Wall clock time and date at job start Thu Mar 4 2021 18:52:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36768 * 125.79945 * 2 1 4 4 C 1.47261 * 126.94184 * 359.97438 * 3 2 1 5 5 O 1.21630 * 120.00472 * 352.13832 * 4 3 2 6 6 N 1.34785 * 119.99898 * 172.13777 * 4 3 2 7 7 C 1.46269 * 122.81971 * 4.17611 * 6 4 3 8 8 C 1.45984 * 114.57795 * 79.19355 * 7 6 4 9 9 C 1.55339 * 108.92228 * 60.35653 * 8 7 6 10 10 Si 1.84160 * 109.12459 * 290.55164 * 9 8 7 11 11 C 1.86299 * 108.84301 * 207.39617 * 10 9 8 12 12 C 1.86295 * 108.84545 * 325.86070 * 10 9 8 13 13 C 1.88547 * 112.65849 * 86.57545 * 10 9 8 14 14 C 1.44482 * 122.81922 * 183.88164 * 6 4 3 15 15 C 1.46683 * 106.11684 * 180.02562 * 3 2 1 16 16 C 1.34492 * 106.33314 * 359.97438 * 15 3 2 17 17 C 1.50695 * 125.57463 * 180.02562 * 16 15 3 18 18 O 1.42890 * 109.47449 * 64.99810 * 17 16 15 19 19 Si 1.86304 * 109.47051 * 185.00292 * 17 16 15 20 20 H 1.48501 * 109.46871 * 299.99692 * 19 17 16 21 21 H 1.48503 * 109.47241 * 59.99758 * 19 17 16 22 22 H 1.48497 * 109.46981 * 179.97438 * 19 17 16 23 23 N 1.34655 * 125.80084 * 180.32923 * 2 1 3 24 24 H 1.09005 * 109.46920 * 90.00432 * 1 2 3 25 25 H 1.08996 * 109.46897 * 209.99941 * 1 2 3 26 26 H 1.08995 * 109.47478 * 330.00479 * 1 2 3 27 27 H 1.08998 * 108.46245 * 200.51258 * 7 6 4 28 28 H 1.08996 * 108.46179 * 318.03977 * 7 6 4 29 29 H 1.08995 * 109.56038 * 180.19079 * 8 7 6 30 30 H 1.08998 * 109.55940 * 300.41140 * 8 7 6 31 31 H 1.08997 * 109.52737 * 50.44799 * 9 8 7 32 32 H 1.09006 * 109.52524 * 170.58785 * 9 8 7 33 33 H 1.08994 * 109.47420 * 59.99957 * 11 10 9 34 34 H 1.09002 * 109.46653 * 180.02562 * 11 10 9 35 35 H 1.09005 * 109.47176 * 299.99741 * 11 10 9 36 36 H 1.09006 * 109.47276 * 36.14648 * 12 10 9 37 37 H 1.08998 * 109.47518 * 156.15118 * 12 10 9 38 38 H 1.09003 * 109.47163 * 276.15404 * 12 10 9 39 39 H 1.08997 * 110.07500 * 80.92555 * 13 10 9 40 40 H 1.08993 * 110.07698 * 202.41307 * 13 10 9 41 41 H 1.09004 * 109.89449 * 50.59660 * 14 6 4 42 42 H 1.09004 * 109.89243 * 171.70836 * 14 6 4 43 43 H 1.08001 * 126.83672 * 180.02562 * 15 3 2 44 44 H 1.09000 * 109.47039 * 304.99674 * 17 16 15 45 45 H 0.96701 * 114.00045 * 60.00556 * 18 17 16 46 46 H 0.96996 * 124.85326 * 359.97438 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6933 2.7868 -0.1451 6 7 2.7744 3.5023 0.1592 7 6 4.2128 3.2525 0.2489 8 6 4.8701 3.0215 -1.0340 9 6 4.6851 4.2782 -1.9282 10 14 2.9163 4.4111 -2.4235 11 6 2.8136 5.3084 -4.0530 12 6 2.2207 2.6961 -2.6371 13 6 1.8736 5.3346 -1.1528 14 6 2.4048 4.8960 0.2501 15 6 3.6882 0.6152 -0.0006 16 6 3.6096 -0.7274 -0.0004 17 6 4.7820 -1.6742 -0.0003 18 8 5.5104 -1.5303 1.2206 19 14 4.1657 -3.4257 -0.1531 20 1 3.2762 -3.7392 0.9939 21 1 3.4087 -3.5752 -1.4219 22 1 5.3210 -4.3586 -0.1536 23 7 2.2947 -1.0921 -0.0063 24 1 -0.3633 -0.0001 -1.0277 25 1 -0.3633 -0.8900 0.5138 26 1 -0.3634 0.8900 0.5137 27 1 4.6831 4.1111 0.7281 28 1 4.3725 2.3771 0.8784 29 1 5.9330 2.8419 -0.8723 30 1 4.4237 2.1552 -1.5221 31 1 4.9751 5.1684 -1.3701 32 1 5.3080 4.1870 -2.8181 33 1 3.3678 4.7528 -4.8093 34 1 1.7699 5.3932 -4.3558 35 1 3.2428 6.3047 -3.9468 36 1 2.6576 2.0314 -1.8917 37 1 1.1387 2.7243 -2.5091 38 1 2.4591 2.3290 -3.6353 39 1 1.9950 6.4103 -1.2798 40 1 0.8239 5.0616 -1.2606 41 1 1.6188 5.0236 0.9944 42 1 3.2749 5.4935 0.5221 43 1 4.5890 1.2110 -0.0004 44 1 5.4349 -1.4441 -0.8422 45 1 4.9905 -1.7200 2.0135 46 1 1.9734 -2.0073 -0.0112 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915400_9865296.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:52:11 Heat of formation + Delta-G solvation = -26.053573 kcal Electronic energy + Delta-G solvation = -26103.369816 eV Core-core repulsion = 22732.641126 eV Total energy + Delta-G solvation = -3370.728691 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.163 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.73092 -40.82330 -37.95831 -37.60474 -34.27711 -32.80975 -32.46683 -30.61040 -29.32683 -28.79557 -28.34366 -27.15742 -25.50481 -24.56581 -22.53529 -22.31675 -21.40523 -19.26999 -18.60213 -17.82625 -17.15197 -17.10900 -16.41569 -16.24349 -15.91823 -15.53020 -15.31345 -14.93154 -14.72618 -14.50397 -14.41242 -13.97552 -13.95510 -13.80683 -13.71815 -13.44950 -13.35109 -13.24313 -13.10815 -12.88431 -12.61915 -12.55490 -12.52942 -12.27829 -12.16571 -12.03965 -11.95004 -11.54359 -10.85081 -10.68113 -10.44084 -10.38426 -10.33333 -9.77469 -9.57694 -9.08451 0.71969 1.05155 1.25574 1.33325 1.42677 1.80253 1.86128 2.00405 2.02682 2.09481 2.32436 2.53748 2.82362 3.47572 3.70419 3.81279 3.92912 4.01974 4.20833 4.27435 4.37715 4.48072 4.49909 4.62243 4.65076 4.68659 4.71898 4.74763 4.77086 4.78165 4.81496 4.89560 4.92715 4.94439 5.05212 5.06188 5.15276 5.25926 5.36848 5.41645 5.51528 5.54579 5.66905 5.72747 5.80392 5.91506 6.38997 6.61045 6.68471 7.36876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.106 3.894 3 C -0.252 4.252 4 C 0.603 3.397 5 O -0.576 6.576 6 N -0.607 5.607 7 C 0.078 3.922 8 C -0.145 4.145 9 C -0.401 4.401 10 Si 1.043 2.957 11 C -0.464 4.464 12 C -0.479 4.479 13 C -0.433 4.433 14 C 0.119 3.881 15 C -0.153 4.153 16 C -0.029 4.029 17 C -0.042 4.042 18 O -0.543 6.543 19 Si 0.956 3.044 20 H -0.248 1.248 21 H -0.257 1.257 22 H -0.258 1.258 23 N -0.545 5.545 24 H 0.078 0.922 25 H 0.087 0.913 26 H 0.081 0.919 27 H 0.104 0.896 28 H 0.091 0.909 29 H 0.105 0.895 30 H 0.073 0.927 31 H 0.093 0.907 32 H 0.085 0.915 33 H 0.067 0.933 34 H 0.054 0.946 35 H 0.074 0.926 36 H 0.088 0.912 37 H 0.044 0.956 38 H 0.055 0.945 39 H 0.087 0.913 40 H 0.055 0.945 41 H 0.051 0.949 42 H 0.118 0.882 43 H 0.185 0.815 44 H 0.141 0.859 45 H 0.389 0.611 46 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.912 -2.314 1.401 5.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.013 4.013 3 C -0.262 4.262 4 C 0.396 3.604 5 O -0.457 6.457 6 N -0.340 5.340 7 C -0.044 4.044 8 C -0.183 4.183 9 C -0.490 4.490 10 Si 1.234 2.766 11 C -0.570 4.570 12 C -0.583 4.583 13 C -0.518 4.518 14 C -0.004 4.004 15 C -0.176 4.176 16 C -0.137 4.137 17 C -0.154 4.154 18 O -0.349 6.349 19 Si 0.779 3.221 20 H -0.171 1.171 21 H -0.181 1.181 22 H -0.182 1.182 23 N -0.144 5.144 24 H 0.096 0.904 25 H 0.105 0.895 26 H 0.099 0.901 27 H 0.122 0.878 28 H 0.109 0.891 29 H 0.123 0.877 30 H 0.091 0.909 31 H 0.111 0.889 32 H 0.103 0.897 33 H 0.086 0.914 34 H 0.074 0.926 35 H 0.093 0.907 36 H 0.106 0.894 37 H 0.063 0.937 38 H 0.074 0.926 39 H 0.106 0.894 40 H 0.074 0.926 41 H 0.070 0.930 42 H 0.136 0.864 43 H 0.202 0.798 44 H 0.158 0.842 45 H 0.238 0.762 46 H 0.259 0.741 Dipole moment (debyes) X Y Z Total from point charges 4.442 -3.037 0.892 5.454 hybrid contribution -1.116 -0.114 0.069 1.124 sum 3.326 -3.151 0.961 4.681 Atomic orbital electron populations 1.20551 0.86649 1.04320 1.03669 1.20465 0.94079 0.85828 1.00962 1.20171 0.94316 0.91639 1.20068 1.17203 0.84359 0.84565 0.74233 1.90733 1.18499 1.84535 1.51921 1.47353 1.07582 1.06633 1.72398 1.20874 0.79098 1.05257 0.99129 1.21073 1.02621 0.98613 0.95970 1.26178 1.17337 1.00975 1.04486 0.78648 0.67705 0.65078 0.65137 1.26359 1.03610 1.08812 1.18199 1.27175 1.05839 1.21000 1.04305 1.27589 1.08308 1.08143 1.07808 1.21568 1.01410 0.80776 0.96619 1.22937 0.96297 0.92989 1.05418 1.20970 0.84444 0.96185 1.12104 1.24408 0.93073 1.06187 0.91687 1.86532 1.40180 1.92735 1.15446 0.85582 0.80337 0.75174 0.81007 1.17137 1.18096 1.18210 1.41762 1.05742 1.08522 1.58418 0.90351 0.89451 0.90068 0.87779 0.89122 0.87673 0.90893 0.88870 0.89665 0.91403 0.92642 0.90720 0.89354 0.93706 0.92603 0.89416 0.92642 0.93026 0.86375 0.79781 0.84185 0.76194 0.74076 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.24 9.81 71.24 0.70 0.46 16 2 C 0.11 0.38 7.17 41.78 0.30 0.68 16 3 C -0.25 -1.30 4.49 -19.04 -0.09 -1.38 16 4 C 0.60 4.89 4.15 86.61 0.36 5.25 16 5 O -0.58 -8.50 13.19 -4.13 -0.05 -8.55 16 6 N -0.61 -1.32 1.62 -837.39 -1.36 -2.67 16 7 C 0.08 -0.32 4.42 84.27 0.37 0.05 16 8 C -0.15 0.73 4.21 29.24 0.12 0.86 16 9 C -0.40 1.80 4.72 72.79 0.34 2.14 16 10 Si 1.04 0.33 9.98 68.60 0.68 1.01 16 11 C -0.46 -0.95 8.65 113.37 0.98 0.03 16 12 C -0.48 -3.08 6.85 113.37 0.78 -2.31 16 13 C -0.43 -1.36 5.01 73.12 0.37 -1.00 16 14 C 0.12 0.16 5.73 87.90 0.50 0.67 16 15 C -0.15 -0.04 7.35 23.62 0.17 0.13 16 16 C -0.03 0.05 6.09 40.98 0.25 0.30 16 17 C -0.04 0.22 2.98 71.23 0.21 0.43 16 18 O -0.54 2.30 12.88 -148.98 -1.92 0.38 16 19 Si 0.96 -5.08 26.24 68.60 1.80 -3.28 16 20 H -0.25 1.41 7.11 99.48 0.71 2.12 16 21 H -0.26 0.92 7.11 99.48 0.71 1.63 16 22 H -0.26 0.44 7.11 99.48 0.71 1.15 16 23 N -0.54 0.66 5.41 -171.07 -0.93 -0.27 16 24 H 0.08 0.22 8.14 -2.38 -0.02 0.20 16 25 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 26 H 0.08 0.57 6.66 -2.39 -0.02 0.55 16 27 H 0.10 -0.88 7.17 -2.39 -0.02 -0.90 16 28 H 0.09 -0.40 5.04 -2.39 -0.01 -0.41 16 29 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 30 H 0.07 -0.18 4.05 -2.39 -0.01 -0.19 16 31 H 0.09 -0.67 7.90 -2.39 -0.02 -0.69 16 32 H 0.08 -0.43 7.95 -2.38 -0.02 -0.45 16 33 H 0.07 0.11 7.96 -2.39 -0.02 0.09 16 34 H 0.05 0.23 7.96 -2.39 -0.02 0.21 16 35 H 0.07 0.02 7.96 -2.38 -0.02 0.00 16 36 H 0.09 0.51 2.12 -2.38 -0.01 0.51 16 37 H 0.04 0.53 7.00 -2.39 -0.02 0.52 16 38 H 0.05 0.33 7.96 -2.39 -0.02 0.31 16 39 H 0.09 0.01 8.00 -2.39 -0.02 -0.01 16 40 H 0.05 0.52 7.47 -2.39 -0.02 0.51 16 41 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 42 H 0.12 -0.65 7.17 -2.39 -0.02 -0.67 16 43 H 0.19 -0.65 3.68 -2.91 -0.01 -0.66 16 44 H 0.14 -1.05 7.96 -2.39 -0.02 -1.07 16 45 H 0.39 -3.81 8.70 -74.06 -0.64 -4.45 16 46 H 0.42 -2.35 6.72 -92.71 -0.62 -2.97 16 Total: 0.00 -16.82 334.29 4.11 -12.71 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: 0.50 Total: -5.65 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: 5.38 Total: 6.32 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -2.28 Total: -2.94 kcal Atomic # 8 Polarization: -6.19 SS G_CDS: -1.97 Total: -8.17 kcal Atomic # 14 Polarization: -4.76 SS G_CDS: 2.48 Total: -2.27 kcal Total: -16.82 4.11 -12.71 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915400_9865296.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.346 kcal (2) G-P(sol) polarization free energy of solvation -16.816 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.161 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.708 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.054 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds