Wall clock time and date at job start Thu Mar 4 2021 18:48:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.33818 * 122.44972 * 2 1 4 4 C 1.50703 * 124.51997 * 359.97438 * 3 2 1 5 5 O 1.42894 * 109.47366 * 29.99533 * 4 3 2 6 6 Si 1.86294 * 109.47006 * 149.99946 * 4 3 2 7 7 H 1.48506 * 109.47280 * 59.99787 * 6 4 3 8 8 H 1.48493 * 109.47359 * 179.97438 * 6 4 3 9 9 H 1.48500 * 109.47305 * 299.99958 * 6 4 3 10 10 S 1.70616 * 110.95248 * 179.73957 * 3 2 1 11 11 C 1.75829 * 91.56569 * 0.30785 * 10 3 2 12 12 C 1.46585 * 125.45846 * 179.97438 * 11 10 3 13 13 O 1.21705 * 119.99772 * 185.50475 * 12 11 10 14 14 N 1.34768 * 119.99681 * 5.50471 * 12 11 10 15 15 C 1.45043 * 120.98938 * 355.51851 * 14 12 11 16 16 C 1.52527 * 107.75561 * 285.04515 * 15 14 12 17 17 C 1.46935 * 114.66054 * 268.14242 * 16 15 14 18 18 Si 1.88881 * 108.02531 * 62.65951 * 17 16 15 19 19 C 1.86292 * 109.60595 * 55.38126 * 18 17 16 20 20 C 1.86299 * 109.60604 * 175.71632 * 18 17 16 21 21 C 1.85390 * 108.65203 * 295.62850 * 18 17 16 22 22 C 1.47155 * 120.84974 * 175.54244 * 14 12 11 23 23 C 1.36654 * 109.08074 * 359.69546 * 11 10 3 24 24 H 1.09002 * 109.46975 * 269.99618 * 1 2 3 25 25 H 1.08997 * 109.47122 * 30.00227 * 1 2 3 26 26 H 1.09002 * 109.47165 * 149.99815 * 1 2 3 27 27 H 1.09003 * 109.46563 * 269.99897 * 4 3 2 28 28 H 0.96706 * 113.99737 * 59.99875 * 5 4 3 29 29 H 1.09004 * 109.94384 * 165.42388 * 15 14 12 30 30 H 1.09001 * 109.72748 * 44.53964 * 15 14 12 31 31 H 1.08998 * 108.41659 * 146.84909 * 16 15 14 32 32 H 1.08995 * 108.41542 * 29.43093 * 16 15 14 33 33 H 1.09003 * 109.74934 * 182.28705 * 17 16 15 34 34 H 1.08994 * 109.75570 * 302.97420 * 17 16 15 35 35 H 1.08997 * 109.47303 * 60.00131 * 19 18 17 36 36 H 1.09003 * 109.46939 * 180.02562 * 19 18 17 37 37 H 1.09000 * 109.47659 * 299.99882 * 19 18 17 38 38 H 1.08998 * 109.47626 * 59.99492 * 20 18 17 39 39 H 1.09004 * 109.47190 * 180.02562 * 20 18 17 40 40 H 1.09004 * 109.47161 * 299.99454 * 20 18 17 41 41 H 1.08997 * 108.89052 * 200.88561 * 21 18 17 42 42 H 1.09000 * 108.89192 * 319.36618 * 21 18 17 43 43 H 1.09005 * 108.59040 * 18.88916 * 22 14 12 44 44 H 1.08990 * 108.48227 * 261.09988 * 22 14 12 45 45 H 1.07998 * 123.34884 * 180.24396 * 23 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2251 1.1292 0.0000 4 6 1.6355 2.5162 -0.0006 5 8 0.3751 2.4983 0.6725 6 14 2.7921 3.6829 0.8778 7 1 4.1020 3.7015 0.1783 8 1 2.2115 5.0496 0.8768 9 1 2.9852 3.2277 2.2781 10 16 3.8970 0.7892 0.0072 11 6 3.5938 -0.9428 0.0009 12 6 4.6232 -1.9863 0.0024 13 8 4.3041 -3.1560 -0.1035 14 7 5.9229 -1.6504 0.1212 15 6 6.3352 -0.2601 0.1518 16 6 6.2371 0.2856 -1.2691 17 6 7.4735 0.1744 -2.0552 18 14 7.8825 -1.6598 -2.2449 19 6 6.4284 -2.5502 -2.9954 20 6 9.3726 -1.8575 -3.3455 21 6 8.2448 -2.3630 -0.5682 22 6 6.9637 -2.6858 0.2228 23 6 2.2446 -1.1601 0.0005 24 1 -0.3633 -0.0001 1.0277 25 1 -0.3633 0.8899 -0.5139 26 1 -0.3633 -0.8900 -0.5139 27 1 1.4938 2.8502 -1.0284 28 1 0.4255 2.2100 1.5942 29 1 7.3634 -0.1849 0.5058 30 1 5.6754 0.3049 0.8103 31 1 5.9564 1.3374 -1.2154 32 1 5.4472 -0.2540 -1.7914 33 1 7.3267 0.6225 -3.0380 34 1 8.2867 0.6821 -1.5367 35 1 6.2081 -2.1252 -3.9746 36 1 6.6666 -3.6084 -3.1034 37 1 5.5595 -2.4382 -2.3469 38 1 10.2234 -1.3407 -2.9015 39 1 9.6064 -2.9166 -3.4538 40 1 9.1595 -1.4308 -4.3257 41 1 8.8260 -3.2774 -0.6871 42 1 8.8360 -1.6422 -0.0034 43 1 6.5551 -3.6266 -0.1462 44 1 7.2259 -2.8101 1.2734 45 1 1.8019 -2.1452 0.0008 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:48:00 Heat of formation + Delta-G solvation = -69.182704 kcal Electronic energy + Delta-G solvation = -25154.088725 eV Core-core repulsion = 21807.841831 eV Total energy + Delta-G solvation = -3346.246893 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 327.124 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.27595 -39.93143 -37.93541 -37.22179 -34.44043 -32.60261 -31.24504 -30.17068 -29.19857 -28.47015 -27.49386 -26.56307 -24.64802 -23.17459 -22.71897 -20.58097 -20.01617 -19.03654 -18.00852 -17.30124 -17.09792 -16.79835 -16.38166 -15.99537 -15.58791 -15.49226 -15.15562 -15.00699 -14.50098 -14.37768 -14.30427 -13.99494 -13.94343 -13.85441 -13.62604 -13.38539 -13.27715 -13.20724 -13.12977 -13.09071 -12.89732 -12.59377 -12.45106 -12.30972 -12.20737 -12.14268 -11.89829 -11.44513 -11.01923 -10.88055 -10.72449 -10.67712 -10.40983 -9.81251 -9.49145 -9.23643 -0.53622 0.38093 0.83366 0.99034 1.26401 1.35892 1.40235 1.61115 1.70361 1.79391 1.83033 1.89338 2.22359 2.54006 3.27684 3.42972 3.59058 3.68433 3.84858 4.04713 4.14663 4.21845 4.25028 4.35940 4.43386 4.52175 4.62912 4.65744 4.66425 4.67450 4.71422 4.78297 4.81846 4.83012 4.86539 4.91249 4.93025 5.05527 5.12500 5.14535 5.29745 5.41690 5.46994 5.49986 5.54436 5.63277 6.28530 6.38452 7.09416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.094 4.094 3 C -0.269 4.269 4 C -0.038 4.038 5 O -0.530 6.530 6 Si 0.902 3.098 7 H -0.232 1.232 8 H -0.231 1.231 9 H -0.240 1.240 10 S 0.218 5.782 11 C -0.268 4.268 12 C 0.596 3.404 13 O -0.522 6.522 14 N -0.608 5.608 15 C 0.087 3.913 16 C -0.142 4.142 17 C -0.393 4.393 18 Si 0.993 3.007 19 C -0.446 4.446 20 C -0.447 4.447 21 C -0.426 4.426 22 C 0.125 3.875 23 C -0.044 4.044 24 H 0.069 0.931 25 H 0.085 0.915 26 H 0.060 0.940 27 H 0.125 0.875 28 H 0.377 0.623 29 H 0.107 0.893 30 H 0.082 0.918 31 H 0.077 0.923 32 H 0.072 0.928 33 H 0.083 0.917 34 H 0.078 0.922 35 H 0.066 0.934 36 H 0.068 0.932 37 H 0.069 0.931 38 H 0.069 0.931 39 H 0.069 0.931 40 H 0.070 0.930 41 H 0.093 0.907 42 H 0.079 0.921 43 H 0.090 0.910 44 H 0.064 0.936 45 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.012 3.816 0.599 4.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.106 4.106 3 C -0.387 4.387 4 C -0.151 4.151 5 O -0.335 6.335 6 Si 0.722 3.278 7 H -0.155 1.155 8 H -0.153 1.153 9 H -0.163 1.163 10 S 0.489 5.511 11 C -0.387 4.387 12 C 0.385 3.615 13 O -0.400 6.400 14 N -0.342 5.342 15 C -0.038 4.038 16 C -0.181 4.181 17 C -0.479 4.479 18 Si 1.188 2.812 19 C -0.554 4.554 20 C -0.554 4.554 21 C -0.511 4.511 22 C 0.003 3.997 23 C -0.078 4.078 24 H 0.087 0.913 25 H 0.104 0.896 26 H 0.079 0.921 27 H 0.143 0.857 28 H 0.225 0.775 29 H 0.125 0.875 30 H 0.099 0.901 31 H 0.095 0.905 32 H 0.091 0.909 33 H 0.101 0.899 34 H 0.097 0.903 35 H 0.085 0.915 36 H 0.087 0.913 37 H 0.088 0.912 38 H 0.088 0.912 39 H 0.088 0.912 40 H 0.089 0.911 41 H 0.111 0.889 42 H 0.098 0.902 43 H 0.108 0.892 44 H 0.083 0.917 45 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 4.471 4.875 0.443 6.630 hybrid contribution -1.341 -1.368 0.310 1.940 sum 3.131 3.507 0.754 4.761 Atomic orbital electron populations 1.20639 0.88952 1.03282 1.02595 1.18643 0.98227 0.90511 1.03238 1.25227 1.02195 1.00682 1.10641 1.24372 0.92140 0.95342 1.03219 1.86530 1.27935 1.90062 1.29015 0.86266 0.78919 0.81140 0.81511 1.15525 1.15303 1.16281 1.83839 0.99768 0.98702 1.68828 1.24513 0.97888 0.96726 1.19613 1.16872 0.81075 0.87363 0.76206 1.90854 1.81045 1.18478 1.49635 1.47713 1.05985 1.07285 1.73211 1.21732 1.02702 0.81731 0.97641 1.20710 0.99610 1.02601 0.95142 1.25081 1.00551 1.19227 1.03042 0.79591 0.67326 0.67715 0.66538 1.26173 1.14293 1.08019 1.06869 1.26075 1.14555 1.04702 1.10109 1.26551 0.99892 1.08077 1.16615 1.21184 0.86926 0.91359 1.00200 1.20701 0.90944 1.00069 0.96053 0.91280 0.89641 0.92119 0.85722 0.77490 0.87481 0.90062 0.90473 0.90941 0.89860 0.90285 0.91514 0.91274 0.91171 0.91179 0.91199 0.91089 0.88873 0.90205 0.89172 0.91731 0.82942 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.01 8.67 36.01 0.31 0.32 16 2 C -0.09 -0.09 5.75 -106.45 -0.61 -0.71 16 3 C -0.27 -0.04 5.54 -35.86 -0.20 -0.24 16 4 C -0.04 0.05 2.76 36.01 0.10 0.14 16 5 O -0.53 0.50 9.85 -35.23 -0.35 0.15 16 6 Si 0.90 -1.28 26.59 -169.99 -4.52 -5.80 16 7 H -0.23 0.40 7.10 56.52 0.40 0.80 16 8 H -0.23 0.08 7.11 56.52 0.40 0.48 16 9 H -0.24 0.20 7.11 56.52 0.40 0.60 16 10 S 0.22 -0.05 12.93 -107.50 -1.39 -1.44 16 11 C -0.27 -0.58 5.88 -36.79 -0.22 -0.80 16 12 C 0.60 2.00 5.80 -12.90 -0.07 1.93 16 13 O -0.52 -3.50 16.27 5.18 0.08 -3.41 16 14 N -0.61 -0.38 1.85 -175.57 -0.32 -0.70 16 15 C 0.09 -0.14 4.91 -5.07 -0.02 -0.17 16 16 C -0.14 0.24 3.22 -29.88 -0.10 0.15 16 17 C -0.39 1.02 4.77 34.25 0.16 1.18 16 18 Si 0.99 -2.32 10.48 -169.99 -1.78 -4.11 16 19 C -0.45 -0.23 8.41 101.05 0.85 0.62 16 20 C -0.45 0.74 8.65 101.05 0.87 1.62 16 21 C -0.43 0.97 4.36 37.67 0.16 1.13 16 22 C 0.12 -0.01 5.75 -3.17 -0.02 -0.03 16 23 C -0.04 -0.10 9.80 -40.43 -0.40 -0.49 16 24 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 25 H 0.08 0.03 6.41 -51.93 -0.33 -0.30 16 26 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 27 H 0.13 -0.24 7.96 -51.93 -0.41 -0.66 16 28 H 0.38 -1.35 8.66 45.56 0.39 -0.96 16 29 H 0.11 -0.38 6.71 -51.93 -0.35 -0.73 16 30 H 0.08 -0.16 4.90 -25.05 -0.12 -0.28 16 31 H 0.08 -0.19 7.04 -51.93 -0.37 -0.56 16 32 H 0.07 -0.03 5.52 -51.93 -0.29 -0.32 16 33 H 0.08 -0.22 8.00 -51.93 -0.42 -0.64 16 34 H 0.08 -0.28 8.00 -51.93 -0.42 -0.70 16 35 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 36 H 0.07 0.06 7.96 -51.93 -0.41 -0.36 16 37 H 0.07 0.17 5.76 -51.93 -0.30 -0.13 16 38 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 39 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 40 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 41 H 0.09 -0.25 7.93 -51.93 -0.41 -0.67 16 42 H 0.08 -0.27 7.30 -51.93 -0.38 -0.65 16 43 H 0.09 0.14 7.11 -51.93 -0.37 -0.23 16 44 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 45 H 0.15 0.33 8.06 -52.49 -0.42 -0.09 16 LS Contribution 347.13 15.07 5.23 5.23 Total: 0.00 -5.61 347.13 -8.54 -14.15 By element: Atomic # 1 Polarization: -2.42 SS G_CDS: -6.32 Total: -8.73 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: 0.83 Total: 4.67 kcal Atomic # 7 Polarization: -0.38 SS G_CDS: -0.32 Total: -0.70 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.26 Total: -3.26 kcal Atomic # 14 Polarization: -3.61 SS G_CDS: -6.30 Total: -9.91 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -1.39 Total: -1.44 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -5.61 -8.54 -14.15 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.034 kcal (2) G-P(sol) polarization free energy of solvation -5.609 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.148 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.183 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds