Wall clock time and date at job start Thu Mar 4 2021 18:51:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86294 * 109.00854 * 2 1 4 4 C 1.86974 * 109.02205 * 241.16627 * 2 1 3 5 5 C 1.54212 * 109.29036 * 199.06616 * 4 2 1 6 6 C 1.52377 * 108.06666 * 321.63857 * 5 4 2 7 7 N 1.45480 * 105.90290 * 102.24047 * 6 5 4 8 8 C 1.34773 * 116.96793 * 80.90818 * 7 6 5 9 9 O 1.21636 * 119.99991 * 355.51754 * 8 7 6 10 10 C 1.47187 * 120.00195 * 175.50856 * 8 7 6 11 11 C 1.36012 * 123.46284 * 228.70508 * 10 8 7 12 12 S 1.70443 * 110.81648 * 179.89176 * 11 10 8 13 13 C 1.75509 * 92.44675 * 0.31731 * 12 11 10 14 14 C 1.50701 * 124.71298 * 179.85693 * 13 12 11 15 15 O 1.42904 * 109.46972 * 119.95723 * 14 13 12 16 16 Si 1.86297 * 109.47184 * 359.95650 * 14 13 12 17 17 H 1.48501 * 109.47239 * 60.00062 * 16 14 13 18 18 H 1.48499 * 109.47463 * 179.97438 * 16 14 13 19 19 H 1.48498 * 109.47328 * 300.00232 * 16 14 13 20 20 C 1.32769 * 110.57624 * 359.81688 * 13 12 11 21 21 C 1.42432 * 126.06600 * 260.89437 * 7 6 5 22 22 C 1.55255 * 107.47815 * 64.25447 * 21 7 6 23 23 H 1.09007 * 109.47087 * 301.09363 * 1 2 3 24 24 H 1.08999 * 109.46876 * 61.09676 * 1 2 3 25 25 H 1.09004 * 109.47264 * 181.09841 * 1 2 3 26 26 H 1.09002 * 109.47475 * 159.78042 * 3 2 1 27 27 H 1.08994 * 109.47036 * 279.77908 * 3 2 1 28 28 H 1.09000 * 109.47075 * 39.78169 * 3 2 1 29 29 H 1.09005 * 109.51849 * 319.10155 * 4 2 1 30 30 H 1.08993 * 109.51943 * 79.21072 * 4 2 1 31 31 H 1.08997 * 109.96404 * 201.87777 * 5 4 2 32 32 H 1.09004 * 109.55410 * 81.15897 * 5 4 2 33 33 H 1.09007 * 110.17986 * 343.11070 * 6 5 4 34 34 H 1.09000 * 110.18068 * 221.37495 * 6 5 4 35 35 H 1.08000 * 124.58962 * 0.02562 * 11 10 8 36 36 H 1.08997 * 109.47193 * 239.95774 * 14 13 12 37 37 H 0.96696 * 113.99742 * 299.99529 * 15 14 13 38 38 H 1.07994 * 123.46131 * 180.02562 * 20 13 12 39 39 H 1.09001 * 109.85876 * 183.74991 * 21 7 6 40 40 H 1.09001 * 109.85557 * 304.69502 * 21 7 6 41 41 H 1.09000 * 109.51129 * 57.37412 * 22 21 7 42 42 H 1.08999 * 109.50856 * 177.52161 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4698 1.7614 0.0000 4 6 2.4724 -0.8525 -1.5485 5 6 3.9390 -1.2850 -1.3483 6 6 4.6520 -0.1898 -0.5646 7 7 4.7483 -0.6765 0.8030 8 6 5.7454 -1.5414 1.0751 9 8 6.4633 -1.9434 0.1792 10 6 5.9660 -1.9993 2.4564 11 6 7.1843 -1.9992 3.0611 12 16 7.0693 -2.5907 4.6555 13 6 5.3405 -2.8571 4.5120 14 6 4.4641 -3.4125 5.6050 15 8 3.4528 -2.4584 5.9356 16 14 5.5004 -3.7666 7.1122 17 1 6.1390 -2.5102 7.5801 18 1 4.6368 -4.3132 8.1895 19 1 6.5513 -4.7579 6.7686 20 6 4.9118 -2.5006 3.3071 21 6 3.8869 -0.3239 1.8811 22 6 2.4670 -0.8470 1.5339 23 1 -0.3633 0.5308 0.8801 24 1 -0.3633 0.4967 -0.8997 25 1 -0.3634 -1.0275 0.0197 26 1 3.4999 1.7909 0.3552 27 1 2.4231 2.1617 -1.0127 28 1 1.8414 2.3621 0.6576 29 1 1.8569 -1.7299 -1.7474 30 1 2.4093 -0.1647 -2.3917 31 1 4.4227 -1.4196 -2.3158 32 1 3.9706 -2.2191 -0.7873 33 1 4.0722 0.7328 -0.5954 34 1 5.6477 -0.0214 -0.9748 35 1 8.1001 -1.6672 2.5948 36 1 3.9954 -4.3346 5.2616 37 1 3.7985 -1.6117 6.2497 38 1 3.8808 -2.5773 2.9951 39 1 4.2377 -0.7887 2.8025 40 1 3.8650 0.7596 1.9983 41 1 2.5069 -1.9229 1.3641 42 1 1.7882 -0.6328 2.3594 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915400_6894386.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:51:13 Heat of formation + Delta-G solvation = -47.387166 kcal Electronic energy + Delta-G solvation = -22983.343453 eV Core-core repulsion = 19793.579304 eV Total energy + Delta-G solvation = -3189.764149 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 313.108 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.73613 -39.02959 -37.68600 -37.19589 -34.34350 -31.81103 -31.09778 -29.39525 -28.88804 -27.56424 -26.94675 -25.11750 -23.70939 -22.40374 -21.48606 -19.88388 -18.93380 -18.16201 -17.66052 -17.31911 -16.43803 -16.15865 -15.94857 -15.59808 -15.22699 -15.04142 -14.76201 -14.61810 -14.43050 -14.21766 -13.91439 -13.76118 -13.70039 -13.61844 -13.47377 -13.32955 -12.95194 -12.71893 -12.66192 -12.56534 -12.37499 -12.25894 -11.92340 -11.79120 -11.72474 -10.91716 -10.85478 -10.68073 -10.60519 -10.53604 -9.98931 -9.61014 -9.38235 -0.24410 0.32035 0.62550 0.95994 1.03188 1.30859 1.42459 1.71773 1.74292 1.76250 1.80602 1.96981 2.21427 2.53683 3.24960 3.47804 3.68961 3.92490 4.01356 4.06660 4.12676 4.28654 4.33099 4.43366 4.45629 4.49857 4.50126 4.59629 4.69563 4.69711 4.73480 4.75688 4.80266 4.86422 4.92491 5.13150 5.17735 5.23269 5.31866 5.37575 5.44516 5.47561 5.73618 6.35026 6.36116 7.20660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.450 4.450 2 Si 1.007 2.993 3 C -0.462 4.462 4 C -0.414 4.414 5 C -0.118 4.118 6 C 0.079 3.921 7 N -0.595 5.595 8 C 0.568 3.432 9 O -0.527 6.527 10 C -0.159 4.159 11 C -0.181 4.181 12 S 0.173 5.827 13 C -0.240 4.240 14 C -0.037 4.037 15 O -0.532 6.532 16 Si 0.891 3.109 17 H -0.233 1.233 18 H -0.226 1.226 19 H -0.232 1.232 20 C -0.079 4.079 21 C 0.098 3.902 22 C -0.433 4.433 23 H 0.069 0.931 24 H 0.068 0.932 25 H 0.068 0.932 26 H 0.076 0.924 27 H 0.072 0.928 28 H 0.072 0.928 29 H 0.073 0.927 30 H 0.075 0.925 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.111 0.889 34 H 0.088 0.912 35 H 0.174 0.826 36 H 0.127 0.873 37 H 0.378 0.622 38 H 0.160 0.840 39 H 0.107 0.893 40 H 0.074 0.926 41 H 0.081 0.919 42 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.994 2.216 3.237 4.400 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.201 2.799 3 C -0.568 4.568 4 C -0.500 4.500 5 C -0.156 4.156 6 C -0.042 4.042 7 N -0.327 5.327 8 C 0.354 3.646 9 O -0.403 6.403 10 C -0.176 4.176 11 C -0.319 4.319 12 S 0.439 5.561 13 C -0.356 4.356 14 C -0.151 4.151 15 O -0.337 6.337 16 Si 0.710 3.290 17 H -0.156 1.156 18 H -0.148 1.148 19 H -0.155 1.155 20 C -0.109 4.109 21 C -0.025 4.025 22 C -0.520 4.520 23 H 0.088 0.912 24 H 0.088 0.912 25 H 0.087 0.913 26 H 0.094 0.906 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.092 0.908 30 H 0.094 0.906 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.128 0.872 34 H 0.106 0.894 35 H 0.191 0.809 36 H 0.145 0.855 37 H 0.225 0.775 38 H 0.177 0.823 39 H 0.125 0.875 40 H 0.092 0.908 41 H 0.100 0.900 42 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -0.457 1.138 4.462 4.628 hybrid contribution -0.911 0.776 -1.600 1.998 sum -1.368 1.915 2.862 3.705 Atomic orbital electron populations 1.26137 1.20665 1.04449 1.04461 0.79248 0.66780 0.66885 0.66947 1.26662 1.05933 1.19340 1.04896 1.26638 1.00449 1.07654 1.15230 1.21754 0.94511 0.98520 1.00851 1.22096 1.03349 0.98663 0.80080 1.46882 1.30202 1.45116 1.10511 1.17975 0.80359 0.79013 0.87210 1.90828 1.46951 1.55758 1.46811 1.20212 0.93137 1.08211 0.96060 1.25511 1.01587 1.04687 1.00124 1.83269 1.03563 1.59820 1.09424 1.24785 0.97908 1.11704 1.01251 1.24344 0.94385 0.95214 1.01111 1.86546 1.32584 1.27238 1.87326 0.86301 0.80091 0.83654 0.78911 1.15567 1.14809 1.15484 1.21214 0.99839 0.98337 0.91472 1.21486 0.89320 1.00994 0.90745 1.26959 1.00780 1.08041 1.16211 0.91204 0.91242 0.91266 0.90566 0.90891 0.90895 0.90772 0.90575 0.91218 0.91124 0.87173 0.89382 0.80877 0.85504 0.77476 0.82291 0.87505 0.90833 0.90047 0.89127 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.74 8.65 101.05 0.87 1.61 16 2 Si 1.01 -2.78 10.05 -169.99 -1.71 -4.48 16 3 C -0.46 1.10 7.38 101.05 0.75 1.85 16 4 C -0.41 0.43 5.08 37.79 0.19 0.62 16 5 C -0.12 -0.09 5.59 -26.42 -0.15 -0.24 16 6 C 0.08 0.02 5.25 -4.91 -0.03 0.00 16 7 N -0.60 -0.31 2.19 -177.89 -0.39 -0.70 16 8 C 0.57 1.78 6.73 -12.63 -0.09 1.70 16 9 O -0.53 -3.56 16.26 5.25 0.09 -3.47 16 10 C -0.16 -0.25 4.97 -104.63 -0.52 -0.77 16 11 C -0.18 -0.15 10.79 29.93 0.32 0.17 16 12 S 0.17 -0.09 20.18 -107.50 -2.17 -2.25 16 13 C -0.24 0.18 5.68 -36.18 -0.21 -0.03 16 14 C -0.04 0.07 2.95 36.01 0.11 0.17 16 15 O -0.53 0.89 12.85 -35.23 -0.45 0.44 16 16 Si 0.89 -1.41 26.19 -169.99 -4.45 -5.86 16 17 H -0.23 0.36 7.11 56.52 0.40 0.76 16 18 H -0.23 0.12 7.11 56.52 0.40 0.52 16 19 H -0.23 0.19 7.11 56.52 0.40 0.59 16 20 C -0.08 0.01 7.60 -39.02 -0.30 -0.29 16 21 C 0.10 -0.15 5.21 -4.98 -0.03 -0.18 16 22 C -0.43 1.03 4.46 38.35 0.17 1.20 16 23 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 24 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 25 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 26 H 0.08 -0.18 4.91 -51.93 -0.26 -0.43 16 27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 28 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 29 H 0.07 -0.06 7.97 -51.93 -0.41 -0.47 16 30 H 0.08 -0.11 7.97 -51.93 -0.41 -0.52 16 31 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 32 H 0.07 0.16 7.36 -51.93 -0.38 -0.23 16 33 H 0.11 -0.19 2.84 -51.92 -0.15 -0.34 16 34 H 0.09 0.13 7.57 -51.93 -0.39 -0.26 16 35 H 0.17 0.03 8.06 -52.49 -0.42 -0.39 16 36 H 0.13 -0.32 7.96 -51.93 -0.41 -0.74 16 37 H 0.38 -1.83 8.70 45.56 0.40 -1.43 16 38 H 0.16 -0.15 6.35 -52.49 -0.33 -0.48 16 39 H 0.11 -0.18 3.62 -51.93 -0.19 -0.36 16 40 H 0.07 -0.19 6.56 -51.93 -0.34 -0.53 16 41 H 0.08 -0.14 7.54 -51.93 -0.39 -0.53 16 42 H 0.09 -0.30 7.96 -51.93 -0.41 -0.71 16 LS Contribution 332.73 15.07 5.01 5.01 Total: 0.00 -5.76 332.73 -8.37 -14.13 By element: Atomic # 1 Polarization: -3.22 SS G_CDS: -5.40 Total: -8.62 kcal Atomic # 6 Polarization: 4.71 SS G_CDS: 1.11 Total: 5.81 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: -0.39 Total: -0.70 kcal Atomic # 8 Polarization: -2.67 SS G_CDS: -0.37 Total: -3.03 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: -6.16 Total: -10.35 kcal Atomic # 16 Polarization: -0.09 SS G_CDS: -2.17 Total: -2.25 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -5.76 -8.37 -14.13 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_6894386.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.262 kcal (2) G-P(sol) polarization free energy of solvation -5.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.020 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.367 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.125 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds