Wall clock time and date at job start Thu Mar 4 2021 12:55:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.37677 * 119.95258 * 2 1 4 4 C 1.39752 * 119.91225 * 180.02562 * 3 2 1 5 5 C 1.47602 * 120.09344 * 180.02562 * 4 3 2 6 6 O 1.21582 * 120.00525 * 179.97438 * 5 4 3 7 7 N 1.34780 * 119.99695 * 359.97438 * 5 4 3 8 8 N 1.36601 * 119.99931 * 180.02562 * 7 5 4 9 9 C 1.46443 * 110.99746 * 247.40265 * 8 7 5 10 10 C 1.53927 * 109.46057 * 155.03154 * 9 8 7 11 11 Si 1.87575 * 106.83728 * 58.00715 * 10 9 8 12 12 C 1.86293 * 110.03100 * 196.90051 * 11 10 9 13 13 C 1.86295 * 110.11442 * 75.46997 * 11 10 9 14 14 C 1.87577 * 106.56473 * 316.16192 * 11 10 9 15 15 C 1.46438 * 111.00068 * 120.00151 * 8 7 5 16 16 C 1.39721 * 119.82019 * 359.75014 * 4 3 2 17 17 C 1.37718 * 119.90966 * 0.49732 * 16 4 3 18 18 C 1.50698 * 119.95337 * 179.74857 * 17 16 4 19 19 O 1.42895 * 109.47614 * 254.73317 * 18 17 16 20 20 Si 1.86300 * 109.47338 * 14.73317 * 18 17 16 21 21 H 1.48503 * 109.46942 * 299.99993 * 20 18 17 22 22 H 1.48503 * 109.47276 * 59.99467 * 20 18 17 23 23 H 1.48494 * 109.47372 * 179.97438 * 20 18 17 24 24 C 1.38972 * 120.08970 * 359.48609 * 17 16 4 25 25 O 1.35715 * 119.91291 * 180.26994 * 24 17 16 26 26 H 1.09000 * 109.47092 * 270.02027 * 1 2 3 27 27 H 1.09001 * 109.47171 * 30.02533 * 1 2 3 28 28 H 1.08999 * 109.46925 * 150.01849 * 1 2 3 29 29 H 1.08008 * 120.05028 * 359.97438 * 3 2 1 30 30 H 0.96999 * 120.00178 * 359.97438 * 7 5 4 31 31 H 1.08995 * 109.47462 * 275.02695 * 9 8 7 32 32 H 1.09006 * 109.47278 * 35.03224 * 9 8 7 33 33 H 1.09004 * 109.97929 * 298.67850 * 10 9 8 34 34 H 1.08996 * 110.05840 * 177.38196 * 10 9 8 35 35 H 1.09000 * 109.47441 * 177.12826 * 12 11 10 36 36 H 1.09005 * 109.46969 * 297.12610 * 12 11 10 37 37 H 1.09001 * 109.47500 * 57.12756 * 12 11 10 38 38 H 1.08996 * 109.47489 * 302.82532 * 13 11 10 39 39 H 1.09000 * 109.47184 * 62.82550 * 13 11 10 40 40 H 1.09000 * 109.47180 * 182.82337 * 13 11 10 41 41 H 1.08994 * 109.97844 * 284.50823 * 14 11 10 42 42 H 1.09001 * 110.04949 * 163.21207 * 14 11 10 43 43 H 1.08997 * 109.47289 * 324.96247 * 15 8 7 44 44 H 1.08998 * 109.47598 * 84.96622 * 15 8 7 45 45 H 1.08005 * 120.04256 * 180.25791 * 16 4 3 46 46 H 1.09001 * 109.47122 * 134.73392 * 18 17 16 47 47 H 0.96698 * 114.00355 * 180.02562 * 19 18 17 48 48 H 0.96698 * 113.99583 * 89.99212 * 25 24 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1945 1.1929 0.0000 4 6 3.5920 1.1919 -0.0005 5 6 4.3330 2.4685 0.0000 6 8 5.5488 2.4657 0.0000 7 7 3.6618 3.6372 0.0005 8 7 4.3475 4.8186 0.0005 9 6 4.1570 5.5359 1.2630 10 6 5.3527 6.4746 1.5049 11 14 5.4423 7.6312 0.0309 12 6 7.1140 8.4507 -0.0364 13 6 4.1038 8.9218 0.1469 14 6 5.1837 6.5728 -1.4959 15 6 4.0192 5.6159 -1.1831 16 6 4.2859 -0.0208 0.0042 17 6 3.5909 -1.2097 -0.0010 18 6 4.3384 -2.5182 -0.0016 19 8 4.2711 -3.1048 -1.3029 20 14 6.1200 -2.2160 0.4518 21 1 6.7334 -1.2950 -0.5386 22 1 6.1901 -1.6064 1.8042 23 1 6.8564 -3.5055 0.4518 24 6 2.2012 -1.2044 -0.0001 25 8 1.5199 -2.3782 0.0003 26 1 -0.3633 0.0004 1.0277 27 1 -0.3633 0.8898 -0.5142 28 1 -0.3633 -0.8901 -0.5135 29 1 1.6545 2.1283 -0.0004 30 1 2.6918 3.6395 0.0002 31 1 3.2393 6.1219 1.2131 32 1 4.0864 4.8191 2.0812 33 1 6.2725 5.8945 1.5795 34 1 5.1990 7.0477 2.4192 35 1 7.1742 9.0811 -0.9237 36 1 7.2546 9.0630 0.8544 37 1 7.8912 7.6878 -0.0794 38 1 3.1319 8.4326 0.2106 39 1 4.2627 9.5312 1.0366 40 1 4.1336 9.5568 -0.7385 41 1 6.0871 6.0021 -1.7109 42 1 4.9296 7.2025 -2.3485 43 1 3.8547 4.9538 -2.0331 44 1 3.1150 6.1940 -0.9926 45 1 5.3660 -0.0257 0.0080 46 1 3.8882 -3.1942 0.7253 47 1 4.7317 -3.9518 -1.3769 48 1 1.3232 -2.7183 0.8839 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915442_13287732.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:55:05 Heat of formation + Delta-G solvation = -83.665406 kcal Electronic energy + Delta-G solvation = -27723.144177 eV Core-core repulsion = 23903.008918 eV Total energy + Delta-G solvation = -3820.135260 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 338.162 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.78707 -40.72632 -38.75643 -37.76521 -37.46143 -34.46670 -34.00929 -32.16030 -31.90340 -29.36876 -28.36905 -28.30384 -27.99768 -26.79269 -24.62357 -23.95376 -22.27533 -21.87808 -21.51899 -19.53653 -19.06588 -18.54735 -18.30489 -17.26498 -16.79228 -16.61246 -16.21896 -15.94909 -15.68341 -15.47491 -15.17362 -14.89916 -14.35212 -14.30671 -14.21546 -13.98393 -13.88887 -13.69796 -13.59808 -13.57098 -13.51788 -13.21211 -13.07082 -13.03969 -12.90566 -12.89373 -12.82392 -12.63922 -12.30714 -12.22259 -11.91016 -11.47342 -11.21369 -10.79182 -10.48265 -10.47379 -10.34973 -10.23617 -9.99356 -9.70042 -9.67065 -0.42272 0.03558 1.07215 1.34797 1.38835 1.50191 1.61107 1.78906 1.85593 1.94181 2.06819 2.52515 2.65931 3.08385 3.20055 3.34478 3.54048 3.63462 3.80581 3.95396 4.12650 4.17085 4.26304 4.28767 4.33380 4.35242 4.44308 4.60801 4.65253 4.65838 4.71451 4.80485 4.80851 4.83423 4.83539 4.86267 4.89087 4.99108 5.01787 5.06016 5.20066 5.30544 5.42288 5.43363 5.57748 5.58787 5.65869 5.91349 6.14788 6.31455 6.75634 6.81481 7.42180 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.119 4.119 3 C -0.055 4.055 4 C -0.148 4.148 5 C 0.574 3.426 6 O -0.560 6.560 7 N -0.562 5.562 8 N -0.340 5.340 9 C 0.053 3.947 10 C -0.414 4.414 11 Si 1.063 2.937 12 C -0.463 4.463 13 C -0.448 4.448 14 C -0.414 4.414 15 C 0.053 3.947 16 C -0.074 4.074 17 C -0.122 4.122 18 C -0.060 4.060 19 O -0.558 6.558 20 Si 0.955 3.045 21 H -0.285 1.285 22 H -0.261 1.261 23 H -0.241 1.241 24 C 0.164 3.836 25 O -0.490 6.490 26 H 0.089 0.911 27 H 0.083 0.917 28 H 0.072 0.928 29 H 0.163 0.837 30 H 0.398 0.602 31 H 0.070 0.930 32 H 0.067 0.933 33 H 0.064 0.936 34 H 0.096 0.904 35 H 0.071 0.929 36 H 0.072 0.928 37 H 0.059 0.941 38 H 0.073 0.927 39 H 0.073 0.927 40 H 0.073 0.927 41 H 0.065 0.935 42 H 0.096 0.904 43 H 0.069 0.931 44 H 0.071 0.929 45 H 0.121 0.879 46 H 0.105 0.895 47 H 0.398 0.602 48 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.440 1.015 3.180 8.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.119 4.119 3 C -0.074 4.074 4 C -0.152 4.152 5 C 0.362 3.638 6 O -0.438 6.438 7 N -0.307 5.307 8 N -0.159 5.159 9 C -0.073 4.073 10 C -0.499 4.499 11 Si 1.255 2.745 12 C -0.569 4.569 13 C -0.557 4.557 14 C -0.499 4.499 15 C -0.074 4.074 16 C -0.093 4.093 17 C -0.123 4.123 18 C -0.171 4.171 19 O -0.366 6.366 20 Si 0.781 3.219 21 H -0.211 1.211 22 H -0.185 1.185 23 H -0.164 1.164 24 C 0.118 3.882 25 O -0.304 6.304 26 H 0.108 0.892 27 H 0.102 0.898 28 H 0.090 0.910 29 H 0.180 0.820 30 H 0.240 0.760 31 H 0.088 0.912 32 H 0.086 0.914 33 H 0.083 0.917 34 H 0.114 0.886 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.078 0.922 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.093 0.907 41 H 0.084 0.916 42 H 0.115 0.885 43 H 0.088 0.912 44 H 0.089 0.911 45 H 0.139 0.861 46 H 0.123 0.877 47 H 0.248 0.752 48 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -5.581 1.600 2.670 6.390 hybrid contribution -0.633 -0.511 0.386 0.901 sum -6.214 1.089 3.056 7.010 Atomic orbital electron populations 1.20773 0.87779 1.04206 1.03902 1.20472 0.98550 0.91534 1.01379 1.21349 0.91217 0.99286 0.95511 1.19675 0.94549 0.91849 1.09155 1.18306 0.86801 0.83238 0.75407 1.90762 1.15406 1.87627 1.49979 1.44893 1.08140 1.01455 1.76200 1.61429 1.52274 0.98171 1.04045 1.22299 0.98862 0.96618 0.89537 1.26470 0.99494 1.08106 1.15851 0.78622 0.66345 0.64833 0.64731 1.26254 1.18347 1.07643 1.04683 1.26112 1.12517 1.11998 1.05026 1.26480 1.00234 1.06820 1.16405 1.22293 0.98427 0.95573 0.91067 1.21063 1.00166 0.91495 0.96535 1.19724 0.93981 0.94011 1.04545 1.24388 1.08776 0.94203 0.89752 1.86502 1.79511 1.41754 1.28881 0.85661 0.76296 0.80522 0.79460 1.21077 1.18509 1.16395 1.18365 0.88303 0.86153 0.95344 1.84732 1.75221 1.35282 1.35172 0.89206 0.89801 0.90951 0.81960 0.75996 0.91244 0.91420 0.91666 0.88579 0.90949 0.90922 0.92163 0.90788 0.90759 0.90748 0.91639 0.88540 0.91234 0.91128 0.86144 0.87692 0.75187 0.72537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.69 9.79 71.24 0.70 1.39 16 2 C -0.12 0.13 5.89 -19.81 -0.12 0.02 16 3 C -0.06 0.06 9.18 22.50 0.21 0.27 16 4 C -0.15 -0.90 5.88 -20.08 -0.12 -1.02 16 5 C 0.57 5.77 7.87 86.71 0.68 6.45 16 6 O -0.56 -11.16 16.66 -3.98 -0.07 -11.23 16 7 N -0.56 -1.64 4.58 -175.76 -0.81 -2.45 16 8 N -0.34 -1.32 4.00 -512.69 -2.05 -3.37 16 9 C 0.05 0.01 5.61 86.70 0.49 0.49 16 10 C -0.41 0.13 5.24 72.29 0.38 0.51 16 11 Si 1.06 -4.31 11.76 68.60 0.81 -3.50 16 12 C -0.46 0.38 8.65 113.37 0.98 1.37 16 13 C -0.45 2.46 8.65 113.37 0.98 3.44 16 14 C -0.41 0.15 5.24 72.29 0.38 0.53 16 15 C 0.05 0.00 5.61 86.70 0.49 0.49 16 16 C -0.07 -0.64 8.20 22.51 0.18 -0.46 16 17 C -0.12 -0.60 5.30 -19.81 -0.11 -0.71 16 18 C -0.06 -0.08 2.36 71.24 0.17 0.09 16 19 O -0.56 -1.72 12.86 -148.98 -1.92 -3.64 16 20 Si 0.95 3.53 25.48 68.60 1.75 5.28 16 21 H -0.28 -3.02 6.74 99.48 0.67 -2.35 16 22 H -0.26 -1.49 7.11 99.48 0.71 -0.79 16 23 H -0.24 -0.33 7.11 99.48 0.71 0.37 16 24 C 0.16 0.28 6.66 22.63 0.15 0.43 16 25 O -0.49 0.72 11.84 -90.36 -1.07 -0.35 16 26 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 27 H 0.08 -0.71 8.08 -2.39 -0.02 -0.73 16 28 H 0.07 -0.31 7.52 -2.39 -0.02 -0.33 16 29 H 0.16 -1.40 6.40 -2.91 -0.02 -1.42 16 30 H 0.40 -1.91 6.85 -215.50 -1.48 -3.38 16 31 H 0.07 -0.37 7.58 -2.39 -0.02 -0.39 16 32 H 0.07 0.15 8.04 -2.38 -0.02 0.13 16 33 H 0.06 0.30 7.99 -2.39 -0.02 0.28 16 34 H 0.10 -0.32 7.99 -2.39 -0.02 -0.34 16 35 H 0.07 -0.10 7.96 -2.39 -0.02 -0.12 16 36 H 0.07 -0.11 7.96 -2.38 -0.02 -0.13 16 37 H 0.06 0.10 7.96 -2.39 -0.02 0.08 16 38 H 0.07 -0.48 7.96 -2.39 -0.02 -0.50 16 39 H 0.07 -0.41 7.96 -2.39 -0.02 -0.42 16 40 H 0.07 -0.41 7.96 -2.39 -0.02 -0.43 16 41 H 0.06 0.29 7.99 -2.39 -0.02 0.27 16 42 H 0.10 -0.32 8.00 -2.39 -0.02 -0.34 16 43 H 0.07 0.14 8.04 -2.39 -0.02 0.12 16 44 H 0.07 -0.39 7.58 -2.39 -0.02 -0.40 16 45 H 0.12 1.46 4.46 -2.91 -0.01 1.45 16 46 H 0.11 -0.53 7.82 -2.39 -0.02 -0.55 16 47 H 0.40 -2.52 8.74 -74.06 -0.65 -3.16 16 48 H 0.41 -4.73 9.06 -74.06 -0.67 -5.40 16 Total: 0.00 -26.29 386.31 1.00 -25.28 By element: Atomic # 1 Polarization: -18.24 SS G_CDS: -1.08 Total: -19.32 kcal Atomic # 6 Polarization: 7.86 SS G_CDS: 5.44 Total: 13.30 kcal Atomic # 7 Polarization: -2.96 SS G_CDS: -2.86 Total: -5.82 kcal Atomic # 8 Polarization: -12.17 SS G_CDS: -3.05 Total: -15.22 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: 2.55 Total: 1.78 kcal Total: -26.29 1.00 -25.28 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_13287732.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.381 kcal (2) G-P(sol) polarization free energy of solvation -26.289 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds