Wall clock time and date at job start Thu Mar 4 2021 18:47:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35967 * 117.00321 * 2 1 4 4 C 1.39444 * 120.11895 * 180.02562 * 3 2 1 5 5 O 1.34769 * 133.24495 * 359.70617 * 4 3 2 6 6 C 1.34929 * 110.84752 * 179.88288 * 5 4 3 7 7 C 1.46988 * 125.14363 * 180.13823 * 6 5 4 8 8 O 1.21656 * 120.00206 * 180.31639 * 7 6 5 9 9 N 1.34777 * 120.00076 * 0.31902 * 7 6 5 10 10 C 1.46269 * 122.81969 * 357.48355 * 9 7 6 11 11 C 1.45975 * 114.58027 * 79.19132 * 10 9 7 12 12 C 1.55344 * 108.92204 * 60.36000 * 11 10 9 13 13 Si 1.84156 * 109.12342 * 290.55246 * 12 11 10 14 14 C 1.86300 * 108.84536 * 207.39247 * 13 12 11 15 15 C 1.86304 * 108.84575 * 325.85750 * 13 12 11 16 16 C 1.88546 * 112.66151 * 86.57003 * 13 12 11 17 17 C 1.44477 * 122.82135 * 177.19279 * 9 7 6 18 18 C 1.35812 * 109.71364 * 0.41677 * 6 5 4 19 19 C 1.40617 * 119.13489 * 180.02562 * 4 3 2 20 20 C 1.39774 * 120.12034 * 0.02562 * 19 4 3 21 21 C 1.50697 * 120.09625 * 179.97438 * 20 19 4 22 22 O 1.42899 * 109.47176 * 75.02045 * 21 20 19 23 23 Si 1.86306 * 109.47051 * 195.02101 * 21 20 19 24 24 H 1.48499 * 109.46945 * 59.99832 * 23 21 20 25 25 H 1.48498 * 109.46761 * 179.97438 * 23 21 20 26 26 H 1.48497 * 109.47155 * 299.99940 * 23 21 20 27 27 C 1.36639 * 119.80907 * 359.97438 * 20 19 4 28 28 C 1.38255 * 120.11836 * 0.02562 * 3 2 1 29 29 H 1.09003 * 109.47137 * 59.99630 * 1 2 3 30 30 H 1.08996 * 109.47136 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47181 * 300.00247 * 1 2 3 32 32 H 1.09000 * 108.46074 * 200.51603 * 10 9 7 33 33 H 1.09003 * 108.46348 * 318.03781 * 10 9 7 34 34 H 1.09005 * 109.56191 * 180.18685 * 11 10 9 35 35 H 1.08999 * 109.56361 * 300.41489 * 11 10 9 36 36 H 1.09002 * 109.53061 * 50.44210 * 12 11 10 37 37 H 1.08990 * 109.52984 * 170.59179 * 12 11 10 38 38 H 1.09003 * 109.47007 * 60.00254 * 14 13 12 39 39 H 1.09001 * 109.47112 * 180.02562 * 14 13 12 40 40 H 1.08998 * 109.47203 * 299.99997 * 14 13 12 41 41 H 1.09006 * 109.46747 * 36.68248 * 15 13 12 42 42 H 1.08996 * 109.47089 * 156.67964 * 15 13 12 43 43 H 1.08997 * 109.47172 * 276.68493 * 15 13 12 44 44 H 1.09005 * 110.07800 * 80.92696 * 16 13 12 45 45 H 1.08994 * 110.08212 * 202.41746 * 16 13 12 46 46 H 1.09003 * 109.89791 * 50.59302 * 17 9 7 47 47 H 1.08997 * 109.89615 * 171.70911 * 17 9 7 48 48 H 1.08001 * 126.95336 * 179.73874 * 18 6 5 49 49 H 1.09001 * 109.46858 * 315.02378 * 21 20 19 50 50 H 0.96702 * 113.99791 * 60.00066 * 22 21 20 51 51 H 1.07997 * 119.74569 * 179.97438 * 27 20 19 52 52 H 1.08002 * 119.66700 * 359.97438 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2872 -0.0005 5 8 4.4140 0.3572 0.0039 6 6 5.6317 0.9383 -0.0017 7 6 6.9130 0.2180 -0.0019 8 8 7.9596 0.8383 -0.0014 9 7 6.9285 -1.1297 -0.0028 10 6 5.7096 -1.9365 0.0505 11 6 5.0094 -2.0636 -1.2240 12 6 5.9551 -2.7420 -2.2529 13 14 7.3170 -1.5781 -2.6795 14 6 7.9230 -1.9649 -4.3981 15 6 6.6515 0.1619 -2.6544 16 6 8.7692 -1.6891 -1.4822 17 6 8.1501 -1.8988 -0.0625 18 6 5.4945 2.2895 -0.0008 19 6 4.0556 2.5509 0.0000 20 6 3.2768 3.7116 0.0016 21 6 3.9384 5.0655 0.0028 22 8 4.4598 5.3420 -1.2986 23 14 2.6870 6.3678 0.4601 24 1 2.1452 6.0804 1.8125 25 1 3.3392 7.7019 0.4618 26 1 1.5795 6.3590 -0.5291 27 6 1.9138 3.6150 0.0022 28 6 1.2958 2.3725 0.0005 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 5.9715 -2.9346 0.4016 33 1 5.0285 -1.4857 0.7724 34 1 4.1167 -2.6748 -1.0906 35 1 4.7245 -1.0751 -1.5842 36 1 6.3743 -3.6499 -1.8191 37 1 5.3941 -2.9935 -3.1529 38 1 7.1032 -1.8492 -5.1071 39 1 8.7304 -1.2815 -4.6611 40 1 8.2903 -2.9906 -4.4316 41 1 5.9231 0.2607 -1.8495 42 1 7.4708 0.8619 -2.4909 43 1 6.1712 0.3810 -3.6080 44 1 9.4048 -2.5357 -1.7423 45 1 9.3475 -0.7656 -1.5086 46 1 8.8484 -1.5455 0.6963 47 1 7.9317 -2.9548 0.0960 48 1 6.2876 3.0226 -0.0004 49 1 4.7514 5.0719 0.7288 50 1 3.7905 5.3521 -1.9965 51 1 1.3131 4.5125 0.0038 52 1 0.2175 2.3120 0.0005 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_6672420.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:47:44 Heat of formation + Delta-G solvation = -75.174790 kcal Electronic energy + Delta-G solvation = -35242.015463 eV Core-core repulsion = 30912.539822 eV Total energy + Delta-G solvation = -4329.475641 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 377.166 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.90632 -41.51993 -40.50242 -39.09257 -38.19003 -37.01157 -34.20979 -33.66110 -32.18278 -31.60054 -30.60967 -29.39908 -28.56086 -28.30601 -27.10949 -26.32792 -25.58789 -24.01305 -23.43939 -22.58510 -21.84860 -20.85075 -19.30120 -18.98399 -18.49818 -17.95723 -17.79806 -17.43949 -17.02157 -16.72559 -16.27398 -16.21885 -15.92366 -15.81198 -15.42068 -15.09385 -14.96089 -14.68836 -14.66489 -14.53099 -14.21577 -13.94011 -13.90691 -13.82163 -13.52808 -13.49869 -13.41857 -13.35851 -13.24982 -13.05420 -12.68134 -12.47294 -12.35314 -12.32687 -12.24837 -12.10144 -12.08246 -11.67188 -11.62838 -11.43543 -11.04753 -10.75020 -10.49669 -10.46683 -10.43156 -9.96731 -9.73787 -8.99306 -0.66485 0.08147 0.60797 1.11866 1.17743 1.43979 1.54538 1.70721 1.80883 1.83823 1.92259 1.96907 1.99113 2.12852 2.38323 2.68828 3.03053 3.39245 3.59856 3.65905 3.75740 3.85520 3.86734 3.92644 4.12841 4.13988 4.22313 4.31604 4.36269 4.41105 4.43591 4.49350 4.54401 4.56192 4.62209 4.64779 4.74578 4.75705 4.76668 4.77985 4.83529 4.84370 4.93383 4.93631 5.02833 5.07690 5.19647 5.26089 5.30108 5.31299 5.40199 5.43934 5.52587 5.56199 5.66072 6.12909 6.24809 6.68659 6.75865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.327 6.327 3 C 0.141 3.859 4 C 0.017 3.983 5 O -0.164 6.164 6 C -0.022 4.022 7 C 0.612 3.388 8 O -0.538 6.538 9 N -0.598 5.598 10 C 0.092 3.908 11 C -0.130 4.130 12 C -0.405 4.405 13 Si 1.039 2.961 14 C -0.457 4.457 15 C -0.487 4.487 16 C -0.430 4.430 17 C 0.113 3.887 18 C -0.127 4.127 19 C -0.092 4.092 20 C -0.107 4.107 21 C -0.088 4.088 22 O -0.552 6.552 23 Si 0.991 3.009 24 H -0.252 1.252 25 H -0.276 1.276 26 H -0.232 1.232 27 C -0.098 4.098 28 C -0.171 4.171 29 H 0.072 0.928 30 H 0.118 0.882 31 H 0.073 0.927 32 H 0.120 0.880 33 H 0.072 0.928 34 H 0.096 0.904 35 H 0.056 0.944 36 H 0.101 0.899 37 H 0.084 0.916 38 H 0.066 0.934 39 H 0.059 0.941 40 H 0.079 0.921 41 H 0.069 0.931 42 H 0.049 0.951 43 H 0.061 0.939 44 H 0.102 0.898 45 H 0.060 0.940 46 H 0.065 0.935 47 H 0.131 0.869 48 H 0.167 0.833 49 H 0.111 0.889 50 H 0.388 0.612 51 H 0.158 0.842 52 H 0.178 0.822 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.942 -4.112 0.315 8.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.241 6.241 3 C 0.095 3.905 4 C -0.031 4.031 5 O -0.066 6.066 6 C -0.072 4.072 7 C 0.401 3.599 8 O -0.417 6.417 9 N -0.330 5.330 10 C -0.029 4.029 11 C -0.168 4.168 12 C -0.493 4.493 13 Si 1.231 2.769 14 C -0.564 4.564 15 C -0.589 4.589 16 C -0.516 4.516 17 C -0.009 4.009 18 C -0.147 4.147 19 C -0.093 4.093 20 C -0.108 4.108 21 C -0.197 4.197 22 O -0.360 6.360 23 Si 0.813 3.187 24 H -0.176 1.176 25 H -0.202 1.202 26 H -0.155 1.155 27 C -0.116 4.116 28 C -0.189 4.189 29 H 0.091 0.909 30 H 0.136 0.864 31 H 0.091 0.909 32 H 0.138 0.862 33 H 0.090 0.910 34 H 0.114 0.886 35 H 0.074 0.926 36 H 0.119 0.881 37 H 0.103 0.897 38 H 0.085 0.915 39 H 0.078 0.922 40 H 0.098 0.902 41 H 0.088 0.912 42 H 0.068 0.932 43 H 0.080 0.920 44 H 0.121 0.879 45 H 0.079 0.921 46 H 0.084 0.916 47 H 0.149 0.851 48 H 0.184 0.816 49 H 0.129 0.871 50 H 0.237 0.763 51 H 0.176 0.824 52 H 0.195 0.805 Dipole moment (debyes) X Y Z Total from point charges -7.401 -3.616 0.912 8.287 hybrid contribution 0.054 0.343 -0.557 0.657 sum -7.347 -3.273 0.355 8.051 Atomic orbital electron populations 1.23475 0.75491 1.06058 1.02956 1.86143 1.24090 1.25519 1.88379 1.17896 0.86105 0.86760 0.99716 1.19246 0.88438 0.87386 1.08032 1.84304 1.12271 1.33815 1.76173 1.21857 0.84492 0.92638 1.08254 1.16431 0.85172 0.82177 0.76103 1.90884 1.31406 1.67669 1.51691 1.47560 1.10321 1.04086 1.71015 1.20631 0.85824 0.97217 0.99240 1.20787 0.99407 1.01542 0.95015 1.26261 1.10118 1.09695 1.03214 0.78737 0.66975 0.65069 0.66161 1.26254 1.05920 1.05431 1.18814 1.27332 1.05762 1.21931 1.03911 1.27506 1.13416 1.04971 1.05684 1.21821 0.84694 0.97026 0.97316 1.22769 0.95410 0.94445 1.02105 1.19533 0.92221 0.92881 1.04698 1.19634 0.93414 0.94382 1.03391 1.25221 1.07351 0.97965 0.89188 1.86523 1.39260 1.93353 1.16820 0.85129 0.76559 0.75885 0.81138 1.17566 1.20157 1.15532 1.20845 0.93061 0.98862 0.98844 1.21334 1.01741 0.89752 1.06117 0.90894 0.86399 0.90887 0.86195 0.91009 0.88586 0.92568 0.88056 0.89711 0.91495 0.92203 0.90196 0.91232 0.93201 0.91957 0.87921 0.92094 0.91605 0.85142 0.81576 0.87070 0.76265 0.82440 0.80518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.55 10.50 -93.18 -0.98 -1.53 16 3 C 0.14 0.46 6.70 22.56 0.15 0.61 16 4 C 0.02 0.13 7.35 23.14 0.17 0.30 16 5 O -0.16 -1.27 5.63 -13.34 -0.08 -1.35 16 6 C -0.02 -0.21 4.42 24.00 0.11 -0.11 16 7 C 0.61 5.99 4.24 86.54 0.37 6.36 16 8 O -0.54 -8.50 15.83 -4.21 -0.07 -8.57 16 9 N -0.60 -1.76 1.62 -837.73 -1.36 -3.12 16 10 C 0.09 -0.14 4.42 84.27 0.37 0.23 16 11 C -0.13 0.16 5.06 29.24 0.15 0.31 16 12 C -0.41 1.46 4.72 72.79 0.34 1.80 16 13 Si 1.04 -0.05 9.98 68.60 0.68 0.63 16 14 C -0.46 -0.41 8.65 113.37 0.98 0.57 16 15 C -0.49 -3.67 6.84 113.37 0.78 -2.89 16 16 C -0.43 -0.40 5.08 73.13 0.37 -0.03 16 17 C 0.11 -0.04 5.70 87.90 0.50 0.46 16 18 C -0.13 -1.28 10.68 23.79 0.25 -1.02 16 19 C -0.09 -0.70 6.16 -20.24 -0.12 -0.83 16 20 C -0.11 -0.32 5.26 -19.87 -0.10 -0.43 16 21 C -0.09 -0.11 2.70 71.24 0.19 0.08 16 22 O -0.55 -1.73 12.88 -148.98 -1.92 -3.65 16 23 Si 0.99 -2.15 25.50 68.60 1.75 -0.41 16 24 H -0.25 0.37 7.11 99.48 0.71 1.08 16 25 H -0.28 -0.56 7.11 99.48 0.71 0.15 16 26 H -0.23 1.20 6.74 99.48 0.67 1.87 16 27 C -0.10 0.13 8.62 22.02 0.19 0.32 16 28 C -0.17 0.31 9.03 22.40 0.20 0.52 16 29 H 0.07 -0.71 7.66 -2.39 -0.02 -0.73 16 30 H 0.12 -1.17 8.14 -2.39 -0.02 -1.19 16 31 H 0.07 -0.71 7.66 -2.39 -0.02 -0.73 16 32 H 0.12 -0.94 7.17 -2.39 -0.02 -0.96 16 33 H 0.07 0.05 6.30 -2.39 -0.02 0.04 16 34 H 0.10 -0.32 8.14 -2.38 -0.02 -0.34 16 35 H 0.06 0.19 4.27 -2.39 -0.01 0.18 16 36 H 0.10 -0.78 7.90 -2.39 -0.02 -0.80 16 37 H 0.08 -0.33 7.95 -2.39 -0.02 -0.35 16 38 H 0.07 0.07 7.96 -2.39 -0.02 0.05 16 39 H 0.06 0.16 7.96 -2.39 -0.02 0.14 16 40 H 0.08 -0.11 7.96 -2.39 -0.02 -0.13 16 41 H 0.07 0.58 1.83 -2.38 0.00 0.58 16 42 H 0.05 0.59 7.35 -2.39 -0.02 0.57 16 43 H 0.06 0.45 7.96 -2.39 -0.02 0.43 16 44 H 0.10 -0.32 8.00 -2.38 -0.02 -0.34 16 45 H 0.06 0.41 7.64 -2.39 -0.02 0.39 16 46 H 0.07 0.15 8.12 -2.39 -0.02 0.13 16 47 H 0.13 -1.05 7.17 -2.39 -0.02 -1.06 16 48 H 0.17 1.69 8.06 -2.91 -0.02 1.66 16 49 H 0.11 0.19 7.96 -2.39 -0.02 0.17 16 50 H 0.39 -1.60 8.70 -74.06 -0.64 -2.24 16 51 H 0.16 -1.01 4.84 -2.91 -0.01 -1.02 16 52 H 0.18 -1.55 6.26 -2.91 -0.02 -1.57 16 Total: 0.00 -19.83 391.32 5.09 -14.74 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: 1.04 Total: -4.02 kcal Atomic # 6 Polarization: 1.26 SS G_CDS: 6.01 Total: 7.27 kcal Atomic # 7 Polarization: -1.76 SS G_CDS: -1.36 Total: -3.12 kcal Atomic # 8 Polarization: -12.06 SS G_CDS: -3.04 Total: -15.10 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: 2.43 Total: 0.23 kcal Total: -19.83 5.09 -14.74 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_6672420.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.434 kcal (2) G-P(sol) polarization free energy of solvation -19.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.741 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds