Wall clock time and date at job start Thu Mar 4 2021 13:00:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35990 * 116.99691 * 2 1 4 4 C 1.39113 * 120.06617 * 179.97438 * 3 2 1 5 5 O 1.36021 * 120.07338 * 0.03953 * 4 3 2 6 6 C 1.42902 * 116.99843 * 90.00412 * 5 4 3 7 7 C 1.53003 * 109.47163 * 89.99721 * 6 5 4 8 8 C 1.50695 * 109.47433 * 209.99933 * 6 5 4 9 9 O 1.21281 * 119.99643 * 359.97438 * 8 6 5 10 10 N 1.34777 * 120.00304 * 179.97438 * 8 6 5 11 11 N 1.36598 * 119.99645 * 179.97438 * 10 8 6 12 12 C 1.46448 * 111.00088 * 247.40253 * 11 10 8 13 13 C 1.53920 * 109.45986 * 155.03258 * 12 11 10 14 14 Si 1.87573 * 106.83605 * 58.01173 * 13 12 11 15 15 C 1.86301 * 110.03172 * 196.89286 * 14 13 12 16 16 C 1.86298 * 110.11418 * 75.46777 * 14 13 12 17 17 C 1.87573 * 106.56691 * 316.15846 * 14 13 12 18 18 C 1.46449 * 110.99919 * 120.00588 * 11 10 8 19 19 C 1.38666 * 119.84536 * 180.02562 * 4 3 2 20 20 Cl 1.73600 * 120.00718 * 179.97438 * 19 4 3 21 21 C 1.38333 * 119.98301 * 359.72060 * 19 4 3 22 22 C 1.38258 * 120.12856 * 0.55145 * 21 19 4 23 23 C 1.50696 * 119.92285 * 179.72079 * 22 21 19 24 24 O 1.42903 * 109.47131 * 119.72396 * 23 22 21 25 25 Si 1.86305 * 109.47185 * 359.72936 * 23 22 21 26 26 H 1.48499 * 109.47126 * 179.97438 * 25 23 22 27 27 H 1.48496 * 109.46885 * 299.99843 * 25 23 22 28 28 H 1.48499 * 109.46850 * 59.99646 * 25 23 22 29 29 C 1.38233 * 120.15496 * 359.44867 * 22 21 19 30 30 H 1.08999 * 109.47269 * 60.00270 * 1 2 3 31 31 H 1.09006 * 109.46524 * 179.97438 * 1 2 3 32 32 H 1.08996 * 109.47154 * 299.99626 * 1 2 3 33 33 H 1.09001 * 109.47384 * 329.99962 * 6 5 4 34 34 H 1.09000 * 109.47126 * 180.02562 * 7 6 5 35 35 H 1.08999 * 109.47135 * 300.00099 * 7 6 5 36 36 H 1.09001 * 109.46774 * 59.99868 * 7 6 5 37 37 H 0.96998 * 119.99618 * 359.97438 * 10 8 6 38 38 H 1.08993 * 109.47511 * 275.03488 * 12 11 10 39 39 H 1.09003 * 109.47054 * 35.03866 * 12 11 10 40 40 H 1.09003 * 109.98340 * 298.68050 * 13 12 11 41 41 H 1.08998 * 110.05727 * 177.38080 * 13 12 11 42 42 H 1.08996 * 109.47149 * 177.11992 * 15 14 13 43 43 H 1.08994 * 109.47472 * 297.12972 * 15 14 13 44 44 H 1.09009 * 109.46871 * 57.12565 * 15 14 13 45 45 H 1.09001 * 109.47599 * 302.81921 * 16 14 13 46 46 H 1.09000 * 109.47712 * 62.82736 * 16 14 13 47 47 H 1.09010 * 109.46973 * 182.82536 * 16 14 13 48 48 H 1.08996 * 109.97710 * 284.50647 * 17 14 13 49 49 H 1.08999 * 110.05646 * 163.21483 * 17 14 13 50 50 H 1.09002 * 109.46580 * 324.96182 * 18 11 10 51 51 H 1.08998 * 109.47438 * 84.96338 * 18 11 10 52 52 H 1.07989 * 119.93689 * 180.27722 * 21 19 4 53 53 H 1.08999 * 109.47358 * 239.72756 * 23 22 21 54 54 H 0.96700 * 114.00311 * 300.00591 * 24 23 22 55 55 H 1.08000 * 119.98830 * 180.24831 * 29 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4355 1.2862 0.0005 5 8 4.1792 0.1473 0.0003 6 6 4.5344 -0.3952 -1.2732 7 6 5.8690 0.1998 -1.7268 8 6 4.6636 -1.8926 -1.1630 9 8 4.4710 -2.4411 -0.0986 10 7 4.9933 -2.6222 -2.2472 11 7 5.1109 -3.9794 -2.1470 12 6 6.5011 -4.4008 -2.3325 13 6 6.7262 -5.7505 -1.6276 14 14 5.5051 -6.9633 -2.3733 15 6 5.3328 -8.4549 -1.2705 16 6 6.0751 -7.4860 -4.0682 17 6 3.8644 -6.0626 -2.4967 18 6 4.1682 -4.6553 -3.0411 19 6 4.0602 2.5242 0.0011 20 17 5.7935 2.6220 0.0024 21 6 3.3020 3.6811 -0.0048 22 6 1.9214 3.6061 0.0004 23 6 1.0999 4.8695 0.0003 24 8 0.2760 4.9019 -1.1668 25 14 2.2340 6.3476 0.0011 26 1 1.4244 7.5926 0.0004 27 1 3.0901 6.3140 1.2139 28 1 3.0912 6.3144 -1.2111 29 6 1.2929 2.3750 -0.0002 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3632 -1.0278 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 3.7611 -0.1499 -2.0012 34 1 6.1397 -0.2136 -2.6983 35 1 5.7755 1.2829 -1.8065 36 1 6.6423 -0.0455 -0.9988 37 1 5.1470 -2.1835 -3.0985 38 1 6.7095 -4.5077 -3.3970 39 1 7.1679 -3.6520 -1.9051 40 1 6.5426 -5.6473 -0.5581 41 1 7.7458 -6.0960 -1.7985 42 1 4.5841 -9.1294 -1.6859 43 1 6.2906 -8.9711 -1.2052 44 1 5.0229 -8.1369 -0.2750 45 1 6.1965 -6.6050 -4.6985 46 1 7.0284 -8.0081 -3.9860 47 1 5.3338 -8.1508 -4.5119 48 1 3.4046 -5.9895 -1.5112 49 1 3.1987 -6.5904 -3.1796 50 1 3.2442 -4.0798 -3.0968 51 1 4.6059 -4.7371 -4.0360 52 1 3.7892 4.6448 -0.0089 53 1 0.4707 4.8938 0.8900 54 1 0.7702 4.8828 -1.9978 55 1 0.2143 2.3195 -0.0002 RHF calculation, no. of doubly occupied orbitals= 73 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915442_13428712.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:00:22 Heat of formation + Delta-G solvation = -105.432398 kcal Electronic energy + Delta-G solvation = -36909.656979 eV Core-core repulsion = 32099.020609 eV Total energy + Delta-G solvation = -4810.636370 eV No. of doubly occupied orbitals = 73 Molecular weight (most abundant/longest-lived isotopes) = 416.154 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -42.01690 -41.18417 -39.60920 -39.20797 -38.36030 -37.76535 -36.90797 -34.54754 -32.94682 -32.14559 -31.50780 -31.37212 -29.34536 -28.58118 -28.35330 -28.22592 -26.76753 -25.19179 -23.93811 -23.72604 -22.85929 -22.16243 -21.65045 -19.70701 -19.11657 -18.78443 -18.45548 -17.94166 -17.52378 -17.05538 -16.78818 -16.48155 -16.26684 -16.14131 -16.02314 -15.88565 -15.72562 -15.37182 -15.01113 -14.70754 -14.38936 -14.31277 -14.15970 -13.98357 -13.91405 -13.83350 -13.61376 -13.60003 -13.54531 -13.31273 -13.19485 -13.06355 -12.99899 -12.83707 -12.79346 -12.72430 -12.63612 -12.35106 -12.29466 -12.17144 -11.97179 -11.85911 -11.65634 -11.35977 -10.86060 -10.73693 -10.51519 -10.45704 -10.40096 -10.21953 -9.85489 -9.65513 -9.45118 -0.36826 -0.06294 0.79626 1.12896 1.31514 1.45692 1.52265 1.53041 1.79920 1.91988 1.95038 2.06146 2.09025 2.19778 2.54512 2.67464 3.24191 3.33885 3.55936 3.57089 3.68521 3.76255 3.80289 3.91630 3.99516 4.02958 4.18597 4.26944 4.28013 4.31090 4.31900 4.37444 4.51563 4.58659 4.64052 4.65370 4.66653 4.67367 4.68294 4.80794 4.81162 4.81532 4.84476 4.86470 4.89623 5.00207 5.05954 5.08923 5.21665 5.43202 5.44369 5.58439 5.66165 5.87624 5.93894 6.18734 6.27951 6.44753 6.67670 7.48629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.323 6.323 3 C 0.120 3.880 4 C 0.052 3.948 5 O -0.309 6.309 6 C 0.083 3.917 7 C -0.175 4.175 8 C 0.532 3.468 9 O -0.544 6.544 10 N -0.564 5.564 11 N -0.339 5.339 12 C 0.054 3.946 13 C -0.416 4.416 14 Si 1.064 2.936 15 C -0.463 4.463 16 C -0.448 4.448 17 C -0.413 4.413 18 C 0.054 3.946 19 C -0.016 4.016 20 Cl -0.040 7.040 21 C -0.146 4.146 22 C -0.062 4.062 23 C -0.072 4.072 24 O -0.544 6.544 25 Si 0.965 3.035 26 H -0.268 1.268 27 H -0.257 1.257 28 H -0.245 1.245 29 C -0.159 4.159 30 H 0.077 0.923 31 H 0.111 0.889 32 H 0.070 0.930 33 H 0.107 0.893 34 H 0.101 0.899 35 H 0.085 0.915 36 H 0.060 0.940 37 H 0.399 0.601 38 H 0.068 0.932 39 H 0.066 0.934 40 H 0.063 0.937 41 H 0.094 0.906 42 H 0.072 0.928 43 H 0.071 0.929 44 H 0.059 0.941 45 H 0.072 0.928 46 H 0.072 0.928 47 H 0.074 0.926 48 H 0.065 0.935 49 H 0.097 0.903 50 H 0.070 0.930 51 H 0.069 0.931 52 H 0.149 0.851 53 H 0.137 0.863 54 H 0.392 0.608 55 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.601 1.893 -8.179 8.546 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.236 6.236 3 C 0.073 3.927 4 C 0.007 3.993 5 O -0.225 6.225 6 C 0.023 3.977 7 C -0.233 4.233 8 C 0.318 3.682 9 O -0.418 6.418 10 N -0.311 5.311 11 N -0.158 5.158 12 C -0.073 4.073 13 C -0.501 4.501 14 Si 1.255 2.745 15 C -0.569 4.569 16 C -0.557 4.557 17 C -0.498 4.498 18 C -0.072 4.072 19 C -0.044 4.044 20 Cl -0.011 7.011 21 C -0.164 4.164 22 C -0.063 4.063 23 C -0.183 4.183 24 O -0.352 6.352 25 Si 0.789 3.211 26 H -0.193 1.193 27 H -0.181 1.181 28 H -0.168 1.168 29 C -0.178 4.178 30 H 0.095 0.905 31 H 0.129 0.871 32 H 0.088 0.912 33 H 0.125 0.875 34 H 0.119 0.881 35 H 0.103 0.897 36 H 0.079 0.921 37 H 0.240 0.760 38 H 0.087 0.913 39 H 0.085 0.915 40 H 0.082 0.918 41 H 0.112 0.888 42 H 0.091 0.909 43 H 0.090 0.910 44 H 0.078 0.922 45 H 0.092 0.908 46 H 0.092 0.908 47 H 0.093 0.907 48 H 0.084 0.916 49 H 0.115 0.885 50 H 0.089 0.911 51 H 0.087 0.913 52 H 0.166 0.834 53 H 0.155 0.845 54 H 0.241 0.759 55 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -1.484 1.853 -6.361 6.790 hybrid contribution 0.425 -0.009 -1.076 1.157 sum -1.059 1.844 -7.437 7.735 Atomic orbital electron populations 1.23448 0.75840 1.05622 1.02999 1.86236 1.23778 1.25760 1.87825 1.19393 0.90817 0.86100 0.96398 1.17814 0.87144 0.85468 1.08888 1.86240 1.69902 1.38259 1.28080 1.22223 1.00191 0.89367 0.85912 1.22591 0.94444 1.03419 1.02815 1.20537 0.75835 0.88348 0.83496 1.90714 1.48412 1.73262 1.29364 1.44887 1.72466 1.01826 1.11910 1.61418 1.07756 0.90574 1.56053 1.22281 0.86639 0.98068 1.00264 1.26490 1.12382 1.05834 1.05354 0.78612 0.64957 0.64566 0.66347 1.26255 1.04731 1.15735 1.10202 1.26117 1.06329 1.05997 1.17209 1.26450 1.18026 1.01315 1.03987 1.22281 0.95413 0.95581 0.93945 1.20962 0.86029 0.93237 1.04150 1.98387 1.08173 1.98324 1.96229 1.20946 0.93400 0.97339 1.04741 1.20258 0.92498 0.96344 0.97177 1.24986 1.00525 0.99750 0.93012 1.86512 1.35952 1.96708 1.15982 0.85436 0.77424 0.76391 0.81821 1.19321 1.18150 1.16795 1.21307 1.01807 0.89820 1.04848 0.90482 0.87103 0.91151 0.87491 0.88054 0.89677 0.92075 0.76022 0.91347 0.91549 0.91810 0.88754 0.90884 0.91003 0.92190 0.90836 0.90842 0.90692 0.91623 0.88462 0.91108 0.91290 0.83389 0.84523 0.75874 0.81831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.32 -2.21 10.28 -79.54 -0.82 -3.03 16 3 C 0.12 0.62 6.70 22.57 0.15 0.77 16 4 C 0.05 0.39 5.56 22.58 0.13 0.51 16 5 O -0.31 -3.53 8.55 -67.37 -0.58 -4.10 16 6 C 0.08 0.39 3.20 29.85 0.10 0.49 16 7 C -0.18 0.09 8.29 71.98 0.60 0.69 16 8 C 0.53 5.08 7.34 87.66 0.64 5.73 16 9 O -0.54 -11.50 16.82 16.01 0.27 -11.23 16 10 N -0.56 -1.33 4.53 -173.54 -0.79 -2.11 16 11 N -0.34 -1.27 4.00 -512.67 -2.05 -3.32 16 12 C 0.05 0.03 5.61 86.70 0.49 0.51 16 13 C -0.42 -0.11 5.24 72.29 0.38 0.27 16 14 Si 1.06 -4.17 11.76 68.60 0.81 -3.36 16 15 C -0.46 0.31 8.65 113.37 0.98 1.29 16 16 C -0.45 2.39 8.65 113.37 0.98 3.37 16 17 C -0.41 0.30 5.24 72.29 0.38 0.68 16 18 C 0.05 -0.02 5.61 86.70 0.49 0.47 16 19 C -0.02 -0.07 6.24 22.39 0.14 0.07 16 20 Cl -0.04 -0.16 24.90 -2.72 -0.07 -0.23 16 21 C -0.15 -0.07 8.45 22.30 0.19 0.12 16 22 C -0.06 0.10 5.39 -19.86 -0.11 -0.01 16 23 C -0.07 0.34 2.82 71.23 0.20 0.54 16 24 O -0.54 2.42 12.77 -148.98 -1.90 0.51 16 25 Si 0.97 -3.49 25.06 68.60 1.72 -1.77 16 26 H -0.27 0.08 7.11 99.48 0.71 0.78 16 27 H -0.26 0.41 7.11 99.48 0.71 1.12 16 28 H -0.24 0.98 7.11 99.48 0.71 1.69 16 29 C -0.16 0.04 8.60 22.35 0.19 0.23 16 30 H 0.08 -0.45 7.66 -2.39 -0.02 -0.47 16 31 H 0.11 -0.40 8.14 -2.38 -0.02 -0.42 16 32 H 0.07 -0.30 7.66 -2.39 -0.02 -0.32 16 33 H 0.11 0.04 7.91 -2.39 -0.02 0.02 16 34 H 0.10 -0.71 7.57 -2.39 -0.02 -0.73 16 35 H 0.08 -0.08 5.45 -2.39 -0.01 -0.09 16 36 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 37 H 0.40 -2.15 8.25 -215.50 -1.78 -3.93 16 38 H 0.07 -0.33 7.58 -2.39 -0.02 -0.35 16 39 H 0.07 0.19 8.04 -2.39 -0.02 0.17 16 40 H 0.06 0.35 7.99 -2.39 -0.02 0.33 16 41 H 0.09 -0.24 7.99 -2.39 -0.02 -0.26 16 42 H 0.07 -0.11 7.96 -2.39 -0.02 -0.13 16 43 H 0.07 -0.09 7.96 -2.39 -0.02 -0.11 16 44 H 0.06 0.11 7.96 -2.38 -0.02 0.09 16 45 H 0.07 -0.46 7.96 -2.39 -0.02 -0.48 16 46 H 0.07 -0.38 7.96 -2.39 -0.02 -0.40 16 47 H 0.07 -0.41 7.96 -2.38 -0.02 -0.43 16 48 H 0.06 0.27 7.99 -2.39 -0.02 0.25 16 49 H 0.10 -0.38 8.00 -2.39 -0.02 -0.40 16 50 H 0.07 0.08 8.04 -2.39 -0.02 0.06 16 51 H 0.07 -0.39 7.58 -2.39 -0.02 -0.41 16 52 H 0.15 -0.32 4.87 -2.92 -0.01 -0.33 16 53 H 0.14 -0.95 7.96 -2.39 -0.02 -0.96 16 54 H 0.39 -4.23 8.70 -74.06 -0.64 -4.87 16 55 H 0.16 -0.67 6.30 -2.91 -0.02 -0.69 16 Total: 0.00 -25.81 450.97 2.88 -22.93 By element: Atomic # 1 Polarization: -10.35 SS G_CDS: -0.74 Total: -11.09 kcal Atomic # 6 Polarization: 9.77 SS G_CDS: 7.03 Total: 16.80 kcal Atomic # 7 Polarization: -2.60 SS G_CDS: -2.84 Total: -5.44 kcal Atomic # 8 Polarization: -14.82 SS G_CDS: -3.03 Total: -17.84 kcal Atomic # 14 Polarization: -7.66 SS G_CDS: 2.53 Total: -5.13 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -0.07 Total: -0.23 kcal Total: -25.81 2.88 -22.93 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_13428712.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.506 kcal (2) G-P(sol) polarization free energy of solvation -25.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.315 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.927 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.432 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds