Wall clock time and date at job start Thu Mar 4 2021 12:30:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86298 * 109.46967 * 2 1 4 4 C 1.86298 * 109.46947 * 239.99972 * 2 1 3 5 5 C 1.86797 * 109.46842 * 119.99992 * 2 1 3 6 6 C 1.38500 * 120.38277 * 270.31898 * 5 2 1 7 7 C 1.39293 * 118.36291 * 180.24200 * 6 5 2 8 8 N 1.39878 * 120.49394 * 179.73785 * 7 6 5 9 9 C 1.34776 * 119.99824 * 327.13956 * 8 7 6 10 10 O 1.21599 * 119.99842 * 354.72729 * 9 8 7 11 11 C 1.47550 * 119.99829 * 174.72617 * 9 8 7 12 12 C 1.36511 * 120.01046 * 180.02562 * 11 9 8 13 13 N 1.35947 * 120.50652 * 179.97438 * 12 11 9 14 14 C 1.36994 * 132.41911 * 180.02562 * 13 12 11 15 15 C 1.50701 * 126.42330 * 0.04549 * 14 13 12 16 16 O 1.42909 * 109.47266 * 329.70785 * 15 14 13 17 17 Si 1.86298 * 109.47143 * 209.70771 * 15 14 13 18 18 H 1.48506 * 109.46991 * 59.99887 * 17 15 14 19 19 H 1.48496 * 109.47109 * 299.99984 * 17 15 14 20 20 H 1.48507 * 109.47425 * 179.97438 * 17 15 14 21 21 C 1.34998 * 107.14748 * 179.77957 * 14 13 12 22 22 N 1.33578 * 108.65537 * 0.22842 * 21 14 13 23 23 C 1.32416 * 109.22656 * 0.02562 * 22 21 14 24 24 C 1.41251 * 132.12051 * 180.02562 * 23 22 21 25 25 Br 1.89097 * 120.25231 * 359.96870 * 24 23 22 26 26 C 1.35703 * 119.49135 * 179.33991 * 24 23 22 27 27 C 1.38872 * 119.01978 * 359.46439 * 7 6 5 28 28 N 1.31822 * 120.65806 * 0.25276 * 27 7 6 29 29 C 1.31862 * 121.79850 * 0.02562 * 28 27 7 30 30 H 1.09001 * 109.47136 * 300.00270 * 1 2 3 31 31 H 1.08996 * 109.47153 * 59.99815 * 1 2 3 32 32 H 1.08998 * 109.47519 * 180.02562 * 1 2 3 33 33 H 1.09004 * 109.46694 * 179.97438 * 3 2 1 34 34 H 1.08996 * 109.47334 * 300.00074 * 3 2 1 35 35 H 1.08998 * 109.47398 * 60.00427 * 3 2 1 36 36 H 1.09000 * 109.47143 * 300.00270 * 4 2 1 37 37 H 1.08996 * 109.47021 * 60.00131 * 4 2 1 38 38 H 1.08995 * 109.46725 * 180.02562 * 4 2 1 39 39 H 1.08004 * 120.82322 * 0.02562 * 6 5 2 40 40 H 0.97003 * 119.99857 * 147.14406 * 8 7 6 41 41 H 1.08001 * 119.75183 * 359.97136 * 12 11 9 42 42 H 1.08999 * 109.47736 * 89.70624 * 15 14 13 43 43 H 0.96693 * 113.99931 * 300.00084 * 16 15 14 44 44 H 1.08004 * 125.67298 * 180.25625 * 21 14 13 45 45 H 1.08002 * 120.23423 * 180.19260 * 26 24 23 46 46 H 1.08000 * 119.67127 * 180.27188 * 27 7 6 47 47 H 1.07991 * 119.53550 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8782 -1.5211 5 6 2.4856 -0.8806 1.5252 6 6 2.7128 -0.1772 2.6965 7 6 3.1819 -0.8750 3.8070 8 7 3.4317 -0.2081 5.0109 9 6 3.8682 1.0670 4.9969 10 8 4.1366 1.6061 3.9405 11 6 4.0205 1.8086 6.2634 12 6 4.4622 3.1002 6.2494 13 7 4.6057 3.7930 7.4102 14 6 5.0197 5.0711 7.6785 15 6 5.4506 6.1027 6.6679 16 8 6.0370 5.4492 5.5404 17 14 6.7010 7.2462 7.4424 18 1 7.8823 6.4619 7.8839 19 1 6.0917 7.9253 8.6140 20 1 7.1261 8.2624 6.4465 21 6 4.9635 5.2349 9.0173 22 7 4.5340 4.0969 9.5694 23 6 4.3135 3.2055 8.6154 24 6 3.8594 1.8685 8.6547 25 35 3.4458 1.0511 10.3089 26 6 3.7099 1.1794 7.4953 27 6 3.3925 -2.2437 3.7030 28 7 3.1578 -2.8758 2.5703 29 6 2.7187 -2.2433 1.4997 30 1 -0.3633 0.5139 0.8900 31 1 -0.3633 0.5138 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 3.5740 1.7564 0.0005 34 1 2.1206 2.2703 -0.8899 35 1 2.1207 2.2703 0.8900 36 1 2.1206 -1.9059 -1.5211 37 1 2.1206 -0.3644 -2.4111 38 1 3.5739 -0.8786 -1.5209 39 1 2.5340 0.8868 2.7466 40 1 3.2907 -0.6632 5.8558 41 1 4.6995 3.5753 5.3090 42 1 4.5836 6.6783 6.3438 43 1 6.8155 4.9174 5.7550 44 1 5.2224 6.1364 9.5529 45 1 3.3605 0.1576 7.5111 46 1 3.7518 -2.7959 4.5588 47 1 2.5390 -2.7974 0.5904 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915418_12335884.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:30:54 Heat of formation + Delta-G solvation = 34.791664 kcal Electronic energy + Delta-G solvation = -32610.985306 eV Core-core repulsion = 28158.406014 eV Total energy + Delta-G solvation = -4452.579292 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 448.048 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -44.33691 -42.03451 -40.45499 -38.58715 -38.03857 -36.47144 -35.31406 -33.24505 -32.68843 -31.91979 -30.88088 -30.28081 -29.40221 -28.35955 -28.28168 -26.93526 -26.14700 -24.68228 -24.14646 -23.79149 -22.62167 -21.84422 -19.68254 -19.43022 -18.36638 -18.16883 -17.91413 -17.63966 -17.39485 -17.19523 -16.48526 -16.21478 -16.01515 -15.83576 -15.73137 -15.20465 -14.94513 -14.88593 -14.82905 -14.48346 -14.17264 -14.04409 -13.81380 -13.76146 -13.49969 -13.43782 -13.32646 -13.15708 -13.11912 -13.08943 -12.95731 -12.74054 -12.12508 -12.11460 -12.08136 -11.98878 -11.57394 -11.43182 -11.39751 -11.31886 -11.15397 -10.90193 -10.79427 -10.38914 -10.14827 -10.13999 -9.39196 -9.13577 -1.00026 -0.47563 -0.00384 0.14542 0.25781 0.85745 1.03693 1.30104 1.50279 1.54779 1.69102 1.69844 1.76732 1.94994 1.99081 2.06407 2.14148 2.61103 2.74797 2.89009 2.98587 3.12134 3.23940 3.39977 3.44274 3.66489 3.76783 3.84349 4.00577 4.14818 4.20696 4.28728 4.31305 4.37224 4.41112 4.45949 4.80837 4.82738 4.86578 4.87855 4.88888 4.90631 4.91781 5.01369 5.04627 5.13961 5.21510 5.50488 5.57705 5.66274 5.69706 5.74426 6.04846 6.35096 6.44512 6.71799 6.97661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.459 4.459 2 Si 1.131 2.869 3 C -0.465 4.465 4 C -0.458 4.458 5 C -0.414 4.414 6 C -0.062 4.062 7 C 0.075 3.925 8 N -0.647 5.647 9 C 0.582 3.418 10 O -0.537 6.537 11 C -0.170 4.170 12 C 0.170 3.830 13 N -0.357 5.357 14 C -0.080 4.080 15 C -0.051 4.051 16 O -0.551 6.551 17 Si 1.011 2.989 18 H -0.262 1.262 19 H -0.238 1.238 20 H -0.261 1.261 21 C 0.030 3.970 22 N -0.493 5.493 23 C 0.227 3.773 24 C -0.079 4.079 25 Br 0.006 6.994 26 C -0.025 4.025 27 C 0.083 3.917 28 N -0.499 5.499 29 C 0.099 3.901 30 H 0.064 0.936 31 H 0.078 0.922 32 H 0.073 0.927 33 H 0.062 0.938 34 H 0.078 0.922 35 H 0.062 0.938 36 H 0.079 0.921 37 H 0.078 0.922 38 H 0.068 0.932 39 H 0.140 0.860 40 H 0.429 0.571 41 H 0.200 0.800 42 H 0.140 0.860 43 H 0.390 0.610 44 H 0.211 0.789 45 H 0.186 0.814 46 H 0.179 0.821 47 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.728 0.828 -1.653 1.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.566 4.566 2 Si 1.318 2.682 3 C -0.571 4.571 4 C -0.566 4.566 5 C -0.454 4.454 6 C -0.090 4.090 7 C -0.021 4.021 8 N -0.294 5.294 9 C 0.370 3.630 10 O -0.414 6.414 11 C -0.177 4.177 12 C 0.044 3.956 13 N -0.031 5.031 14 C -0.191 4.191 15 C -0.160 4.160 16 O -0.357 6.357 17 Si 0.830 3.170 18 H -0.186 1.186 19 H -0.161 1.161 20 H -0.185 1.185 21 C -0.119 4.119 22 N -0.212 5.212 23 C -0.019 4.019 24 C -0.162 4.162 25 Br 0.091 6.909 26 C -0.051 4.051 27 C -0.077 4.077 28 N -0.208 5.208 29 C -0.058 4.058 30 H 0.083 0.917 31 H 0.097 0.903 32 H 0.092 0.908 33 H 0.081 0.919 34 H 0.097 0.903 35 H 0.082 0.918 36 H 0.098 0.902 37 H 0.098 0.902 38 H 0.087 0.913 39 H 0.158 0.842 40 H 0.269 0.731 41 H 0.217 0.783 42 H 0.157 0.843 43 H 0.239 0.761 44 H 0.228 0.772 45 H 0.203 0.797 46 H 0.196 0.804 47 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges -0.491 0.818 -0.767 1.225 hybrid contribution 0.184 0.376 -0.127 0.438 sum -0.308 1.195 -0.894 1.524 Atomic orbital electron populations 1.26226 1.20805 1.04869 1.04664 0.77119 0.65588 0.64071 0.61405 1.26335 1.06144 1.20120 1.04494 1.26199 1.06429 1.08765 1.15202 1.28935 1.04275 1.00664 1.11540 1.21679 0.93889 1.01119 0.92283 1.18910 1.01542 0.93634 0.87980 1.43037 1.65076 1.12652 1.08597 1.17635 0.76232 0.81464 0.87681 1.90872 1.49651 1.68492 1.32381 1.18989 1.10731 0.94330 0.93685 1.22300 0.91507 0.91523 0.90290 1.42712 1.41978 1.11472 1.06894 1.22470 1.12728 0.85862 0.98072 1.25047 1.06311 0.96279 0.88361 1.86498 1.48640 1.68263 1.32284 0.84846 0.76202 0.77031 0.78900 1.18597 1.16116 1.18485 1.22945 1.00737 0.97941 0.90279 1.70820 1.19814 1.01066 1.29483 1.20711 1.04539 0.95249 0.81383 1.20548 1.08840 0.91596 0.95166 1.96857 1.92328 1.77661 1.24045 1.21354 0.94386 1.01348 0.88007 1.22981 0.97438 0.90187 0.97054 1.67699 1.12274 1.40655 1.00159 1.23077 0.93640 0.92395 0.96656 0.91659 0.90295 0.90785 0.91878 0.90332 0.91850 0.90175 0.90247 0.91303 0.84197 0.73069 0.78329 0.84266 0.76106 0.77237 0.79689 0.80435 0.80770 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.46 1.85 8.65 113.37 0.98 2.83 16 2 Si 1.13 -5.73 12.38 68.60 0.85 -4.88 16 3 C -0.46 0.69 8.59 113.37 0.97 1.66 16 4 C -0.46 2.25 8.54 113.37 0.97 3.22 16 5 C -0.41 -0.07 4.59 22.34 0.10 0.03 16 6 C -0.06 -0.15 8.00 22.59 0.18 0.03 16 7 C 0.08 0.07 6.31 38.26 0.24 0.31 16 8 N -0.65 2.45 5.30 -306.02 -1.62 0.83 16 9 C 0.58 -0.10 7.52 86.70 0.65 0.56 16 10 O -0.54 -3.24 13.97 -4.03 -0.06 -3.30 16 11 C -0.17 0.35 5.84 -20.35 -0.12 0.23 16 12 C 0.17 -0.07 9.91 83.65 0.83 0.76 16 13 N -0.36 -0.64 2.93 -337.70 -0.99 -1.63 16 14 C -0.08 0.02 6.24 41.01 0.26 0.27 16 15 C -0.05 0.25 3.06 71.24 0.22 0.46 16 16 O -0.55 2.04 10.92 -148.98 -1.63 0.42 16 17 Si 1.01 -5.73 26.60 68.60 1.83 -3.90 16 18 H -0.26 0.86 7.11 99.48 0.71 1.57 16 19 H -0.24 1.52 6.84 99.48 0.68 2.20 16 20 H -0.26 0.71 7.11 99.48 0.71 1.42 16 21 C 0.03 0.05 10.44 83.68 0.87 0.93 16 22 N -0.49 -3.63 11.30 -194.10 -2.19 -5.82 16 23 C 0.23 1.14 7.59 134.18 1.02 2.16 16 24 C -0.08 -0.11 6.24 22.42 0.14 0.03 16 25 Br 0.01 0.01 33.72 -20.37 -0.69 -0.68 16 26 C -0.03 0.10 9.26 22.56 0.21 0.31 16 27 C 0.08 0.09 11.12 84.85 0.94 1.03 16 28 N -0.50 -2.36 10.35 -195.30 -2.02 -4.38 16 29 C 0.10 0.16 10.46 84.70 0.89 1.05 16 30 H 0.06 -0.19 7.96 -2.39 -0.02 -0.21 16 31 H 0.08 -0.38 7.96 -2.39 -0.02 -0.40 16 32 H 0.07 -0.31 7.96 -2.39 -0.02 -0.33 16 33 H 0.06 0.03 7.96 -2.38 -0.02 0.01 16 34 H 0.08 -0.22 7.96 -2.39 -0.02 -0.24 16 35 H 0.06 -0.01 7.78 -2.39 -0.02 -0.03 16 36 H 0.08 -0.50 7.71 -2.39 -0.02 -0.52 16 37 H 0.08 -0.43 7.96 -2.39 -0.02 -0.45 16 38 H 0.07 -0.25 7.96 -2.39 -0.02 -0.27 16 39 H 0.14 0.42 6.07 -2.91 -0.02 0.40 16 40 H 0.43 -4.61 6.87 -92.71 -0.64 -5.24 16 41 H 0.20 -0.21 6.20 -2.91 -0.02 -0.23 16 42 H 0.14 -1.00 7.96 -2.39 -0.02 -1.02 16 43 H 0.39 -3.38 8.70 -74.06 -0.64 -4.02 16 44 H 0.21 -0.82 6.72 -2.91 -0.02 -0.84 16 45 H 0.19 -2.10 6.46 -2.91 -0.02 -2.12 16 46 H 0.18 -0.88 8.06 -2.91 -0.02 -0.90 16 47 H 0.18 -0.60 7.45 -2.92 -0.02 -0.62 16 Total: 0.00 -22.67 416.61 3.34 -19.33 By element: Atomic # 1 Polarization: -12.35 SS G_CDS: 0.50 Total: -11.85 kcal Atomic # 6 Polarization: 6.51 SS G_CDS: 9.35 Total: 15.86 kcal Atomic # 7 Polarization: -4.18 SS G_CDS: -6.83 Total: -11.01 kcal Atomic # 8 Polarization: -1.19 SS G_CDS: -1.68 Total: -2.88 kcal Atomic # 14 Polarization: -11.46 SS G_CDS: 2.67 Total: -8.78 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -22.67 3.34 -19.33 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915418_12335884.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.126 kcal (2) G-P(sol) polarization free energy of solvation -22.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.335 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.334 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds