Wall clock time and date at job start Thu Mar 4 2021 12:37:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 N 1.28466 * 124.88552 * 2 1 4 4 C 1.31812 * 110.07200 * 180.15996 * 3 2 1 5 5 C 1.47711 * 126.51588 * 179.81871 * 4 3 2 6 6 O 1.21565 * 119.99856 * 174.40756 * 5 4 3 7 7 N 1.34780 * 119.99832 * 354.68428 * 5 4 3 8 8 C 1.45785 * 121.16776 * 184.31981 * 7 5 4 9 9 C 1.56385 * 112.11122 * 147.15098 * 8 7 5 10 10 Si 1.90272 * 97.25580 * 38.38196 * 9 8 7 11 11 C 1.86304 * 111.84980 * 213.44820 * 10 9 8 12 12 C 1.86307 * 111.85105 * 87.42053 * 10 9 8 13 13 C 1.47936 * 121.17294 * 4.60278 * 7 5 4 14 14 C 1.41502 * 106.96320 * 359.55447 * 4 3 2 15 15 C 1.35035 * 124.88201 * 179.65745 * 2 1 3 16 16 C 1.50698 * 126.38824 * 0.02562 * 15 2 1 17 17 O 1.42897 * 109.47319 * 329.97312 * 16 15 2 18 18 Si 1.86308 * 109.47140 * 209.97361 * 16 15 2 19 19 H 1.48499 * 109.46905 * 59.99882 * 18 16 15 20 20 H 1.48497 * 109.46887 * 180.02562 * 18 16 15 21 21 H 1.48497 * 109.46820 * 300.00113 * 18 16 15 22 22 H 1.08998 * 109.47517 * 270.33828 * 1 2 3 23 23 H 1.09002 * 109.47328 * 30.34383 * 1 2 3 24 24 H 1.09011 * 109.47220 * 150.33710 * 1 2 3 25 25 H 1.09004 * 108.92895 * 268.02299 * 8 7 5 26 26 H 1.09002 * 108.93388 * 26.54469 * 8 7 5 27 27 H 1.08993 * 111.97957 * 281.31245 * 9 8 7 28 28 H 1.09002 * 111.74570 * 155.36511 * 9 8 7 29 29 H 1.09000 * 109.47223 * 167.67265 * 11 10 9 30 30 H 1.08998 * 109.46964 * 287.67274 * 11 10 9 31 31 H 1.09004 * 109.46658 * 47.67497 * 11 10 9 32 32 H 1.09003 * 109.46498 * 312.32447 * 12 10 9 33 33 H 1.08993 * 109.46747 * 72.32152 * 12 10 9 34 34 H 1.08999 * 109.47005 * 192.32979 * 12 10 9 35 35 H 1.08990 * 110.97719 * 305.14160 * 13 7 5 36 36 H 1.08999 * 110.97590 * 68.92293 * 13 7 5 37 37 H 1.07995 * 127.24781 * 180.26405 * 14 4 3 38 38 H 1.09004 * 109.47382 * 89.97280 * 16 15 2 39 39 H 0.96700 * 114.00207 * 300.00398 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7168 -0.0035 5 6 4.6273 1.6398 -0.0084 6 8 5.7568 1.2016 0.0914 7 7 4.4268 2.9681 -0.1178 8 6 5.5479 3.8944 -0.2191 9 6 5.2074 5.1358 -1.1073 10 14 3.4093 5.3604 -0.5270 11 6 2.3140 5.9956 -1.8936 12 6 3.3001 6.4315 0.9935 13 6 3.0617 3.5378 -0.1332 14 6 3.5271 -0.6972 0.0047 15 6 2.2372 -1.1077 0.0066 16 6 1.7533 -2.5349 0.0146 17 8 0.4955 -2.6076 0.6887 18 14 2.9946 -3.6066 0.8988 19 1 3.1536 -3.1299 2.2962 20 1 2.5180 -5.0130 0.9061 21 1 4.3018 -3.5310 0.1982 22 1 -0.3634 0.0061 1.0276 23 1 -0.3634 0.8869 -0.5192 24 1 -0.3634 -0.8931 -0.5086 25 1 5.8175 4.2341 0.7809 26 1 6.4002 3.3721 -0.6540 27 1 5.2635 4.9041 -2.1709 28 1 5.8255 5.9966 -0.8523 29 1 1.2698 5.9037 -1.5947 30 1 2.5455 7.0429 -2.0877 31 1 2.4858 5.4118 -2.7980 32 1 4.0317 6.0950 1.7281 33 1 3.5059 7.4672 0.7238 34 1 2.2988 6.3585 1.4181 35 1 2.4559 3.0784 -0.9142 36 1 2.5843 3.4332 0.8411 37 1 4.4107 -1.3181 0.0085 38 1 1.6366 -2.8847 -1.0111 39 1 0.5245 -2.3110 1.6087 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915426_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:37:22 Heat of formation + Delta-G solvation = -12.291506 kcal Electronic energy + Delta-G solvation = -20830.596308 eV Core-core repulsion = 17706.113713 eV Total energy + Delta-G solvation = -3124.482596 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 283.126 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -43.86574 -40.66697 -38.03617 -37.00547 -34.45539 -32.80401 -31.34641 -29.15458 -28.46123 -28.40230 -27.22987 -26.76357 -24.79986 -22.67535 -21.87399 -20.29343 -18.81866 -17.82750 -17.65167 -17.15914 -16.94862 -16.57865 -15.83737 -15.82237 -15.17006 -14.99890 -14.56419 -14.37789 -14.17106 -13.91644 -13.82756 -13.63640 -13.54138 -13.42604 -13.32322 -13.11839 -12.97125 -12.60387 -12.57531 -12.43463 -12.10428 -11.83160 -11.58525 -10.95911 -10.85459 -10.54058 -10.40748 -10.22688 -9.98585 -9.68441 0.41846 0.73046 1.12157 1.39701 1.45832 1.48468 1.62733 1.81952 1.92602 1.96903 2.04295 2.25405 2.45657 3.14096 3.27697 3.34650 3.79088 4.04001 4.25843 4.32045 4.38364 4.44470 4.51032 4.57553 4.73170 4.74978 4.75577 4.81395 4.83083 4.83975 4.86900 4.94203 5.01626 5.15169 5.28535 5.53543 5.59729 5.66033 5.70395 6.16906 6.46950 6.74739 7.04211 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.076 3.924 2 N -0.263 5.263 3 N -0.246 5.246 4 C -0.040 4.040 5 C 0.589 3.411 6 O -0.582 6.582 7 N -0.585 5.585 8 C 0.097 3.903 9 C -0.413 4.413 10 Si 1.066 2.934 11 C -0.445 4.445 12 C -0.449 4.449 13 C -0.195 4.195 14 C -0.208 4.208 15 C -0.008 4.008 16 C -0.040 4.040 17 O -0.539 6.539 18 Si 0.997 3.003 19 H -0.266 1.266 20 H -0.252 1.252 21 H -0.265 1.265 22 H 0.105 0.895 23 H 0.102 0.898 24 H 0.120 0.880 25 H 0.073 0.927 26 H 0.060 0.940 27 H 0.084 0.916 28 H 0.112 0.888 29 H 0.078 0.922 30 H 0.082 0.918 31 H 0.069 0.931 32 H 0.066 0.934 33 H 0.084 0.916 34 H 0.078 0.922 35 H 0.086 0.914 36 H 0.076 0.924 37 H 0.159 0.841 38 H 0.147 0.853 39 H 0.391 0.609 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.345 2.770 -0.312 7.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.052 5.052 3 N -0.084 5.084 4 C -0.197 4.197 5 C 0.377 3.623 6 O -0.462 6.462 7 N -0.316 5.316 8 C -0.025 4.025 9 C -0.497 4.497 10 Si 1.256 2.744 11 C -0.554 4.554 12 C -0.557 4.557 13 C -0.359 4.359 14 C -0.237 4.237 15 C -0.134 4.134 16 C -0.152 4.152 17 O -0.346 6.346 18 Si 0.819 3.181 19 H -0.190 1.190 20 H -0.175 1.175 21 H -0.190 1.190 22 H 0.123 0.877 23 H 0.121 0.879 24 H 0.139 0.861 25 H 0.091 0.909 26 H 0.079 0.921 27 H 0.103 0.897 28 H 0.131 0.869 29 H 0.097 0.903 30 H 0.101 0.899 31 H 0.088 0.912 32 H 0.085 0.915 33 H 0.103 0.897 34 H 0.097 0.903 35 H 0.104 0.896 36 H 0.094 0.906 37 H 0.176 0.824 38 H 0.164 0.836 39 H 0.241 0.759 Dipole moment (debyes) X Y Z Total from point charges -7.232 2.714 -0.376 7.734 hybrid contribution 0.879 -0.620 0.381 1.141 sum -6.353 2.094 0.005 6.689 Atomic orbital electron populations 1.22696 0.70156 1.06959 1.06407 1.45925 1.09262 1.01770 1.48233 1.73774 1.02289 1.13707 1.18658 1.21706 0.91230 0.93983 1.12805 1.17391 0.86387 0.82291 0.76264 1.90743 1.24623 1.77874 1.52959 1.47965 1.08759 1.04447 1.70420 1.21642 0.88623 0.91248 1.01000 1.27142 1.21887 0.98350 1.02316 0.79482 0.65347 0.62250 0.67275 1.26010 1.10154 1.07001 1.12252 1.26068 1.05101 1.10176 1.14393 1.27585 0.83027 1.19738 1.05587 1.21663 0.97603 0.93814 1.10581 1.22208 0.90461 0.92741 1.07985 1.24669 0.94272 0.91183 1.05060 1.86486 1.28887 1.88739 1.30451 0.85013 0.76254 0.78065 0.78745 1.19032 1.17540 1.18992 0.87675 0.87931 0.86126 0.90894 0.92095 0.89712 0.86904 0.90254 0.89854 0.91223 0.91474 0.89723 0.90331 0.89596 0.90570 0.82378 0.83590 0.75884 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.56 10.12 127.77 1.29 0.73 16 2 N -0.26 -0.40 3.70 -355.92 -1.32 -1.72 16 3 N -0.25 -1.65 8.93 -48.17 -0.43 -2.08 16 4 C -0.04 -0.46 6.91 42.46 0.29 -0.17 16 5 C 0.59 8.88 7.71 86.75 0.67 9.55 16 6 O -0.58 -12.76 16.58 -3.92 -0.07 -12.83 16 7 N -0.58 -4.76 3.23 -623.03 -2.01 -6.78 16 8 C 0.10 0.48 5.82 87.69 0.51 0.99 16 9 C -0.41 1.05 6.21 73.16 0.45 1.50 16 10 Si 1.07 -6.93 13.58 68.60 0.93 -6.00 16 11 C -0.44 2.95 8.65 113.37 0.98 3.93 16 12 C -0.45 2.73 8.65 113.37 0.98 3.71 16 13 C -0.20 -0.26 4.29 127.49 0.55 0.29 16 14 C -0.21 -1.82 9.35 22.41 0.21 -1.61 16 15 C -0.01 -0.02 6.18 41.40 0.26 0.24 16 16 C -0.04 0.16 2.87 71.24 0.20 0.36 16 17 O -0.54 3.50 10.40 -148.98 -1.55 1.95 16 18 Si 1.00 -1.40 26.63 68.60 1.83 0.43 16 19 H -0.27 -0.35 7.11 99.48 0.71 0.36 16 20 H -0.25 0.14 7.11 99.48 0.71 0.85 16 21 H -0.27 -0.56 6.87 99.48 0.68 0.12 16 22 H 0.10 -1.14 8.14 -2.39 -0.02 -1.16 16 23 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 24 H 0.12 -1.11 6.77 -2.38 -0.02 -1.13 16 25 H 0.07 0.23 8.14 -2.38 -0.02 0.21 16 26 H 0.06 0.60 7.43 -2.39 -0.02 0.58 16 27 H 0.08 -0.15 8.07 -2.39 -0.02 -0.17 16 28 H 0.11 -0.65 8.07 -2.39 -0.02 -0.67 16 29 H 0.08 -0.57 7.96 -2.39 -0.02 -0.59 16 30 H 0.08 -0.63 7.96 -2.39 -0.02 -0.65 16 31 H 0.07 -0.36 7.96 -2.38 -0.02 -0.38 16 32 H 0.07 -0.28 7.96 -2.39 -0.02 -0.30 16 33 H 0.08 -0.62 7.96 -2.39 -0.02 -0.64 16 34 H 0.08 -0.51 7.96 -2.39 -0.02 -0.52 16 35 H 0.09 0.19 6.83 -2.39 -0.02 0.17 16 36 H 0.08 0.12 7.90 -2.39 -0.02 0.10 16 37 H 0.16 1.39 6.86 -2.91 -0.02 1.37 16 38 H 0.15 -1.02 7.96 -2.38 -0.02 -1.04 16 39 H 0.39 -4.56 8.70 -74.06 -0.64 -5.20 16 Total: 0.00 -22.04 321.71 4.92 -17.12 By element: Atomic # 1 Polarization: -10.76 SS G_CDS: 1.13 Total: -9.62 kcal Atomic # 6 Polarization: 13.13 SS G_CDS: 6.40 Total: 19.53 kcal Atomic # 7 Polarization: -6.82 SS G_CDS: -3.76 Total: -10.58 kcal Atomic # 8 Polarization: -9.26 SS G_CDS: -1.61 Total: -10.88 kcal Atomic # 14 Polarization: -8.33 SS G_CDS: 2.76 Total: -5.57 kcal Total: -22.04 4.92 -17.12 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915426_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.831 kcal (2) G-P(sol) polarization free energy of solvation -22.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds