Wall clock time and date at job start Thu Mar 4 2021 18:41:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35997 * 117.00098 * 2 1 4 4 C 1.38524 * 120.07176 * 0.02562 * 3 2 1 5 5 C 1.38292 * 119.99702 * 179.97438 * 4 3 2 6 6 C 1.50693 * 119.92287 * 180.02562 * 5 4 3 7 7 O 1.42898 * 109.47431 * 300.00007 * 6 5 4 8 8 Si 1.86307 * 109.46943 * 180.02562 * 6 5 4 9 9 H 1.48499 * 109.47220 * 59.99821 * 8 6 5 10 10 H 1.48500 * 109.47032 * 180.02562 * 8 6 5 11 11 H 1.48497 * 109.46917 * 299.99858 * 8 6 5 12 12 C 1.38202 * 120.14593 * 359.97438 * 5 4 3 13 13 C 1.38286 * 120.14758 * 359.75896 * 12 5 4 14 14 C 1.38526 * 119.99962 * 0.51678 * 13 12 5 15 15 O 1.35994 * 120.07150 * 179.74227 * 14 13 12 16 16 C 1.42900 * 117.00089 * 359.71929 * 15 14 13 17 17 C 1.50705 * 109.47097 * 179.97438 * 16 15 14 18 18 O 1.21284 * 119.99762 * 0.02562 * 17 16 15 19 19 N 1.34772 * 120.00258 * 179.97438 * 17 16 15 20 20 C 1.47121 * 118.22834 * 359.97438 * 19 17 16 21 21 C 1.54333 * 117.93537 * 134.72079 * 20 19 17 22 22 C 1.49874 * 114.58760 * 314.26075 * 21 20 19 23 23 Si 1.88799 * 108.19207 * 84.45359 * 22 21 20 24 24 C 1.86294 * 109.44147 * 50.78233 * 23 22 21 25 25 C 1.86303 * 109.43970 * 170.70683 * 23 22 21 26 26 C 1.80385 * 109.65438 * 290.72505 * 23 22 21 27 27 C 1.42774 * 118.23468 * 179.97438 * 19 17 16 28 28 H 1.08994 * 109.47210 * 179.97438 * 1 2 3 29 29 H 1.08999 * 109.47370 * 300.00345 * 1 2 3 30 30 H 1.09004 * 109.47267 * 60.00035 * 1 2 3 31 31 H 1.08001 * 120.00100 * 359.96155 * 4 3 2 32 32 H 1.09001 * 109.47383 * 60.00219 * 6 5 4 33 33 H 0.96705 * 114.00408 * 300.00282 * 7 6 5 34 34 H 1.08001 * 119.92433 * 180.02562 * 12 5 4 35 35 H 1.08006 * 120.00085 * 180.25456 * 13 12 5 36 36 H 1.09006 * 109.47024 * 60.00975 * 16 15 14 37 37 H 1.08998 * 109.47278 * 300.00275 * 16 15 14 38 38 H 1.09001 * 107.74717 * 256.88400 * 20 19 17 39 39 H 1.08998 * 107.75494 * 12.64683 * 20 19 17 40 40 H 1.09008 * 108.52362 * 192.89856 * 21 20 19 41 41 H 1.09000 * 108.41266 * 75.54381 * 21 20 19 42 42 H 1.09002 * 109.72672 * 324.76412 * 22 21 20 43 43 H 1.08998 * 109.72499 * 204.13747 * 22 21 20 44 44 H 1.08996 * 109.47250 * 60.00292 * 24 23 22 45 45 H 1.09005 * 109.46871 * 180.02562 * 24 23 22 46 46 H 1.08999 * 109.47512 * 299.99645 * 24 23 22 47 47 H 1.09003 * 109.46999 * 59.99839 * 25 23 22 48 48 H 1.08997 * 109.47108 * 179.97438 * 25 23 22 49 49 H 1.08996 * 109.47097 * 299.99878 * 25 23 22 50 50 H 1.09001 * 109.04528 * 178.31960 * 26 23 22 51 51 H 1.09000 * 109.04633 * 297.20257 * 26 23 22 52 52 H 1.08997 * 109.90809 * 157.52091 * 27 19 17 53 53 H 1.09004 * 109.97040 * 36.41688 * 27 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2934 2.3744 0.0005 5 6 1.9229 3.6058 0.0011 6 6 1.1021 4.8696 0.0022 7 8 0.2772 4.9030 -1.1641 8 14 2.2370 6.3471 0.0019 9 1 3.0928 6.3137 -1.2112 10 1 1.4282 7.5925 0.0037 11 1 3.0946 6.3127 1.2137 12 6 3.3029 3.6798 0.0016 13 6 4.0605 2.5229 0.0066 14 6 3.4363 1.2863 0.0003 15 8 4.1799 0.1476 0.0000 16 6 5.6007 0.3007 0.0001 17 6 6.2523 -1.0583 0.0003 18 8 5.5674 -2.0592 -0.0001 19 7 7.5961 -1.1613 -0.0001 20 6 8.3890 0.0779 -0.0013 21 6 9.5872 0.1706 0.9670 22 6 9.2987 -0.2943 2.3623 23 14 9.5138 -2.1692 2.4152 24 6 11.1631 -2.6252 1.6788 25 6 9.4418 -2.7519 4.1833 26 6 8.1955 -2.9581 1.4699 27 6 8.1734 -2.4671 0.0006 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3634 0.5139 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 0.2148 2.3193 0.0003 32 1 0.4737 4.8939 0.8925 33 1 0.7706 4.8840 -1.9956 34 1 3.7908 4.6434 0.0024 35 1 5.1388 2.5836 0.0112 36 1 5.9069 0.8500 0.8904 37 1 5.9070 0.8508 -0.8897 38 1 8.7662 0.2301 -1.0127 39 1 7.7151 0.9040 0.2255 40 1 9.9179 1.2084 1.0104 41 1 10.4024 -0.4307 0.5645 42 1 8.2755 -0.0335 2.6328 43 1 9.9942 0.1755 3.0577 44 1 11.9603 -2.1516 2.2517 45 1 11.2875 -3.7077 1.7087 46 1 11.2064 -2.2834 0.6447 47 1 8.4774 -2.4841 4.6151 48 1 9.5654 -3.8344 4.2144 49 1 10.2399 -2.2781 4.7548 50 1 8.3460 -4.0375 1.4820 51 1 7.2372 -2.7286 1.9360 52 1 9.1894 -2.4240 -0.3916 53 1 7.5697 -3.1414 -0.6068 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_60476.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:41:44 Heat of formation + Delta-G solvation = -137.454881 kcal Electronic energy + Delta-G solvation = -32064.920117 eV Core-core repulsion = 27833.658470 eV Total energy + Delta-G solvation = -4231.261647 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.92765 -41.23912 -39.46506 -38.90156 -37.56417 -36.91338 -34.06079 -32.61838 -31.78602 -31.40815 -29.46116 -28.80393 -28.40623 -28.35838 -27.10103 -26.20725 -24.42694 -23.32550 -22.52658 -22.28984 -19.96782 -19.87915 -18.53351 -18.34162 -17.99897 -17.68384 -17.31610 -16.95322 -16.75488 -16.10766 -16.07858 -15.93072 -15.82226 -15.49499 -15.21415 -14.99713 -14.85872 -14.55139 -14.40040 -14.15843 -13.94353 -13.82606 -13.62436 -13.51643 -13.41294 -13.39900 -13.13500 -13.09453 -12.92319 -12.65816 -12.57556 -12.54032 -12.20626 -12.15796 -12.13835 -12.03782 -11.98906 -11.74057 -11.57071 -10.87767 -10.75942 -10.58947 -10.40912 -10.16844 -9.79623 -9.71144 -8.93356 0.15247 0.24856 1.21278 1.39199 1.48454 1.52071 1.56770 1.90330 1.95377 1.96417 2.03745 2.30106 2.42596 2.54334 2.75632 3.27722 3.50339 3.69174 3.75859 3.83160 3.87338 3.97459 4.00267 4.12638 4.13761 4.23065 4.27980 4.32189 4.35574 4.36130 4.43055 4.56549 4.59747 4.65036 4.67172 4.71920 4.75531 4.77199 4.87908 4.90575 4.95237 4.98397 5.02354 5.04537 5.08873 5.33989 5.34356 5.38360 5.51969 5.54360 5.57323 5.65158 5.76425 5.95050 6.20099 6.50527 6.72011 7.04696 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.336 6.336 3 C 0.078 3.922 4 C -0.147 4.147 5 C -0.117 4.117 6 C -0.081 4.081 7 O -0.554 6.554 8 Si 0.988 3.012 9 H -0.245 1.245 10 H -0.280 1.280 11 H -0.251 1.251 12 C -0.122 4.122 13 C -0.161 4.161 14 C 0.083 3.917 15 O -0.315 6.315 16 C 0.033 3.967 17 C 0.503 3.497 18 O -0.569 6.569 19 N -0.588 5.588 20 C 0.085 3.915 21 C -0.120 4.120 22 C -0.402 4.402 23 Si 1.073 2.927 24 C -0.453 4.453 25 C -0.472 4.472 26 C -0.468 4.468 27 C 0.127 3.873 28 H 0.109 0.891 29 H 0.066 0.934 30 H 0.066 0.934 31 H 0.147 0.853 32 H 0.122 0.878 33 H 0.389 0.611 34 H 0.147 0.853 35 H 0.171 0.829 36 H 0.124 0.876 37 H 0.125 0.875 38 H 0.091 0.909 39 H 0.096 0.904 40 H 0.099 0.901 41 H 0.075 0.925 42 H 0.068 0.932 43 H 0.090 0.910 44 H 0.074 0.926 45 H 0.064 0.936 46 H 0.079 0.921 47 H 0.057 0.943 48 H 0.061 0.939 49 H 0.074 0.926 50 H 0.078 0.922 51 H 0.053 0.947 52 H 0.113 0.887 53 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.627 6.807 -0.308 9.505 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.250 6.250 3 C 0.033 3.967 4 C -0.166 4.166 5 C -0.118 4.118 6 C -0.191 4.191 7 O -0.361 6.361 8 Si 0.811 3.189 9 H -0.168 1.168 10 H -0.205 1.205 11 H -0.175 1.175 12 C -0.140 4.140 13 C -0.179 4.179 14 C 0.037 3.963 15 O -0.228 6.228 16 C -0.044 4.044 17 C 0.291 3.709 18 O -0.448 6.448 19 N -0.320 5.320 20 C -0.036 4.036 21 C -0.158 4.158 22 C -0.489 4.489 23 Si 1.263 2.737 24 C -0.561 4.561 25 C -0.577 4.577 26 C -0.551 4.551 27 C 0.004 3.996 28 H 0.128 0.872 29 H 0.084 0.916 30 H 0.084 0.916 31 H 0.165 0.835 32 H 0.140 0.860 33 H 0.238 0.762 34 H 0.165 0.835 35 H 0.189 0.811 36 H 0.141 0.859 37 H 0.143 0.857 38 H 0.109 0.891 39 H 0.114 0.886 40 H 0.117 0.883 41 H 0.093 0.907 42 H 0.087 0.913 43 H 0.108 0.892 44 H 0.093 0.907 45 H 0.083 0.917 46 H 0.098 0.902 47 H 0.076 0.924 48 H 0.080 0.920 49 H 0.093 0.907 50 H 0.097 0.903 51 H 0.072 0.928 52 H 0.131 0.869 53 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 6.357 6.574 0.101 9.146 hybrid contribution -0.577 -1.050 -0.149 1.207 sum 5.781 5.524 -0.048 7.996 Atomic orbital electron populations 1.23299 0.76693 1.05187 1.02283 1.86195 1.23120 1.26614 1.89056 1.18685 0.89781 0.85766 1.02509 1.21029 1.00725 0.90221 1.04613 1.20224 0.94160 0.95299 1.02085 1.25109 1.00657 1.01306 0.92037 1.86480 1.36553 1.96888 1.16210 0.85152 0.76981 0.75057 0.81716 1.16837 1.20532 1.17451 1.21009 0.92884 0.98904 1.01222 1.21317 1.02060 0.89489 1.05061 1.18601 0.88355 0.86416 1.02900 1.86231 1.18151 1.29153 1.89293 1.22898 0.79405 0.95668 1.06436 1.20624 0.83187 0.90717 0.76370 1.90756 1.63765 1.40171 1.50086 1.47159 1.04445 1.08271 1.72171 1.22315 0.95447 0.83902 1.01945 1.21075 0.96784 1.04346 0.93591 1.25610 1.04751 1.19107 0.99408 0.77975 0.64628 0.67033 0.64022 1.26241 1.17063 1.05325 1.07475 1.26405 1.03990 1.05834 1.21474 1.27074 1.14924 1.08646 1.04419 1.20752 0.99726 0.83057 0.96041 0.87236 0.91556 0.91569 0.83496 0.85999 0.76174 0.83528 0.81141 0.85895 0.85719 0.89123 0.88608 0.88262 0.90666 0.91305 0.89171 0.90688 0.91675 0.90206 0.92371 0.91997 0.90719 0.90301 0.92836 0.86929 0.92750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 9.81 113.37 1.11 1.17 16 2 O -0.34 -3.98 10.28 -79.67 -0.82 -4.80 16 3 C 0.08 0.69 6.70 22.57 0.15 0.84 16 4 C -0.15 -0.57 8.60 22.35 0.19 -0.38 16 5 C -0.12 -0.06 5.39 -19.86 -0.11 -0.17 16 6 C -0.08 0.17 2.82 71.23 0.20 0.37 16 7 O -0.55 0.26 12.76 -148.98 -1.90 -1.64 16 8 Si 0.99 -3.62 25.06 68.60 1.72 -1.90 16 9 H -0.25 1.12 7.11 99.48 0.71 1.83 16 10 H -0.28 -0.17 7.11 99.48 0.71 0.54 16 11 H -0.25 0.89 7.11 99.48 0.71 1.59 16 12 C -0.12 0.19 8.66 22.27 0.19 0.38 16 13 C -0.16 0.12 9.04 22.35 0.20 0.32 16 14 C 0.08 0.58 6.70 22.57 0.15 0.73 16 15 O -0.31 -3.36 9.46 -67.08 -0.63 -4.00 16 16 C 0.03 0.02 3.50 71.24 0.25 0.27 16 17 C 0.50 3.41 7.27 87.66 0.64 4.05 16 18 O -0.57 -10.70 15.71 15.99 0.25 -10.45 16 19 N -0.59 0.39 2.45 -822.76 -2.02 -1.63 16 20 C 0.08 -0.79 5.83 86.71 0.51 -0.28 16 21 C -0.12 1.29 5.32 30.04 0.16 1.45 16 22 C -0.40 3.10 4.83 70.98 0.34 3.45 16 23 Si 1.07 -5.86 10.48 68.60 0.72 -5.14 16 24 C -0.45 2.77 8.35 113.37 0.95 3.72 16 25 C -0.47 0.50 8.65 113.37 0.98 1.48 16 26 C -0.47 -0.56 4.47 72.64 0.32 -0.24 16 27 C 0.13 0.10 5.36 87.72 0.47 0.57 16 28 H 0.11 0.04 8.14 -2.39 -0.02 0.02 16 29 H 0.07 0.00 7.66 -2.39 -0.02 -0.01 16 30 H 0.07 0.02 7.66 -2.39 -0.02 0.00 16 31 H 0.15 0.26 6.30 -2.91 -0.02 0.24 16 32 H 0.12 -0.40 7.96 -2.39 -0.02 -0.42 16 33 H 0.39 -2.63 8.70 -74.05 -0.64 -3.28 16 34 H 0.15 -0.90 4.86 -2.91 -0.01 -0.92 16 35 H 0.17 -1.48 6.30 -2.91 -0.02 -1.50 16 36 H 0.12 -0.76 6.95 -2.38 -0.02 -0.78 16 37 H 0.13 -0.83 7.46 -2.39 -0.02 -0.84 16 38 H 0.09 -1.13 8.14 -2.39 -0.02 -1.15 16 39 H 0.10 -1.26 5.49 -2.39 -0.01 -1.27 16 40 H 0.10 -1.35 8.14 -2.38 -0.02 -1.37 16 41 H 0.07 -0.90 5.94 -2.39 -0.01 -0.91 16 42 H 0.07 -0.41 7.90 -2.39 -0.02 -0.42 16 43 H 0.09 -0.82 7.99 -2.39 -0.02 -0.84 16 44 H 0.07 -0.49 7.96 -2.39 -0.02 -0.51 16 45 H 0.06 -0.29 7.96 -2.38 -0.02 -0.31 16 46 H 0.08 -0.64 6.53 -2.39 -0.02 -0.65 16 47 H 0.06 0.05 7.96 -2.39 -0.02 0.03 16 48 H 0.06 0.01 7.96 -2.39 -0.02 -0.01 16 49 H 0.07 -0.17 7.96 -2.39 -0.02 -0.19 16 50 H 0.08 0.12 7.89 -2.39 -0.02 0.10 16 51 H 0.05 0.38 7.28 -2.39 -0.02 0.37 16 52 H 0.11 -0.65 7.14 -2.39 -0.02 -0.67 16 53 H 0.05 0.36 7.46 -2.39 -0.02 0.35 16 Total: 0.00 -27.89 410.57 5.06 -22.82 By element: Atomic # 1 Polarization: -12.03 SS G_CDS: 1.03 Total: -11.00 kcal Atomic # 6 Polarization: 11.01 SS G_CDS: 6.71 Total: 17.72 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -2.02 Total: -1.63 kcal Atomic # 8 Polarization: -17.78 SS G_CDS: -3.10 Total: -20.89 kcal Atomic # 14 Polarization: -9.47 SS G_CDS: 2.44 Total: -7.04 kcal Total: -27.89 5.06 -22.82 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_60476.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.631 kcal (2) G-P(sol) polarization free energy of solvation -27.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.824 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds