Wall clock time and date at job start Thu Mar 4 2021 12:54:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86294 * 110.00891 * 2 1 4 4 C 1.87573 * 110.02941 * 121.38482 * 2 1 3 5 5 C 1.53925 * 106.83643 * 163.10563 * 4 2 1 6 6 N 1.46443 * 109.45687 * 301.99180 * 5 4 2 7 7 N 1.36610 * 111.00083 * 204.96910 * 6 5 4 8 8 C 1.34769 * 120.00075 * 119.99801 * 7 6 5 9 9 O 1.21726 * 120.00104 * 0.02562 * 8 7 6 10 10 C 1.46566 * 120.00075 * 180.02562 * 8 7 6 11 11 C 1.40852 * 126.58085 * 180.02562 * 10 8 7 12 12 C 1.40092 * 132.86624 * 0.28663 * 11 10 8 13 13 C 1.36443 * 119.25454 * 180.24216 * 12 11 10 14 14 C 1.50699 * 120.29509 * 179.71463 * 13 12 11 15 15 O 1.42903 * 109.47152 * 119.73265 * 14 13 12 16 16 Si 1.86305 * 109.47184 * 239.72737 * 14 13 12 17 17 H 1.48499 * 109.47126 * 300.00092 * 16 14 13 18 18 H 1.48496 * 109.46885 * 60.00303 * 16 14 13 19 19 H 1.48499 * 109.46850 * 180.02562 * 16 14 13 20 20 C 1.40159 * 119.41080 * 359.45168 * 13 12 11 21 21 C 1.35190 * 120.31698 * 0.28777 * 20 13 12 22 22 N 1.36244 * 120.70742 * 0.02562 * 21 20 13 23 23 N 1.40015 * 132.01348 * 179.97438 * 22 21 20 24 24 C 1.30741 * 109.60050 * 180.02562 * 23 22 21 25 25 C 1.46448 * 113.64273 * 79.02371 * 6 5 4 26 26 C 1.53923 * 109.45445 * 280.97814 * 25 6 5 27 27 H 1.09000 * 109.47170 * 298.61294 * 1 2 3 28 28 H 1.08995 * 109.47318 * 58.61939 * 1 2 3 29 29 H 1.09004 * 109.46812 * 178.61577 * 1 2 3 30 30 H 1.08999 * 109.47170 * 181.37998 * 3 2 1 31 31 H 1.08995 * 109.47519 * 301.38651 * 3 2 1 32 32 H 1.09001 * 109.47242 * 61.38925 * 3 2 1 33 33 H 1.09003 * 109.97967 * 43.77511 * 4 2 1 34 34 H 1.09003 * 110.05553 * 282.47714 * 4 2 1 35 35 H 1.08996 * 109.47509 * 181.99595 * 5 4 2 36 36 H 1.08996 * 109.47412 * 61.98754 * 5 4 2 37 37 H 0.97002 * 119.99585 * 300.00086 * 7 6 5 38 38 H 1.07998 * 120.37399 * 359.96594 * 12 11 10 39 39 H 1.08997 * 109.47198 * 359.72943 * 14 13 12 40 40 H 0.96700 * 114.00311 * 180.02562 * 15 14 13 41 41 H 1.08004 * 119.84694 * 180.27467 * 20 13 12 42 42 H 1.07997 * 119.64791 * 179.97438 * 21 20 13 43 43 H 1.08005 * 125.62426 * 179.97438 * 24 23 22 44 44 H 1.08994 * 109.47090 * 40.97007 * 25 6 5 45 45 H 1.08993 * 109.47296 * 160.98313 * 25 6 5 46 46 H 1.09002 * 109.97991 * 298.67568 * 26 25 6 47 47 H 1.09006 * 110.05494 * 177.38270 * 26 25 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5005 1.7505 0.0000 4 6 2.5055 -0.9178 1.5044 5 6 3.9826 -1.2500 1.2269 6 7 4.0816 -2.0464 0.0019 7 7 5.2167 -2.8065 0.0026 8 6 5.1286 -4.1492 -0.0716 9 8 4.0376 -4.6847 -0.1396 10 6 6.3464 -4.9648 -0.0703 11 6 6.4158 -6.3697 -0.1425 12 6 5.4382 -7.3687 -0.2366 13 6 5.8238 -8.6766 -0.2854 14 6 4.7916 -9.7704 -0.3802 15 8 4.9980 -10.5174 -1.5809 16 14 4.9499 -10.9030 1.0905 17 1 6.3078 -11.5040 1.1086 18 1 4.7354 -10.1269 2.3382 19 1 3.9332 -11.9812 0.9967 20 6 7.1887 -8.9934 -0.2521 21 6 8.1151 -8.0125 -0.1665 22 7 7.7397 -6.7040 -0.1108 23 7 8.4808 -5.5195 -0.0207 24 6 7.6690 -4.4950 0.0045 25 6 3.9826 -1.2522 -1.2245 26 6 2.5055 -0.9205 -1.5027 27 1 -0.3633 0.4921 0.9022 28 1 -0.3634 0.5351 -0.8773 29 1 -0.3633 -1.0274 -0.0248 30 1 3.5901 1.7404 -0.0247 31 1 2.1219 2.2751 -0.8772 32 1 2.1624 2.2603 0.9022 33 1 1.9381 -1.8370 1.6503 34 1 2.4257 -0.2867 2.3896 35 1 4.3908 -1.8174 2.0632 36 1 4.5464 -0.3251 1.1056 37 1 6.0861 -2.3797 0.0564 38 1 4.3908 -7.1067 -0.2657 39 1 3.7949 -9.3294 -0.3935 40 1 4.3677 -11.2396 -1.7081 41 1 7.5020 -10.0261 -0.2948 42 1 9.1639 -8.2690 -0.1412 43 1 7.9657 -3.4587 0.0709 44 1 4.5465 -0.3271 -1.1048 45 1 4.3908 -1.8211 -2.0598 46 1 1.9381 -1.8399 -1.6469 47 1 2.4243 -0.2902 -2.3884 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_11618758.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:54:46 Heat of formation + Delta-G solvation = 39.748492 kcal Electronic energy + Delta-G solvation = -28348.438891 eV Core-core repulsion = 24465.033349 eV Total energy + Delta-G solvation = -3883.405542 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 348.153 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -43.23433 -40.66617 -39.21393 -38.17807 -37.30343 -34.25821 -33.85502 -32.12466 -32.10864 -30.53865 -29.33092 -28.44748 -28.21078 -27.00456 -24.87122 -23.90011 -23.59823 -22.94075 -21.93351 -21.09805 -19.20251 -18.67737 -18.39652 -17.78224 -17.25478 -16.87962 -16.74033 -16.43917 -15.99835 -15.83830 -15.69703 -15.02323 -14.85501 -14.73997 -14.38751 -14.24997 -14.13712 -14.02520 -13.78492 -13.63835 -13.49998 -13.27814 -13.27542 -13.11029 -13.05722 -12.97465 -12.80711 -12.67332 -12.27412 -12.25493 -12.04168 -11.86517 -11.50024 -10.87931 -10.73812 -10.66411 -10.45812 -10.25788 -10.22694 -10.07765 -9.58089 -8.71469 -0.52371 -0.06487 0.99183 1.03613 1.15714 1.35920 1.41174 1.74223 1.80083 1.82001 1.88997 1.94849 2.09872 2.62479 2.70864 3.01617 3.13776 3.43009 3.48086 3.61827 3.74493 3.90375 4.03727 4.18465 4.19337 4.28874 4.31078 4.31934 4.33830 4.49194 4.59225 4.67252 4.69330 4.71232 4.73333 4.79592 4.79910 4.81271 4.90846 5.00334 5.15561 5.20832 5.29578 5.40134 5.45978 5.54870 5.56854 5.70039 5.98945 6.35539 6.42217 6.49999 6.64868 7.79149 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.444 4.444 2 Si 0.995 3.005 3 C -0.448 4.448 4 C -0.398 4.398 5 C 0.056 3.944 6 N -0.310 5.310 7 N -0.579 5.579 8 C 0.617 3.383 9 O -0.523 6.523 10 C -0.312 4.312 11 C 0.170 3.830 12 C -0.092 4.092 13 C -0.031 4.031 14 C -0.083 4.083 15 O -0.541 6.541 16 Si 0.947 3.053 17 H -0.243 1.243 18 H -0.247 1.247 19 H -0.246 1.246 20 C -0.144 4.144 21 C 0.114 3.886 22 N -0.264 5.264 23 N -0.313 5.313 24 C 0.118 3.882 25 C 0.055 3.945 26 C -0.398 4.398 27 H 0.068 0.932 28 H 0.068 0.932 29 H 0.071 0.929 30 H 0.065 0.935 31 H 0.069 0.931 32 H 0.069 0.931 33 H 0.088 0.912 34 H 0.081 0.919 35 H 0.080 0.920 36 H 0.042 0.958 37 H 0.377 0.623 38 H 0.166 0.834 39 H 0.085 0.915 40 H 0.385 0.615 41 H 0.164 0.836 42 H 0.178 0.822 43 H 0.197 0.803 44 H 0.041 0.959 45 H 0.079 0.921 46 H 0.088 0.912 47 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.521 -0.486 0.802 1.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.552 4.552 2 Si 1.191 2.809 3 C -0.555 4.555 4 C -0.484 4.484 5 C -0.071 4.071 6 N -0.128 5.128 7 N -0.323 5.323 8 C 0.406 3.594 9 O -0.397 6.397 10 C -0.328 4.328 11 C 0.049 3.951 12 C -0.112 4.112 13 C -0.036 4.036 14 C -0.192 4.192 15 O -0.348 6.348 16 Si 0.766 3.234 17 H -0.166 1.166 18 H -0.170 1.170 19 H -0.169 1.169 20 C -0.166 4.166 21 C -0.012 4.012 22 N -0.029 5.029 23 N -0.133 5.133 24 C -0.063 4.063 25 C -0.072 4.072 26 C -0.485 4.485 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.091 0.909 30 H 0.084 0.916 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.107 0.893 34 H 0.100 0.900 35 H 0.098 0.902 36 H 0.060 0.940 37 H 0.215 0.785 38 H 0.183 0.817 39 H 0.103 0.897 40 H 0.233 0.767 41 H 0.181 0.819 42 H 0.195 0.805 43 H 0.214 0.786 44 H 0.060 0.940 45 H 0.097 0.903 46 H 0.107 0.893 47 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 1.271 -1.550 1.431 2.463 hybrid contribution -0.059 1.120 -0.363 1.179 sum 1.212 -0.430 1.069 1.672 Atomic orbital electron populations 1.26028 1.20196 1.04687 1.04327 0.79619 0.67491 0.66343 0.67456 1.26129 1.06066 1.18785 1.04539 1.26242 0.99239 1.08843 1.14118 1.22224 0.97849 0.95600 0.91455 1.61435 1.22671 1.26248 1.02418 1.44911 1.04031 1.05118 1.78276 1.16601 0.87370 0.79937 0.75497 1.90767 1.28411 1.71549 1.49002 1.19498 0.93784 0.90728 1.28832 1.19176 0.84513 0.93947 0.97486 1.20704 1.00604 0.89337 1.00516 1.19415 0.93976 0.93650 0.96585 1.24721 0.99124 0.97266 0.98123 1.86487 1.59158 1.48903 1.40240 0.85752 0.82285 0.78966 0.76395 1.16628 1.17013 1.16879 1.20854 0.91702 1.00270 1.03749 1.21592 1.01883 0.78363 0.99373 1.46084 1.05617 1.06261 1.44894 1.77630 1.17250 0.87972 1.30493 1.24044 0.90185 0.98869 0.93213 1.22244 0.97753 0.95617 0.91555 1.26238 0.99301 1.08847 1.14074 0.91269 0.91270 0.90940 0.91559 0.91145 0.91151 0.89310 0.89980 0.90183 0.93951 0.78462 0.81700 0.89740 0.76654 0.81862 0.80487 0.78634 0.94041 0.90261 0.89288 0.90018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.33 8.65 101.05 0.87 1.20 16 2 Si 0.99 -1.81 11.76 -169.99 -2.00 -3.81 16 3 C -0.45 0.68 8.65 101.05 0.87 1.55 16 4 C -0.40 0.18 5.24 37.64 0.20 0.38 16 5 C 0.06 0.01 5.61 -3.59 -0.02 -0.01 16 6 N -0.31 -0.51 4.00 -113.40 -0.45 -0.96 16 7 N -0.58 -0.77 4.62 30.24 0.14 -0.63 16 8 C 0.62 2.53 7.89 -12.91 -0.10 2.42 16 9 O -0.52 -3.92 16.03 5.17 0.08 -3.83 16 10 C -0.31 -0.97 6.17 -104.68 -0.65 -1.61 16 11 C 0.17 0.60 6.76 -84.07 -0.57 0.03 16 12 C -0.09 -0.22 9.35 -39.53 -0.37 -0.59 16 13 C -0.03 -0.02 4.53 -104.55 -0.47 -0.49 16 14 C -0.08 0.11 2.81 36.01 0.10 0.21 16 15 O -0.54 0.66 12.76 -35.23 -0.45 0.21 16 16 Si 0.95 -1.69 27.26 -169.99 -4.63 -6.33 16 17 H -0.24 0.32 7.04 56.52 0.40 0.71 16 18 H -0.25 0.05 7.11 56.52 0.40 0.45 16 19 H -0.25 0.42 7.11 56.52 0.40 0.83 16 20 C -0.14 0.06 8.67 -39.95 -0.35 -0.29 16 21 C 0.11 0.02 11.17 -16.68 -0.19 -0.17 16 22 N -0.26 -0.75 3.86 -10.54 -0.04 -0.79 16 23 N -0.31 -0.98 12.57 30.75 0.39 -0.59 16 24 C 0.12 0.14 11.44 -17.14 -0.20 -0.06 16 25 C 0.06 0.02 5.61 -3.59 -0.02 0.00 16 26 C -0.40 0.10 5.24 37.64 0.20 0.29 16 27 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 28 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H 0.07 -0.01 7.96 -51.93 -0.41 -0.43 16 30 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 31 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 32 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 33 H 0.09 0.09 7.99 -51.93 -0.42 -0.33 16 34 H 0.08 -0.12 8.00 -51.93 -0.42 -0.54 16 35 H 0.08 0.06 8.04 -51.93 -0.42 -0.36 16 36 H 0.04 -0.06 7.58 -51.93 -0.39 -0.46 16 37 H 0.38 -0.66 7.75 -185.15 -1.43 -2.09 16 38 H 0.17 0.41 7.01 -52.49 -0.37 0.05 16 39 H 0.08 -0.22 7.71 -51.93 -0.40 -0.62 16 40 H 0.39 -2.13 8.74 45.56 0.40 -1.73 16 41 H 0.16 -0.43 7.50 -52.48 -0.39 -0.83 16 42 H 0.18 -0.49 8.06 -52.49 -0.42 -0.91 16 43 H 0.20 -0.61 7.46 -52.48 -0.39 -1.00 16 44 H 0.04 -0.05 7.58 -51.93 -0.39 -0.45 16 45 H 0.08 0.10 8.04 -51.93 -0.42 -0.31 16 46 H 0.09 0.11 7.99 -51.93 -0.42 -0.30 16 47 H 0.08 -0.10 7.99 -51.93 -0.42 -0.52 16 LS Contribution 387.11 15.07 5.83 5.83 Total: 0.00 -9.98 387.11 -9.39 -19.37 By element: Atomic # 1 Polarization: -3.77 SS G_CDS: -7.57 Total: -11.34 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: -0.68 Total: 2.88 kcal Atomic # 7 Polarization: -3.01 SS G_CDS: 0.03 Total: -2.98 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.37 Total: -3.63 kcal Atomic # 14 Polarization: -3.50 SS G_CDS: -6.63 Total: -10.13 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -9.98 -9.39 -19.37 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_11618758.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.118 kcal (2) G-P(sol) polarization free energy of solvation -9.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.393 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.369 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds