Wall clock time and date at job start Thu Mar 4 2021 18:47:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86294 * 1 3 3 C 1.86303 * 109.44015 * 2 1 4 4 C 1.88799 * 109.44147 * 119.92423 * 2 1 3 5 5 C 1.49874 * 108.19207 * 50.78233 * 4 2 1 6 6 C 1.54333 * 114.58760 * 84.45359 * 5 4 2 7 7 N 1.47121 * 117.93537 * 314.26075 * 6 5 4 8 8 C 1.34772 * 118.22834 * 134.72079 * 7 6 5 9 9 O 1.21284 * 119.99979 * 179.97438 * 8 7 6 10 10 C 1.50705 * 120.00258 * 359.97438 * 8 7 6 11 11 O 1.42900 * 109.47097 * 179.97438 * 10 8 7 12 12 C 1.35914 * 116.99915 * 179.97438 * 11 10 8 13 13 C 1.38679 * 120.05700 * 359.71991 * 12 11 10 14 14 C 1.38199 * 119.95083 * 179.72338 * 13 12 11 15 15 C 1.38233 * 120.06939 * 0.53079 * 14 13 12 16 16 C 1.50702 * 119.93923 * 179.74667 * 15 14 13 17 17 O 1.42891 * 109.47416 * 120.02300 * 16 15 14 18 18 Si 1.86302 * 109.47124 * 0.02562 * 16 15 14 19 19 H 1.48498 * 109.46978 * 59.99891 * 18 16 15 20 20 H 1.48502 * 109.47294 * 180.02562 * 18 16 15 21 21 H 1.48497 * 109.47122 * 300.00159 * 18 16 15 22 22 C 1.38290 * 120.12082 * 359.76608 * 15 14 13 23 23 C 1.38187 * 120.04676 * 359.95690 * 22 15 14 24 24 Br 1.89100 * 120.03863 * 179.97438 * 23 22 15 25 25 C 1.42774 * 123.53698 * 314.70878 * 7 6 5 26 26 C 1.54950 * 107.21088 * 96.96223 * 25 7 6 27 27 H 1.08996 * 109.47250 * 300.07869 * 1 2 3 28 28 H 1.09005 * 109.46871 * 60.07779 * 1 2 3 29 29 H 1.08999 * 109.47512 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.46999 * 179.97438 * 3 2 1 31 31 H 1.08997 * 109.47108 * 299.92458 * 3 2 1 32 32 H 1.08996 * 109.47097 * 59.92409 * 3 2 1 33 33 H 1.09002 * 109.72754 * 170.47128 * 4 2 1 34 34 H 1.08998 * 109.72375 * 291.09767 * 4 2 1 35 35 H 1.09008 * 108.45437 * 205.85374 * 5 4 2 36 36 H 1.09000 * 108.45658 * 323.19464 * 5 4 2 37 37 H 1.09001 * 107.76556 * 192.10691 * 6 5 4 38 38 H 1.08998 * 107.69398 * 76.36579 * 6 5 4 39 39 H 1.09006 * 109.46383 * 299.99380 * 10 8 7 40 40 H 1.08998 * 109.47285 * 59.99692 * 10 8 7 41 41 H 1.07992 * 120.02537 * 359.97438 * 13 12 11 42 42 H 1.07994 * 119.96047 * 180.27739 * 14 13 12 43 43 H 1.09004 * 109.46986 * 240.02717 * 16 15 14 44 44 H 0.96704 * 114.00040 * 299.99490 * 17 16 15 45 45 H 1.08000 * 119.97246 * 179.97438 * 22 15 14 46 46 H 1.08997 * 109.90809 * 337.53291 * 25 7 6 47 47 H 1.09004 * 109.97040 * 216.42889 * 25 7 6 48 48 H 1.09001 * 109.04513 * 163.35044 * 26 25 7 49 49 H 1.09000 * 109.04663 * 44.46738 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.4830 1.7568 0.0000 4 6 2.4913 -0.8881 1.5430 5 6 1.7982 -2.2138 1.6348 6 6 2.4535 -3.3398 0.8074 7 7 2.8527 -3.0359 -0.5756 8 6 4.0678 -3.4434 -0.9925 9 8 4.4294 -3.2104 -2.1265 10 6 4.9772 -4.1886 -0.0498 11 8 6.1976 -4.5104 -0.7199 12 6 7.1342 -5.1876 -0.0048 13 6 6.8862 -5.5299 1.3160 14 6 7.8378 -6.2235 2.0394 15 6 9.0407 -6.5667 1.4511 16 6 10.0786 -7.3180 2.2444 17 8 10.3547 -8.5662 1.6060 18 14 9.4388 -7.6295 3.9662 19 1 8.1931 -8.4345 3.8932 20 1 10.4618 -8.3693 4.7481 21 1 9.1518 -6.3324 4.6298 22 6 9.2936 -6.2214 0.1361 23 6 8.3433 -5.5329 -0.5935 24 35 8.6896 -5.0603 -2.3915 25 6 2.0222 -2.3328 -1.4999 26 6 2.4633 -0.8476 -1.4748 27 1 -0.3633 0.5150 0.8892 28 1 -0.3633 0.5127 -0.8907 29 1 -0.3634 -1.0276 0.0005 30 1 3.5730 1.7574 0.0005 31 1 2.1205 2.2700 -0.8906 32 1 2.1183 2.2708 0.8893 33 1 3.5680 -1.0404 1.4671 34 1 2.2655 -0.2929 2.4277 35 1 1.7766 -2.5202 2.6807 36 1 0.7702 -2.0900 1.2943 37 1 1.7571 -4.1777 0.7758 38 1 3.3421 -3.6714 1.3446 39 1 5.1922 -3.5639 0.8173 40 1 4.4889 -5.1070 0.2761 41 1 5.9485 -5.2583 1.7777 42 1 7.6430 -6.4941 3.0666 43 1 10.9930 -6.7271 2.2980 44 1 9.5843 -9.1449 1.5239 45 1 10.2344 -6.4904 -0.3210 46 1 0.9782 -2.4150 -1.1977 47 1 2.1514 -2.7416 -2.5021 48 1 2.0706 -0.3449 -2.3586 49 1 3.5521 -0.7996 -1.4942 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:47:04 Heat of formation + Delta-G solvation = -97.529728 kcal Electronic energy + Delta-G solvation = -29645.650275 eV Core-core repulsion = 25550.521721 eV Total energy + Delta-G solvation = -4095.128554 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 415.077 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.85373 -41.00395 -39.22967 -37.58296 -37.17505 -34.06487 -33.65810 -32.46264 -31.80137 -30.46675 -29.48187 -28.78971 -28.36424 -27.10013 -26.36184 -24.58085 -23.57510 -22.41726 -22.28821 -19.96169 -19.72173 -18.36717 -18.19485 -17.68438 -17.32147 -17.03212 -16.40860 -16.30380 -15.97573 -15.80927 -15.38586 -15.19361 -15.02412 -14.85870 -14.59641 -14.41789 -14.24687 -13.97451 -13.89106 -13.77100 -13.69570 -13.44974 -13.39660 -13.14000 -13.09678 -12.91865 -12.57736 -12.38193 -12.23050 -12.21903 -12.13294 -12.03441 -11.89616 -11.73833 -11.66156 -11.22783 -10.87620 -10.76088 -10.58830 -10.39968 -10.16792 -9.98601 -9.70337 -9.33478 -0.08665 0.10402 0.62485 1.22112 1.38689 1.43568 1.51818 1.55735 1.90828 1.95135 1.97998 2.03294 2.36538 2.37665 2.75611 3.24491 3.49246 3.61519 3.70287 3.75407 3.84626 3.94267 3.98031 4.08010 4.13380 4.25675 4.33307 4.36281 4.43331 4.56820 4.61484 4.64624 4.71962 4.75590 4.76905 4.83280 4.87485 4.90335 4.95275 4.96511 5.02581 5.04620 5.20399 5.34279 5.38946 5.46326 5.51958 5.55204 5.64993 5.76466 6.02510 6.23451 6.73729 7.05212 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.455 4.455 2 Si 1.073 2.927 3 C -0.473 4.473 4 C -0.401 4.401 5 C -0.121 4.121 6 C 0.085 3.915 7 N -0.588 5.588 8 C 0.503 3.497 9 O -0.565 6.565 10 C 0.031 3.969 11 O -0.305 6.305 12 C 0.147 3.853 13 C -0.191 4.191 14 C -0.066 4.066 15 C -0.151 4.151 16 C -0.081 4.081 17 O -0.555 6.555 18 Si 0.985 3.015 19 H -0.242 1.242 20 H -0.280 1.280 21 H -0.247 1.247 22 C -0.030 4.030 23 C -0.144 4.144 24 Br -0.054 7.054 25 C 0.128 3.872 26 C -0.467 4.467 27 H 0.073 0.927 28 H 0.063 0.937 29 H 0.079 0.921 30 H 0.057 0.943 31 H 0.060 0.940 32 H 0.073 0.927 33 H 0.070 0.930 34 H 0.089 0.911 35 H 0.099 0.901 36 H 0.073 0.927 37 H 0.090 0.910 38 H 0.097 0.903 39 H 0.128 0.872 40 H 0.130 0.870 41 H 0.176 0.824 42 H 0.154 0.846 43 H 0.122 0.878 44 H 0.389 0.611 45 H 0.142 0.858 46 H 0.111 0.889 47 H 0.055 0.945 48 H 0.077 0.923 49 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.370 -1.109 10.341 12.196 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.263 2.737 3 C -0.578 4.578 4 C -0.488 4.488 5 C -0.158 4.158 6 C -0.036 4.036 7 N -0.321 5.321 8 C 0.291 3.709 9 O -0.443 6.443 10 C -0.047 4.047 11 O -0.218 6.218 12 C 0.099 3.901 13 C -0.210 4.210 14 C -0.084 4.084 15 C -0.153 4.153 16 C -0.191 4.191 17 O -0.362 6.362 18 Si 0.808 3.192 19 H -0.165 1.165 20 H -0.206 1.206 21 H -0.171 1.171 22 C -0.050 4.050 23 C -0.224 4.224 24 Br 0.031 6.969 25 C 0.005 3.995 26 C -0.550 4.550 27 H 0.092 0.908 28 H 0.082 0.918 29 H 0.098 0.902 30 H 0.077 0.923 31 H 0.079 0.921 32 H 0.092 0.908 33 H 0.089 0.911 34 H 0.108 0.892 35 H 0.117 0.883 36 H 0.092 0.908 37 H 0.108 0.892 38 H 0.116 0.884 39 H 0.146 0.854 40 H 0.147 0.853 41 H 0.193 0.807 42 H 0.171 0.829 43 H 0.140 0.860 44 H 0.239 0.761 45 H 0.160 0.840 46 H 0.129 0.871 47 H 0.073 0.927 48 H 0.096 0.904 49 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -5.792 -0.644 9.616 11.244 hybrid contribution -0.078 0.188 -0.887 0.910 sum -5.870 -0.455 8.728 10.529 Atomic orbital electron populations 1.26259 1.20479 1.04955 1.04518 0.77979 0.66409 0.64233 0.65065 1.26419 1.05773 1.21335 1.04253 1.25592 1.04734 1.03498 1.14933 1.21076 1.00175 0.93491 1.01107 1.22309 1.02988 0.99110 0.79165 1.47155 1.15030 1.56167 1.13744 1.20571 0.82795 0.79681 0.87887 1.90775 1.74274 1.57219 1.22063 1.22996 0.83699 1.02662 0.95317 1.86257 1.25458 1.70133 1.39937 1.18819 0.87980 0.92095 0.91217 1.21508 1.03344 1.04289 0.91822 1.21261 0.91835 0.94880 1.00421 1.20404 0.97049 1.03088 0.94722 1.25119 1.01686 0.86349 1.05908 1.86502 1.39708 1.27713 1.82280 0.85199 0.79421 0.80999 0.73592 1.16489 1.20597 1.17098 1.20903 0.97655 0.92966 0.93485 1.21314 0.97082 1.10641 0.93347 1.96762 1.95406 1.92387 1.12323 1.20741 0.95293 0.90278 0.93198 1.27059 1.05852 1.03169 1.18915 0.90753 0.91761 0.90212 0.92326 0.92082 0.90780 0.91149 0.89240 0.88255 0.90794 0.89163 0.88438 0.85426 0.85276 0.80682 0.82856 0.85997 0.76134 0.83980 0.87076 0.92691 0.90409 0.92679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 2.99 8.35 113.37 0.95 3.94 16 2 Si 1.07 -6.72 10.48 68.60 0.72 -6.00 16 3 C -0.47 0.76 8.65 113.37 0.98 1.74 16 4 C -0.40 3.55 4.83 70.98 0.34 3.89 16 5 C -0.12 1.44 5.32 30.04 0.16 1.60 16 6 C 0.09 -0.94 5.83 86.71 0.51 -0.43 16 7 N -0.59 1.48 2.45 -822.72 -2.01 -0.53 16 8 C 0.50 2.10 7.27 87.66 0.64 2.73 16 9 O -0.57 -9.06 15.71 15.99 0.25 -8.81 16 10 C 0.03 -0.08 3.50 71.24 0.25 0.17 16 11 O -0.31 -1.92 9.01 -73.54 -0.66 -2.58 16 12 C 0.15 0.49 6.68 22.52 0.15 0.64 16 13 C -0.19 0.79 9.04 22.37 0.20 0.99 16 14 C -0.07 0.30 8.66 22.26 0.19 0.49 16 15 C -0.15 0.23 5.39 -19.85 -0.11 0.12 16 16 C -0.08 0.28 2.82 71.24 0.20 0.48 16 17 O -0.55 0.63 12.77 -148.98 -1.90 -1.27 16 18 Si 0.99 -5.22 25.07 68.60 1.72 -3.50 16 19 H -0.24 1.60 7.11 99.48 0.71 2.31 16 20 H -0.28 0.11 7.11 99.48 0.71 0.82 16 21 H -0.25 1.39 7.11 99.48 0.71 2.09 16 22 C -0.03 -0.08 9.35 22.27 0.21 0.12 16 23 C -0.14 -0.90 6.24 22.40 0.14 -0.76 16 24 Br -0.05 -0.55 33.16 -20.37 -0.68 -1.23 16 25 C 0.13 -0.07 5.36 87.73 0.47 0.40 16 26 C -0.47 -0.05 4.47 72.65 0.32 0.28 16 27 H 0.07 -0.51 7.96 -2.39 -0.02 -0.53 16 28 H 0.06 -0.31 7.96 -2.38 -0.02 -0.33 16 29 H 0.08 -0.68 6.53 -2.39 -0.02 -0.69 16 30 H 0.06 0.01 7.96 -2.39 -0.02 -0.01 16 31 H 0.06 -0.02 7.96 -2.39 -0.02 -0.04 16 32 H 0.07 -0.20 7.96 -2.39 -0.02 -0.22 16 33 H 0.07 -0.52 7.90 -2.39 -0.02 -0.54 16 34 H 0.09 -0.89 7.99 -2.39 -0.02 -0.91 16 35 H 0.10 -1.47 8.14 -2.38 -0.02 -1.49 16 36 H 0.07 -0.95 5.94 -2.39 -0.01 -0.96 16 37 H 0.09 -1.26 8.14 -2.39 -0.02 -1.28 16 38 H 0.10 -1.50 5.49 -2.39 -0.01 -1.51 16 39 H 0.13 -1.22 6.95 -2.38 -0.02 -1.23 16 40 H 0.13 -1.28 7.47 -2.39 -0.02 -1.30 16 41 H 0.18 -2.15 6.30 -2.91 -0.02 -2.17 16 42 H 0.15 -1.45 4.87 -2.91 -0.01 -1.46 16 43 H 0.12 -0.52 7.96 -2.38 -0.02 -0.54 16 44 H 0.39 -3.01 8.70 -74.05 -0.64 -3.65 16 45 H 0.14 0.36 8.06 -2.91 -0.02 0.34 16 46 H 0.11 -0.75 7.14 -2.39 -0.02 -0.77 16 47 H 0.05 0.30 7.46 -2.39 -0.02 0.28 16 48 H 0.08 0.06 7.89 -2.39 -0.02 0.04 16 49 H 0.05 0.32 7.28 -2.39 -0.02 0.30 16 Total: 0.00 -25.09 401.75 4.12 -20.97 By element: Atomic # 1 Polarization: -14.53 SS G_CDS: 1.08 Total: -13.45 kcal Atomic # 6 Polarization: 10.81 SS G_CDS: 5.60 Total: 16.41 kcal Atomic # 7 Polarization: 1.48 SS G_CDS: -2.01 Total: -0.53 kcal Atomic # 8 Polarization: -10.35 SS G_CDS: -2.31 Total: -12.66 kcal Atomic # 14 Polarization: -11.94 SS G_CDS: 2.44 Total: -9.51 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.23 kcal Total: -25.09 4.12 -20.97 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.565 kcal (2) G-P(sol) polarization free energy of solvation -25.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.965 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds