Wall clock time and date at job start Thu Mar 4 2021 12:31:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 N 1.28467 * 124.88106 * 2 1 4 4 C 1.31824 * 110.06836 * 180.02562 * 3 2 1 5 5 C 1.47677 * 126.52161 * 179.97438 * 4 3 2 6 6 O 1.21582 * 120.00491 * 179.97438 * 5 4 3 7 7 N 1.34783 * 119.99673 * 359.97438 * 5 4 3 8 8 C 1.39881 * 119.99964 * 174.73132 * 7 5 4 9 9 C 1.39257 * 120.49001 * 327.13396 * 8 7 5 10 10 C 1.38545 * 118.35824 * 179.78384 * 9 8 7 11 11 Si 1.86799 * 120.37991 * 180.21334 * 10 9 8 12 12 C 1.86295 * 109.47116 * 270.29520 * 11 10 9 13 13 C 1.86302 * 109.47007 * 30.29758 * 11 10 9 14 14 C 1.86300 * 109.46952 * 150.29723 * 11 10 9 15 15 C 1.38232 * 119.23524 * 0.50477 * 10 9 8 16 16 N 1.31887 * 120.92699 * 359.72973 * 15 10 9 17 17 C 1.31780 * 121.80122 * 359.97438 * 16 15 10 18 18 C 1.41517 * 106.95979 * 359.78171 * 4 3 2 19 19 C 1.35037 * 124.87957 * 180.02562 * 2 1 3 20 20 C 1.50694 * 126.38513 * 359.94193 * 19 2 1 21 21 O 1.42903 * 109.47334 * 30.00188 * 20 19 2 22 22 Si 1.86312 * 109.46977 * 149.99802 * 20 19 2 23 23 H 1.48503 * 109.46676 * 60.00156 * 22 20 19 24 24 H 1.48501 * 109.46919 * 179.97438 * 22 20 19 25 25 H 1.48499 * 109.47148 * 300.00108 * 22 20 19 26 26 H 1.09001 * 109.47077 * 269.98068 * 1 2 3 27 27 H 1.09007 * 109.47211 * 29.97243 * 1 2 3 28 28 H 1.08990 * 109.47462 * 149.97461 * 1 2 3 29 29 H 0.96998 * 119.99801 * 354.72630 * 7 5 4 30 30 H 1.08004 * 120.81921 * 359.97438 * 9 8 7 31 31 H 1.09000 * 109.47188 * 60.00190 * 12 11 10 32 32 H 1.08995 * 109.47283 * 179.97438 * 12 11 10 33 33 H 1.09001 * 109.47105 * 300.00309 * 12 11 10 34 34 H 1.09001 * 109.46952 * 60.00221 * 13 11 10 35 35 H 1.09004 * 109.46496 * 179.97438 * 13 11 10 36 36 H 1.09000 * 109.47107 * 299.99694 * 13 11 10 37 37 H 1.08992 * 109.47251 * 59.99949 * 14 11 10 38 38 H 1.09003 * 109.47168 * 180.02562 * 14 11 10 39 39 H 1.09003 * 109.47420 * 299.99538 * 14 11 10 40 40 H 1.08003 * 119.53436 * 179.70586 * 15 10 9 41 41 H 1.07994 * 119.67254 * 179.97438 * 17 16 15 42 42 H 1.07996 * 127.24878 * 180.24561 * 18 4 3 43 43 H 1.08997 * 109.47639 * 269.99715 * 20 19 2 44 44 H 0.96695 * 113.99865 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4741 0.7168 -0.0006 5 6 4.6272 1.6395 -0.0013 6 8 5.7597 1.1973 -0.0013 7 7 4.4240 2.9719 -0.0019 8 6 5.5111 3.8452 0.1086 9 6 6.6290 3.4904 0.8595 10 6 7.6824 4.3870 0.9354 11 14 9.2118 3.9664 1.9220 12 6 8.9955 4.5450 3.6796 13 6 9.4752 2.1222 1.9033 14 6 10.6900 4.8125 1.1671 15 6 7.5862 5.5989 0.2775 16 7 6.5113 5.9071 -0.4218 17 6 5.4895 5.0813 -0.5248 18 6 3.5271 -0.6973 0.0042 19 6 2.2372 -1.1078 -0.0005 20 6 1.7532 -2.5349 0.0001 21 8 0.4947 -2.6114 -0.6725 22 14 2.9936 -3.6117 -0.8791 23 1 4.3014 -3.5322 -0.1801 24 1 2.5169 -5.0181 -0.8780 25 1 3.1514 -3.1431 -2.2794 26 1 -0.3633 -0.0003 1.0277 27 1 -0.3634 0.8903 -0.5134 28 1 -0.3634 -0.8897 -0.5142 29 1 3.5240 3.3252 -0.0791 30 1 6.6748 2.5384 1.3676 31 1 8.1307 4.0500 4.1213 32 1 9.8877 4.2992 4.2554 33 1 8.8414 5.6240 3.6905 34 1 9.6017 1.7837 0.8749 35 1 10.3679 1.8769 2.4787 36 1 8.6103 1.6272 2.3450 37 1 10.5359 5.8915 1.1781 38 1 11.5825 4.5668 1.7426 39 1 10.8166 4.4740 0.1388 40 1 8.4026 6.3035 0.3373 41 1 4.6261 5.3691 -1.1062 42 1 4.4107 -1.3183 0.0089 43 1 1.6374 -2.8789 1.0278 44 1 0.1227 -3.5031 -0.7106 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915418_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:31:04 Heat of formation + Delta-G solvation = 13.097820 kcal Electronic energy + Delta-G solvation = -25989.693941 eV Core-core repulsion = 22260.670358 eV Total energy + Delta-G solvation = -3729.023583 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 334.137 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.93517 -41.79007 -40.11340 -37.97119 -36.31798 -34.52599 -33.09742 -32.83115 -31.16657 -29.41242 -28.62802 -28.30693 -28.26629 -26.81665 -25.30756 -24.51002 -23.32084 -22.28540 -20.93905 -19.20003 -18.55311 -18.18589 -17.87827 -17.69124 -17.49978 -16.99444 -16.25419 -15.83754 -15.72804 -15.35593 -15.07884 -14.89210 -14.84896 -14.27772 -14.16942 -14.06012 -13.82772 -13.76850 -13.61871 -13.43619 -13.35651 -13.15945 -13.10170 -12.97699 -12.96392 -12.41746 -12.11768 -12.03109 -12.02433 -11.82432 -11.47002 -11.16925 -10.89661 -10.80044 -10.41585 -10.27076 -10.17489 -9.91327 -9.38808 -0.16808 0.15685 0.45345 0.69758 1.13352 1.41540 1.51979 1.53851 1.69060 1.83005 1.97787 1.98929 2.03238 2.13489 2.60340 2.86381 2.98354 3.10390 3.49782 3.61771 3.81506 3.88576 4.11965 4.25303 4.27911 4.31769 4.34317 4.40077 4.47209 4.55609 4.79369 4.82004 4.85927 4.87937 4.88319 4.90705 4.92207 5.01723 5.03363 5.10005 5.13857 5.56590 5.60648 5.65374 5.69437 5.73606 6.07380 6.65012 6.73335 6.82811 6.93987 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.255 5.255 3 N -0.262 5.262 4 C -0.040 4.040 5 C 0.608 3.392 6 O -0.540 6.540 7 N -0.647 5.647 8 C 0.073 3.927 9 C -0.064 4.064 10 C -0.414 4.414 11 Si 1.130 2.870 12 C -0.456 4.456 13 C -0.466 4.466 14 C -0.454 4.454 15 C 0.098 3.902 16 N -0.496 5.496 17 C 0.080 3.920 18 C -0.203 4.203 19 C 0.031 3.969 20 C -0.044 4.044 21 O -0.557 6.557 22 Si 0.991 3.009 23 H -0.262 1.262 24 H -0.233 1.233 25 H -0.284 1.284 26 H 0.099 0.901 27 H 0.099 0.901 28 H 0.136 0.864 29 H 0.428 0.572 30 H 0.137 0.863 31 H 0.063 0.937 32 H 0.081 0.919 33 H 0.074 0.926 34 H 0.060 0.940 35 H 0.080 0.920 36 H 0.060 0.940 37 H 0.081 0.919 38 H 0.081 0.919 39 H 0.068 0.932 40 H 0.180 0.820 41 H 0.174 0.826 42 H 0.168 0.832 43 H 0.120 0.880 44 H 0.411 0.589 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.201 -4.660 2.842 7.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.044 5.044 3 N -0.101 5.101 4 C -0.197 4.197 5 C 0.395 3.605 6 O -0.415 6.415 7 N -0.293 5.293 8 C -0.023 4.023 9 C -0.092 4.092 10 C -0.453 4.453 11 Si 1.317 2.683 12 C -0.563 4.563 13 C -0.572 4.572 14 C -0.563 4.563 15 C -0.059 4.059 16 N -0.205 5.205 17 C -0.080 4.080 18 C -0.231 4.231 19 C -0.095 4.095 20 C -0.155 4.155 21 O -0.369 6.369 22 Si 0.813 3.187 23 H -0.186 1.186 24 H -0.155 1.155 25 H -0.209 1.209 26 H 0.117 0.883 27 H 0.118 0.882 28 H 0.154 0.846 29 H 0.267 0.733 30 H 0.155 0.845 31 H 0.082 0.918 32 H 0.100 0.900 33 H 0.093 0.907 34 H 0.080 0.920 35 H 0.100 0.900 36 H 0.079 0.921 37 H 0.100 0.900 38 H 0.100 0.900 39 H 0.087 0.913 40 H 0.197 0.803 41 H 0.191 0.809 42 H 0.186 0.814 43 H 0.137 0.863 44 H 0.265 0.735 Dipole moment (debyes) X Y Z Total from point charges -4.746 -3.186 1.895 6.022 hybrid contribution -0.613 -1.496 0.338 1.652 sum -5.359 -4.682 2.233 7.458 Atomic orbital electron populations 1.22915 0.70171 1.07827 1.06103 1.45751 1.09309 1.01636 1.47672 1.73457 1.02424 1.15038 1.19179 1.21446 0.90733 0.93896 1.13664 1.17105 0.86905 0.81359 0.75101 1.90802 1.23507 1.77351 1.49858 1.43146 1.10087 1.04542 1.71567 1.19046 0.90749 0.92819 0.99671 1.21678 0.92668 1.00064 0.94814 1.29074 1.12441 0.96591 1.07219 0.77179 0.61279 0.65285 0.64595 1.26189 1.04971 1.06432 1.18745 1.26351 1.04875 1.21790 1.04184 1.26152 1.14415 1.08432 1.07264 1.23128 0.95238 0.95607 0.91946 1.67684 1.01439 1.33842 1.17535 1.22891 0.98300 0.89693 0.97084 1.21610 0.97376 0.93635 1.10452 1.21232 0.90235 0.90966 1.07020 1.24271 0.94518 0.92992 1.03763 1.86229 1.34067 1.37335 1.79240 0.85127 0.77230 0.78088 0.78270 1.18642 1.15535 1.20941 0.88287 0.88209 0.84592 0.73309 0.84498 0.91795 0.90022 0.90653 0.92049 0.90046 0.92079 0.90007 0.89999 0.91323 0.80267 0.80936 0.81418 0.86280 0.73548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.38 11.00 127.77 1.41 1.03 16 2 N -0.25 -0.56 3.70 -355.93 -1.32 -1.88 16 3 N -0.26 -1.59 11.68 -48.18 -0.56 -2.15 16 4 C -0.04 -0.35 7.13 42.45 0.30 -0.04 16 5 C 0.61 6.44 7.59 86.74 0.66 7.09 16 6 O -0.54 -8.46 14.63 -3.97 -0.06 -8.52 16 7 N -0.65 -4.15 5.35 -305.90 -1.64 -5.79 16 8 C 0.07 0.60 6.31 38.26 0.24 0.84 16 9 C -0.06 -0.54 8.00 22.59 0.18 -0.36 16 10 C -0.41 -1.76 4.59 22.34 0.10 -1.66 16 11 Si 1.13 -2.69 12.38 68.60 0.85 -1.84 16 12 C -0.46 0.92 8.65 113.37 0.98 1.90 16 13 C -0.47 -0.69 8.59 113.37 0.97 0.29 16 14 C -0.45 1.44 8.54 113.37 0.97 2.41 16 15 C 0.10 0.51 10.45 84.68 0.89 1.39 16 16 N -0.50 -4.51 10.35 -195.31 -2.02 -6.53 16 17 C 0.08 0.57 11.12 84.86 0.94 1.51 16 18 C -0.20 -1.27 9.35 22.41 0.21 -1.06 16 19 C 0.03 0.06 6.21 41.40 0.26 0.31 16 20 C -0.04 0.28 2.98 71.23 0.21 0.49 16 21 O -0.56 5.13 9.76 -148.98 -1.45 3.68 16 22 Si 0.99 -3.81 26.64 68.60 1.83 -1.98 16 23 H -0.26 0.20 6.87 99.48 0.68 0.89 16 24 H -0.23 1.48 7.11 99.48 0.71 2.19 16 25 H -0.28 -0.77 7.11 99.48 0.71 -0.06 16 26 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 27 H 0.10 -0.67 8.14 -2.38 -0.02 -0.69 16 28 H 0.14 -1.04 5.19 -2.39 -0.01 -1.05 16 29 H 0.43 0.79 8.55 -92.71 -0.79 -0.01 16 30 H 0.14 1.28 6.07 -2.91 -0.02 1.26 16 31 H 0.06 -0.03 7.96 -2.39 -0.02 -0.05 16 32 H 0.08 -0.27 7.96 -2.39 -0.02 -0.29 16 33 H 0.07 -0.19 7.96 -2.39 -0.02 -0.21 16 34 H 0.06 0.23 7.96 -2.39 -0.02 0.21 16 35 H 0.08 -0.06 7.96 -2.38 -0.02 -0.08 16 36 H 0.06 0.20 7.78 -2.39 -0.02 0.18 16 37 H 0.08 -0.39 7.71 -2.39 -0.02 -0.41 16 38 H 0.08 -0.34 7.96 -2.39 -0.02 -0.36 16 39 H 0.07 -0.13 7.96 -2.39 -0.02 -0.14 16 40 H 0.18 -0.16 7.45 -2.91 -0.02 -0.19 16 41 H 0.17 0.33 8.06 -2.91 -0.02 0.31 16 42 H 0.17 0.85 6.87 -2.91 -0.02 0.83 16 43 H 0.12 -1.38 7.96 -2.39 -0.02 -1.40 16 44 H 0.41 -7.56 8.74 -74.06 -0.65 -8.21 16 Total: 0.00 -23.26 372.51 4.28 -18.98 By element: Atomic # 1 Polarization: -8.46 SS G_CDS: 0.33 Total: -8.13 kcal Atomic # 6 Polarization: 5.83 SS G_CDS: 8.32 Total: 14.15 kcal Atomic # 7 Polarization: -10.81 SS G_CDS: -5.54 Total: -16.35 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -1.51 Total: -4.84 kcal Atomic # 14 Polarization: -6.50 SS G_CDS: 2.68 Total: -3.82 kcal Total: -23.26 4.28 -18.98 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915418_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.078 kcal (2) G-P(sol) polarization free energy of solvation -23.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.981 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.098 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds