Wall clock time and date at job start Thu Mar 4 2021 12:37:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86307 * 111.63857 * 2 1 4 4 C 1.90172 * 111.97332 * 126.44645 * 2 1 3 5 5 C 1.55212 * 98.86219 * 88.86184 * 4 2 1 6 6 N 1.45017 * 116.01047 * 20.25113 * 5 4 2 7 7 C 1.34777 * 120.85988 * 180.84542 * 6 5 4 8 8 O 1.21593 * 120.00009 * 185.20203 * 7 6 5 9 9 C 1.47576 * 119.99994 * 5.20587 * 7 6 5 10 10 C 1.36492 * 120.01480 * 75.26011 * 9 7 6 11 11 N 1.35943 * 120.50786 * 180.24933 * 10 9 7 12 12 C 1.37004 * 132.41527 * 179.67581 * 11 10 9 13 13 C 1.50704 * 126.42716 * 0.04856 * 12 11 10 14 14 O 1.42897 * 109.47111 * 29.99478 * 13 12 11 15 15 Si 1.86300 * 109.47154 * 149.99859 * 13 12 11 16 16 H 1.48500 * 109.47043 * 59.99810 * 15 13 12 17 17 H 1.48501 * 109.47055 * 180.02562 * 15 13 12 18 18 H 1.48505 * 109.47022 * 299.99807 * 15 13 12 19 19 C 1.35000 * 107.14495 * 180.02562 * 12 11 10 20 20 N 1.33597 * 108.65247 * 359.43718 * 19 12 11 21 21 C 1.32417 * 109.21898 * 0.67728 * 20 19 12 22 22 C 1.41251 * 132.11318 * 179.23579 * 21 20 19 23 23 Br 1.89105 * 120.25604 * 359.97438 * 22 21 20 24 24 C 1.35708 * 119.48817 * 180.02562 * 22 21 20 25 25 C 1.48273 * 118.27794 * 1.11249 * 6 5 4 26 26 H 1.09005 * 109.47199 * 293.55662 * 1 2 3 27 27 H 1.09005 * 109.46957 * 53.55124 * 1 2 3 28 28 H 1.08992 * 109.47152 * 173.54975 * 1 2 3 29 29 H 1.09001 * 109.46682 * 186.44820 * 3 2 1 30 30 H 1.08997 * 109.46900 * 306.44440 * 3 2 1 31 31 H 1.08998 * 109.46987 * 66.45164 * 3 2 1 32 32 H 1.09001 * 111.51598 * 331.45059 * 4 2 1 33 33 H 1.08998 * 111.57093 * 206.29711 * 4 2 1 34 34 H 1.09004 * 108.15029 * 258.59468 * 5 4 2 35 35 H 1.08993 * 108.12340 * 141.88425 * 5 4 2 36 36 H 1.08005 * 119.74467 * 359.97438 * 10 9 7 37 37 H 1.09000 * 109.46999 * 269.99769 * 13 12 11 38 38 H 0.96703 * 113.99978 * 60.00627 * 14 13 12 39 39 H 1.07998 * 125.67346 * 180.02562 * 19 12 11 40 40 H 1.07995 * 120.23301 * 179.97438 * 24 22 21 41 41 H 1.08997 * 111.30190 * 95.92688 * 25 6 5 42 42 H 1.09003 * 111.30585 * 220.54189 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5500 1.7318 0.0000 4 6 2.5745 -1.0477 1.4186 5 6 2.6358 -2.4196 0.6953 6 7 2.6236 -2.3754 -0.7541 7 6 2.6563 -3.5101 -1.4807 8 8 2.7410 -3.4540 -2.6924 9 6 2.5891 -4.8207 -0.8056 10 6 1.4016 -5.2712 -0.3057 11 7 1.3293 -6.4746 0.3225 12 6 0.2917 -7.1500 0.9091 13 6 -1.1381 -6.6837 1.0068 14 8 -1.4462 -5.8539 -0.1150 15 14 -2.2736 -8.1606 1.0175 16 1 -1.9533 -9.0228 2.1834 17 1 -3.6825 -7.7011 1.1132 18 1 -2.0901 -8.9351 -0.2362 19 6 0.7901 -8.3117 1.3827 20 7 2.0928 -8.3680 1.0916 21 6 2.4453 -7.2620 0.4545 22 6 3.6851 -6.8165 -0.0550 23 35 5.2315 -7.8893 0.1286 24 6 3.7581 -5.6123 -0.6764 25 6 2.5804 -1.0494 -1.4161 26 1 -0.3634 0.4107 0.9421 27 1 -0.3633 0.6106 -0.8267 28 1 -0.3633 -1.0211 -0.1154 29 1 3.6332 1.6929 -0.1154 30 1 2.1165 2.2946 -0.8267 31 1 2.3023 2.2209 0.9421 32 1 1.8981 -1.0761 2.2729 33 1 3.5672 -0.7052 1.7108 34 1 1.7841 -3.0151 1.0241 35 1 3.5456 -2.9295 1.0119 36 1 0.5135 -4.6648 -0.4060 37 1 -1.2727 -6.1152 1.9270 38 1 -1.3480 -6.2956 -0.9697 39 1 0.2273 -9.0736 1.9015 40 1 4.6999 -5.2598 -1.0701 41 1 3.5791 -0.7129 -1.6944 42 1 1.9138 -1.0588 -2.2785 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915426_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:37:14 Heat of formation + Delta-G solvation = 2.119900 kcal Electronic energy + Delta-G solvation = -27151.042681 eV Core-core repulsion = 23302.688587 eV Total energy + Delta-G solvation = -3848.354095 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 397.037 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -44.19195 -41.16836 -38.53793 -38.08096 -37.20036 -35.23870 -32.63462 -31.79915 -31.38346 -30.36546 -29.45387 -28.73823 -27.82071 -26.94918 -25.19772 -24.06232 -23.59833 -22.47348 -20.72973 -19.41465 -18.85585 -18.11518 -17.69247 -17.45542 -17.12827 -16.84524 -16.37774 -16.02314 -15.92734 -15.45415 -15.25589 -14.93234 -14.64943 -14.43191 -14.25618 -14.18960 -13.95420 -13.83647 -13.59666 -13.48979 -13.42498 -13.30901 -13.28304 -13.02328 -12.79609 -12.70316 -12.28411 -12.17456 -11.49999 -11.38944 -11.24377 -11.18888 -11.17340 -10.97653 -10.95302 -10.80830 -9.97544 -9.68473 -9.02130 -0.78281 -0.22124 0.26789 0.80627 1.02657 1.14115 1.31331 1.37229 1.48076 1.52602 1.55810 1.59382 1.80038 1.86366 2.12033 2.18324 2.85961 2.91787 3.02912 3.33266 3.44630 3.49331 3.59372 3.88552 3.92708 4.13402 4.20492 4.37565 4.40041 4.46663 4.49528 4.51083 4.51755 4.53294 4.55336 4.57409 4.75905 4.85680 4.89558 5.00561 5.26057 5.29673 5.30871 5.33149 5.63578 6.09537 6.10003 6.57431 6.91799 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.441 4.441 2 Si 0.984 3.016 3 C -0.440 4.440 4 C -0.399 4.399 5 C 0.101 3.899 6 N -0.591 5.591 7 C 0.574 3.426 8 O -0.512 6.512 9 C -0.148 4.148 10 C 0.121 3.879 11 N -0.347 5.347 12 C -0.092 4.092 13 C -0.049 4.049 14 O -0.543 6.543 15 Si 0.970 3.030 16 H -0.242 1.242 17 H -0.244 1.244 18 H -0.247 1.247 19 C 0.043 3.957 20 N -0.463 5.463 21 C 0.243 3.757 22 C -0.060 4.060 23 Br 0.009 6.991 24 C -0.031 4.031 25 C -0.175 4.175 26 H 0.076 0.924 27 H 0.075 0.925 28 H 0.072 0.928 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.076 0.924 32 H 0.097 0.903 33 H 0.093 0.907 34 H 0.064 0.936 35 H 0.067 0.933 36 H 0.184 0.816 37 H 0.127 0.873 38 H 0.380 0.620 39 H 0.190 0.810 40 H 0.158 0.842 41 H 0.080 0.920 42 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.281 4.997 3.480 6.917 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.550 4.550 2 Si 1.180 2.820 3 C -0.549 4.549 4 C -0.485 4.485 5 C -0.022 4.022 6 N -0.325 5.325 7 C 0.360 3.640 8 O -0.387 6.387 9 C -0.155 4.155 10 C -0.004 4.004 11 N -0.020 5.020 12 C -0.203 4.203 13 C -0.159 4.159 14 O -0.348 6.348 15 Si 0.788 3.212 16 H -0.165 1.165 17 H -0.167 1.167 18 H -0.170 1.170 19 C -0.108 4.108 20 N -0.181 5.181 21 C -0.002 4.002 22 C -0.142 4.142 23 Br 0.094 6.906 24 C -0.058 4.058 25 C -0.342 4.342 26 H 0.095 0.905 27 H 0.094 0.906 28 H 0.091 0.909 29 H 0.094 0.906 30 H 0.094 0.906 31 H 0.095 0.905 32 H 0.116 0.884 33 H 0.112 0.888 34 H 0.082 0.918 35 H 0.085 0.915 36 H 0.201 0.799 37 H 0.144 0.856 38 H 0.228 0.772 39 H 0.207 0.793 40 H 0.175 0.825 41 H 0.099 0.901 42 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.902 3.671 3.584 5.894 hybrid contribution -0.201 0.614 -0.654 0.919 sum -3.103 4.285 2.930 6.048 Atomic orbital electron populations 1.25964 1.18880 1.05023 1.05116 0.80626 0.68281 0.67341 0.65724 1.25941 1.07004 1.16886 1.05099 1.26577 1.08087 1.04046 1.09801 1.21083 1.02569 0.99404 0.79135 1.47977 1.72667 1.05560 1.06253 1.17586 0.77229 0.82696 0.86531 1.90875 1.48174 1.86570 1.13091 1.19365 0.93268 0.97890 1.05011 1.21891 0.99847 0.85827 0.92818 1.42520 1.09534 1.13589 1.36380 1.22000 0.91486 0.96628 1.10236 1.24816 0.91764 1.06290 0.92994 1.86467 1.90764 1.41151 1.16458 0.85430 0.78396 0.74670 0.82657 1.16520 1.16739 1.17015 1.22489 0.91232 0.96031 1.01082 1.70863 1.12960 1.18143 1.16179 1.20390 0.87457 0.89554 1.02783 1.20455 0.91230 0.96896 1.05624 1.96852 1.28858 1.67941 1.96925 1.20974 0.98811 0.91111 0.94856 1.27166 1.07125 0.90299 1.09606 0.90504 0.90582 0.90891 0.90616 0.90640 0.90501 0.88403 0.88836 0.91794 0.91495 0.79887 0.85584 0.77185 0.79339 0.82485 0.90134 0.89019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 1.57 8.65 101.05 0.87 2.45 16 2 Si 0.98 -4.57 13.66 -169.99 -2.32 -6.89 16 3 C -0.44 1.74 8.65 101.05 0.87 2.62 16 4 C -0.40 1.63 6.06 38.33 0.23 1.86 16 5 C 0.10 -0.22 5.19 -3.67 -0.02 -0.24 16 6 N -0.59 0.19 3.08 -112.08 -0.34 -0.16 16 7 C 0.57 1.24 7.08 -12.45 -0.09 1.15 16 8 O -0.51 -3.07 17.07 5.28 0.09 -2.98 16 9 C -0.15 -0.16 4.48 -105.37 -0.47 -0.63 16 10 C 0.12 0.02 9.15 -16.36 -0.15 -0.12 16 11 N -0.35 -0.50 2.93 -58.09 -0.17 -0.67 16 12 C -0.09 -0.02 6.24 -81.43 -0.51 -0.53 16 13 C -0.05 0.11 3.06 36.01 0.11 0.22 16 14 O -0.54 1.14 10.90 -35.23 -0.38 0.75 16 15 Si 0.97 -2.45 26.60 -169.99 -4.52 -6.97 16 16 H -0.24 0.61 6.84 56.52 0.39 1.00 16 17 H -0.24 0.34 7.11 56.52 0.40 0.74 16 18 H -0.25 0.32 7.11 56.52 0.40 0.72 16 19 C 0.04 0.06 10.44 -17.93 -0.19 -0.13 16 20 N -0.46 -1.95 11.31 -12.70 -0.14 -2.09 16 21 C 0.24 0.83 7.59 -155.92 -1.18 -0.35 16 22 C -0.06 -0.15 6.24 -39.34 -0.25 -0.40 16 23 Br 0.01 0.02 33.72 -68.01 -2.29 -2.27 16 24 C -0.03 -0.04 9.54 -39.14 -0.37 -0.42 16 25 C -0.17 0.25 5.73 60.82 0.35 0.60 16 26 H 0.08 -0.29 7.96 -51.93 -0.41 -0.71 16 27 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 28 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 29 H 0.07 -0.28 7.96 -51.93 -0.41 -0.69 16 30 H 0.07 -0.28 7.96 -51.93 -0.41 -0.70 16 31 H 0.08 -0.31 7.96 -51.93 -0.41 -0.72 16 32 H 0.10 -0.47 8.06 -51.93 -0.42 -0.89 16 33 H 0.09 -0.40 8.06 -51.93 -0.42 -0.82 16 34 H 0.06 -0.17 7.13 -51.93 -0.37 -0.54 16 35 H 0.07 -0.12 8.11 -51.93 -0.42 -0.54 16 36 H 0.18 -0.28 6.70 -52.48 -0.35 -0.63 16 37 H 0.13 -0.46 7.96 -51.93 -0.41 -0.87 16 38 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 39 H 0.19 -0.26 6.72 -52.49 -0.35 -0.61 16 40 H 0.16 0.01 8.06 -52.49 -0.42 -0.42 16 41 H 0.08 -0.11 8.06 -51.93 -0.42 -0.53 16 42 H 0.09 -0.06 7.90 -51.93 -0.41 -0.47 16 LS Contribution 371.66 15.07 5.60 5.60 Total: 0.00 -8.61 371.66 -10.17 -18.78 By element: Atomic # 1 Polarization: -4.28 SS G_CDS: -4.89 Total: -9.18 kcal Atomic # 6 Polarization: 6.85 SS G_CDS: -0.79 Total: 6.07 kcal Atomic # 7 Polarization: -2.25 SS G_CDS: -0.66 Total: -2.91 kcal Atomic # 8 Polarization: -1.94 SS G_CDS: -0.29 Total: -2.23 kcal Atomic # 14 Polarization: -7.01 SS G_CDS: -6.84 Total: -13.85 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -8.61 -10.17 -18.78 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915426_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.897 kcal (2) G-P(sol) polarization free energy of solvation -8.607 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.170 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.777 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds