5.75905 6.08067 6.22945 6.36146 6.78804 7.03556 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.165 3.835 4 C -0.238 4.238 5 C -0.049 4.049 6 C -0.200 4.200 7 C -0.076 4.076 8 O -0.555 6.555 9 Si 0.991 3.009 10 H -0.231 1.231 11 H -0.280 1.280 12 H -0.252 1.252 13 C 0.178 3.822 14 O -0.301 6.301 15 C 0.034 3.966 16 C 0.505 3.495 17 O -0.563 6.563 18 N -0.588 5.588 19 C 0.086 3.914 20 C -0.120 4.120 21 C -0.404 4.404 22 Si 1.074 2.926 23 C -0.453 4.453 24 C -0.471 4.471 25 C -0.467 4.467 26 C 0.128 3.872 27 C -0.251 4.251 28 H 0.068 0.932 29 H 0.117 0.883 30 H 0.068 0.932 31 H 0.157 0.843 32 H 0.151 0.849 33 H 0.094 0.906 34 H 0.384 0.616 35 H 0.120 0.880 36 H 0.119 0.881 37 H 0.089 0.911 38 H 0.091 0.909 39 H 0.096 0.904 40 H 0.076 0.924 41 H 0.067 0.933 42 H 0.089 0.911 43 H 0.074 0.926 44 H 0.065 0.935 45 H 0.078 0.922 46 H 0.057 0.943 47 H 0.062 0.938 48 H 0.073 0.927 49 H 0.080 0.920 50 H 0.054 0.946 51 H 0.112 0.888 52 H 0.055 0.945 53 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.636 -8.449 0.062 9.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.119 3.881 4 C -0.257 4.257 5 C -0.067 4.067 6 C -0.201 4.201 7 C -0.185 4.185 8 O -0.362 6.362 9 Si 0.813 3.187 10 H -0.154 1.154 11 H -0.205 1.205 12 H -0.176 1.176 13 C 0.132 3.868 14 O -0.214 6.214 15 C -0.044 4.044 16 C 0.292 3.708 17 O -0.441 6.441 18 N -0.321 5.321 19 C -0.035 4.035 20 C -0.157 4.157 21 C -0.490 4.490 22 Si 1.264 2.736 23 C -0.561 4.561 24 C -0.576 4.576 25 C -0.550 4.550 26 C 0.004 3.996 27 C -0.270 4.270 28 H 0.086 0.914 29 H 0.136 0.864 30 H 0.086 0.914 31 H 0.175 0.825 32 H 0.168 0.832 33 H 0.112 0.888 34 H 0.233 0.767 35 H 0.137 0.863 36 H 0.137 0.863 37 H 0.107 0.893 38 H 0.109 0.891 39 H 0.115 0.885 40 H 0.095 0.905 41 H 0.086 0.914 42 H 0.108 0.892 43 H 0.093 0.907 44 H 0.084 0.916 45 H 0.097 0.903 46 H 0.077 0.923 47 H 0.081 0.919 48 H 0.093 0.907 49 H 0.099 0.901 50 H 0.073 0.927 51 H 0.130 0.870 52 H 0.074 0.926 53 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -4.242 -7.214 -0.457 8.382 hybrid contribution 0.010 0.079 0.196 0.212 sum -4.232 -7.135 -0.261 8.300 Atomic orbital electron populations 1.23403 0.76035 1.05745 1.02617 1.86055 1.23709 1.26437 1.87924 1.18843 0.91624 0.84951 0.92706 1.21387 1.01605 0.91277 1.11408 1.20933 0.92170 0.98847 0.94747 1.19700 0.93449 0.94446 1.12542 1.24981 1.05919 0.98911 0.88684 1.86565 1.38898 1.93724 1.16969 0.85187 0.76631 0.75830 0.81099 1.15392 1.20548 1.17575 1.18576 0.81756 0.93161 0.93348 1.86235 1.15466 1.31640 1.88025 1.22870 0.89003 0.86406 1.06133 1.20522 0.88595 0.85145 0.76492 1.90763 1.80590 1.22932 1.49856 1.47141 1.06084 1.06590 1.72241 1.22280 0.99378 0.79961 1.01887 1.21067 1.03170 0.97815 0.93692 1.25642 1.15799 1.08315 0.99260 0.77959 0.67406 0.64035 0.64162 1.26240 1.12600 1.09826 1.07439 1.26388 1.04728 1.05152 1.21335 1.27057 1.04124 1.19525 1.04297 1.20762 0.80589 1.02074 0.96129 1.20555 0.93380 0.97420 1.15640 0.91385 0.86429 0.91361 0.82538 0.83188 0.88788 0.76743 0.86256 0.86309 0.89271 0.89087 0.88530 0.90524 0.91437 0.89223 0.90703 0.91570 0.90259 0.92327 0.91889 0.90742 0.90147 0.92704 0.87000 0.92603 0.82861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.32 10.49 -92.44 -0.97 -1.29 16 3 C 0.17 0.39 6.68 22.49 0.15 0.54 16 4 C -0.24 -0.03 9.04 22.38 0.20 0.17 16 5 C -0.05 -0.07 8.65 22.24 0.19 0.13 16 6 C -0.20 -1.14 5.27 -19.75 -0.10 -1.24 16 7 C -0.08 -0.51 2.38 71.24 0.17 -0.34 16 8 O -0.55 -4.95 12.88 -148.98 -1.92 -6.86 16 9 Si 0.99 1.94 25.49 68.60 1.75 3.69 16 10 H -0.23 0.40 6.73 99.48 0.67 1.07 16 11 H -0.28 -1.76 7.11 99.48 0.71 -1.05 16 12 H -0.25 -0.54 7.11 99.48 0.71 0.17 16 13 C 0.18 1.22 6.66 22.49 0.15 1.37 16 14 O -0.30 -3.04 9.00 -73.39 -0.66 -3.70 16 15 C 0.03 0.07 3.50 71.24 0.25 0.32 16 16 C 0.50 3.82 7.27 87.66 0.64 4.46 16 17 O -0.56 -10.56 15.71 15.99 0.25 -10.31 16 18 N -0.59 -0.26 2.45 -822.76 -2.02 -2.28 16 19 C 0.09 -0.64 5.83 86.71 0.51 -0.13 16 20 C -0.12 1.09 5.32 30.04 0.16 1.25 16 21 C -0.40 2.63 4.83 70.98 0.34 2.97 16 22 Si 1.07 -5.26 10.48 68.60 0.72 -4.54 16 23 C -0.45 2.53 8.35 113.37 0.95 3.48 16 24 C -0.47 0.37 8.65 113.37 0.98 1.36 16 25 C -0.47 -0.71 4.47 72.64 0.32 -0.38 16 26 C 0.13 0.18 5.36 87.72 0.47 0.65 16 27 C -0.25 -0.76 8.97 22.46 0.20 -0.56 16 28 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 29 H 0.12 -1.09 8.14 -2.39 -0.02 -1.11 16 30 H 0.07 -0.54 7.66 -2.38 -0.02 -0.55 16 31 H 0.16 -0.81 6.29 -2.91 -0.02 -0.83 16 32 H 0.15 -0.44 4.88 -2.91 -0.01 -0.45 16 33 H 0.09 0.96 7.82 -2.39 -0.02 0.94 16 34 H 0.38 0.14 8.70 -74.06 -0.64 -0.50 16 35 H 0.12 -0.42 6.95 -2.38 -0.02 -0.44 16 36 H 0.12 -0.40 7.46 -2.39 -0.02 -0.42 16 37 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 38 H 0.09 -0.93 5.49 -2.39 -0.01 -0.94 16 39 H 0.10 -1.11 8.14 -2.38 -0.02 -1.13 16 40 H 0.08 -0.82 5.94 -2.39 -0.01 -0.83 16 41 H 0.07 -0.31 7.90 -2.39 -0.02 -0.32 16 42 H 0.09 -0.71 7.99 -2.39 -0.02 -0.72 16 43 H 0.07 -0.45 7.96 -2.39 -0.02 -0.47 16 44 H 0.07 -0.28 7.96 -2.38 -0.02 -0.29 16 45 H 0.08 -0.58 6.53 -2.39 -0.02 -0.60 16 46 H 0.06 0.06 7.96 -2.39 -0.02 0.04 16 47 H 0.06 0.01 7.96 -2.39 -0.02 -0.01 16 48 H 0.07 -0.15 7.96 -2.39 -0.02 -0.17 16 49 H 0.08 0.13 7.89 -2.39 -0.02 0.12 16 50 H 0.05 0.40 7.28 -2.39 -0.02 0.38 16 51 H 0.11 -0.56 7.14 -2.39 -0.02 -0.58 16 52 H 0.06 0.40 7.46 -2.39 -0.02 0.38 16 53 H 0.15 -0.24 6.30 -2.91 -0.02 -0.26 16 Total: 0.00 -25.19 410.09 4.84 -20.35 By element: Atomic # 1 Polarization: -11.08 SS G_CDS: 0.99 Total: -10.09 kcal Atomic # 6 Polarization: 8.35 SS G_CDS: 6.69 Total: 15.04 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -2.02 Total: -2.28 kcal Atomic # 8 Polarization: -18.87 SS G_CDS: -3.30 Total: -22.16 kcal Atomic # 14 Polarization: -3.33 SS G_CDS: 2.47 Total: -0.86 kcal Total: -25.19 4.84 -20.35 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_4974312.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.559 kcal (2) G-P(sol) polarization free energy of solvation -25.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.747 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.349 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.908 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds