Wall clock time and date at job start Thu Mar 4 2021 13:00:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86296 * 1 3 3 C 1.86303 * 110.01369 * 2 1 4 4 C 1.87570 * 110.03069 * 121.38642 * 2 1 3 5 5 C 1.53931 * 106.83836 * 163.10088 * 4 2 1 6 6 N 1.46444 * 109.45807 * 301.99523 * 5 4 2 7 7 N 1.36605 * 110.99752 * 204.97280 * 6 5 4 8 8 C 1.34768 * 120.00338 * 119.99625 * 7 6 5 9 9 O 1.21657 * 120.00293 * 0.02562 * 8 7 6 10 10 C 1.47043 * 120.00085 * 179.97438 * 8 7 6 11 11 C 1.36227 * 123.49476 * 179.97438 * 10 8 7 12 12 Cl 1.73601 * 124.60397 * 0.03570 * 11 10 8 13 13 S 1.70444 * 110.79087 * 180.02562 * 11 10 8 14 14 C 1.75498 * 92.46699 * 359.97438 * 13 11 10 15 15 C 1.50697 * 124.68626 * 180.02562 * 14 13 11 16 16 O 1.42895 * 109.47590 * 120.02383 * 15 14 13 17 17 Si 1.86300 * 109.47007 * 0.02562 * 15 14 13 18 18 H 1.48503 * 109.46942 * 60.00611 * 17 15 14 19 19 H 1.48503 * 109.47276 * 180.02562 * 17 15 14 20 20 H 1.48494 * 109.47372 * 300.00074 * 17 15 14 21 21 C 1.32692 * 110.62947 * 0.26609 * 14 13 11 22 22 C 1.46438 * 113.64616 * 79.02137 * 6 5 4 23 23 C 1.53933 * 109.45690 * 280.98018 * 22 6 5 24 24 H 1.09007 * 109.46994 * 298.61845 * 1 2 3 25 25 H 1.09005 * 109.46765 * 58.61067 * 1 2 3 26 26 H 1.08997 * 109.47267 * 178.61039 * 1 2 3 27 27 H 1.09004 * 109.47091 * 181.38286 * 3 2 1 28 28 H 1.08996 * 109.47078 * 301.38702 * 3 2 1 29 29 H 1.08994 * 109.46753 * 61.38757 * 3 2 1 30 30 H 1.08998 * 109.97687 * 43.77125 * 4 2 1 31 31 H 1.09000 * 110.05553 * 282.47302 * 4 2 1 32 32 H 1.09001 * 109.47267 * 181.99565 * 5 4 2 33 33 H 1.08997 * 109.47514 * 61.98727 * 5 4 2 34 34 H 0.97006 * 119.99585 * 299.99174 * 7 6 5 35 35 H 1.09001 * 109.46613 * 240.02521 * 15 14 13 36 36 H 0.96705 * 114.00010 * 300.00061 * 16 15 14 37 37 H 1.07994 * 123.45274 * 179.73764 * 21 14 13 38 38 H 1.08997 * 109.47191 * 40.96786 * 22 6 5 39 39 H 1.08987 * 109.47561 * 160.98277 * 22 6 5 40 40 H 1.09000 * 109.97736 * 298.67230 * 23 22 6 41 41 H 1.08995 * 110.05376 * 177.38009 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5006 1.7505 0.0000 4 6 2.5054 -0.9178 1.5044 5 6 3.9826 -1.2501 1.2268 6 7 4.0816 -2.0464 0.0017 7 7 5.2165 -2.8066 0.0025 8 6 5.1283 -4.1494 -0.0717 9 8 4.0379 -4.6846 -0.1397 10 6 6.3501 -4.9676 -0.0714 11 6 6.3439 -6.3280 -0.1431 12 17 4.9114 -7.3033 -0.2458 13 16 7.9335 -6.9424 -0.1184 14 6 8.6335 -5.3367 -0.0099 15 6 10.1110 -5.0480 0.0572 16 8 10.4886 -4.2352 -1.0558 17 14 11.0598 -6.6505 0.0061 18 1 10.7525 -7.3675 -1.2575 19 1 12.5158 -6.3660 0.0728 20 1 10.6675 -7.4952 1.1626 21 6 7.6818 -4.4122 0.0101 22 6 3.9826 -1.2523 -1.2246 23 6 2.5054 -0.9205 -1.5028 24 1 -0.3633 0.4923 0.9022 25 1 -0.3633 0.5353 -0.8773 26 1 -0.3633 -1.0273 -0.0249 27 1 3.5903 1.7403 -0.0248 28 1 2.1220 2.2751 -0.8773 29 1 2.1625 2.2603 0.9021 30 1 1.9380 -1.8369 1.6503 31 1 2.4257 -0.2867 2.3895 32 1 4.3908 -1.8176 2.0631 33 1 4.5465 -0.3253 1.1054 34 1 6.0860 -2.3799 0.0563 35 1 10.3365 -4.5216 0.9846 36 1 10.3161 -4.6417 -1.9161 37 1 7.8819 -3.3532 0.0776 38 1 4.5464 -0.3272 -1.1050 39 1 4.3907 -1.8213 -2.0598 40 1 1.9380 -1.8399 -1.6471 41 1 2.4243 -0.2903 -2.3884 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_13431040.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:00:38 Heat of formation + Delta-G solvation = -38.056557 kcal Electronic energy + Delta-G solvation = -24077.234845 eV Core-core repulsion = 20462.649599 eV Total energy + Delta-G solvation = -3614.585247 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 348.064 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.16307 -39.39074 -38.44513 -37.74537 -36.94586 -34.00717 -32.17659 -31.72078 -29.54337 -28.56737 -28.46997 -26.96599 -25.27037 -23.95577 -22.27654 -22.05092 -20.75155 -19.44359 -18.77582 -18.07898 -17.31936 -16.73849 -16.51463 -16.26912 -16.02956 -15.60623 -15.41766 -14.96377 -14.68044 -14.41663 -14.23852 -14.09834 -14.05962 -13.82597 -13.68751 -13.54722 -13.29784 -13.15173 -13.05898 -13.04199 -12.84242 -12.57424 -12.49959 -12.37669 -12.31529 -11.98925 -11.88402 -10.91182 -10.81591 -10.66868 -10.49643 -10.31077 -10.19405 -9.91470 -9.72735 -9.65536 -0.60795 -0.24834 0.38084 0.69449 0.90169 1.07335 1.23419 1.31889 1.69904 1.70776 1.73590 1.85573 1.91401 2.36776 2.59145 3.11052 3.30866 3.40711 3.78617 3.84810 4.13386 4.24809 4.25974 4.27333 4.31209 4.43891 4.62939 4.64561 4.67250 4.68510 4.69137 4.77626 4.79377 4.85466 4.87225 4.96118 5.37044 5.42304 5.51276 5.55040 5.91296 6.27306 6.32387 6.44883 7.59338 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.995 3.005 3 C -0.448 4.448 4 C -0.398 4.398 5 C 0.056 3.944 6 N -0.311 5.311 7 N -0.574 5.574 8 C 0.591 3.409 9 O -0.489 6.489 10 C -0.155 4.155 11 C -0.110 4.110 12 Cl 0.029 6.971 13 S 0.222 5.778 14 C -0.235 4.235 15 C -0.037 4.037 16 O -0.531 6.531 17 Si 0.884 3.116 18 H -0.230 1.230 19 H -0.221 1.221 20 H -0.229 1.229 21 C -0.069 4.069 22 C 0.056 3.944 23 C -0.398 4.398 24 H 0.068 0.932 25 H 0.068 0.932 26 H 0.071 0.929 27 H 0.065 0.935 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.088 0.912 31 H 0.082 0.918 32 H 0.080 0.920 33 H 0.043 0.957 34 H 0.380 0.620 35 H 0.131 0.869 36 H 0.380 0.620 37 H 0.158 0.842 38 H 0.043 0.957 39 H 0.079 0.921 40 H 0.088 0.912 41 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.321 2.379 0.140 4.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.191 2.809 3 C -0.555 4.555 4 C -0.485 4.485 5 C -0.071 4.071 6 N -0.129 5.129 7 N -0.320 5.320 8 C 0.376 3.624 9 O -0.361 6.361 10 C -0.175 4.175 11 C -0.257 4.257 12 Cl 0.058 6.942 13 S 0.487 5.513 14 C -0.352 4.352 15 C -0.150 4.150 16 O -0.336 6.336 17 Si 0.703 3.297 18 H -0.153 1.153 19 H -0.143 1.143 20 H -0.152 1.152 21 C -0.098 4.098 22 C -0.071 4.071 23 C -0.485 4.485 24 H 0.088 0.912 25 H 0.088 0.912 26 H 0.091 0.909 27 H 0.084 0.916 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.107 0.893 31 H 0.101 0.899 32 H 0.098 0.902 33 H 0.062 0.938 34 H 0.218 0.782 35 H 0.149 0.851 36 H 0.228 0.772 37 H 0.176 0.824 38 H 0.061 0.939 39 H 0.097 0.903 40 H 0.107 0.893 41 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 4.283 -0.257 0.475 4.317 hybrid contribution -0.199 2.225 -0.302 2.255 sum 4.084 1.969 0.173 4.537 Atomic orbital electron populations 1.26030 1.20165 1.04709 1.04362 0.79617 0.67539 0.66357 0.67358 1.26126 1.06053 1.18744 1.04582 1.26246 0.99122 1.08899 1.14208 1.22230 0.97979 0.95608 0.91289 1.61458 1.22410 1.26405 1.02623 1.45000 1.04380 1.05053 1.77522 1.17163 0.87802 0.80496 0.76987 1.90870 1.27754 1.71289 1.46237 1.20179 0.94462 0.91644 1.11202 1.25374 0.96762 0.95655 1.07920 1.98448 1.32942 1.67149 1.95643 1.83459 0.91957 1.06581 1.69351 1.24803 1.01155 0.96202 1.13053 1.24367 0.90127 1.06633 0.93889 1.86547 1.85286 1.45703 1.16109 0.86384 0.83572 0.75799 0.83971 1.15301 1.14315 1.15181 1.21003 0.88726 1.00777 0.99330 1.22245 0.97876 0.95630 0.91382 1.26242 0.99186 1.08894 1.14162 0.91238 0.91244 0.90938 0.91560 0.91114 0.91118 0.89287 0.89888 0.90178 0.93838 0.78164 0.85127 0.77233 0.82433 0.93924 0.90266 0.89273 0.89929 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.33 8.65 101.05 0.87 1.20 16 2 Si 1.00 -1.92 11.76 -169.99 -2.00 -3.92 16 3 C -0.45 0.75 8.65 101.05 0.87 1.62 16 4 C -0.40 0.24 5.24 37.64 0.20 0.43 16 5 C 0.06 -0.01 5.61 -3.59 -0.02 -0.03 16 6 N -0.31 -0.42 4.00 -113.40 -0.45 -0.87 16 7 N -0.57 -0.52 4.61 30.34 0.14 -0.38 16 8 C 0.59 2.04 7.89 -12.69 -0.10 1.94 16 9 O -0.49 -3.52 15.23 5.23 0.08 -3.44 16 10 C -0.15 -0.24 5.98 -104.58 -0.63 -0.87 16 11 C -0.11 -0.23 6.87 30.01 0.21 -0.02 16 12 Cl 0.03 0.11 27.20 -51.86 -1.41 -1.31 16 13 S 0.22 -0.08 20.17 -107.50 -2.17 -2.25 16 14 C -0.23 0.36 5.68 -36.20 -0.21 0.15 16 15 C -0.04 0.10 2.94 36.00 0.11 0.21 16 16 O -0.53 1.18 12.85 -35.23 -0.45 0.73 16 17 Si 0.88 -2.04 26.19 -169.99 -4.45 -6.49 16 18 H -0.23 0.48 7.11 56.52 0.40 0.88 16 19 H -0.22 0.28 7.11 56.52 0.40 0.68 16 20 H -0.23 0.40 7.11 56.52 0.40 0.80 16 21 C -0.07 0.08 9.71 -39.00 -0.38 -0.30 16 22 C 0.06 0.01 5.61 -3.59 -0.02 -0.01 16 23 C -0.40 0.17 5.24 37.64 0.20 0.37 16 24 H 0.07 -0.06 7.96 -51.92 -0.41 -0.47 16 25 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 26 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 28 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.09 0.08 7.99 -51.93 -0.42 -0.33 16 31 H 0.08 -0.14 8.00 -51.93 -0.42 -0.55 16 32 H 0.08 0.03 8.04 -51.93 -0.42 -0.38 16 33 H 0.04 -0.08 7.58 -51.93 -0.39 -0.47 16 34 H 0.38 -0.76 7.37 -185.15 -1.37 -2.12 16 35 H 0.13 -0.52 7.96 -51.93 -0.41 -0.93 16 36 H 0.38 -1.96 8.70 45.56 0.40 -1.56 16 37 H 0.16 -0.54 7.10 -52.49 -0.37 -0.91 16 38 H 0.04 -0.07 7.58 -51.93 -0.39 -0.46 16 39 H 0.08 0.07 8.04 -51.94 -0.42 -0.34 16 40 H 0.09 0.10 7.99 -51.93 -0.42 -0.31 16 41 H 0.08 -0.12 7.99 -51.93 -0.42 -0.53 16 LS Contribution 363.53 15.07 5.48 5.48 Total: 0.00 -6.81 363.53 -10.45 -17.25 By element: Atomic # 1 Polarization: -3.18 SS G_CDS: -6.31 Total: -9.50 kcal Atomic # 6 Polarization: 3.59 SS G_CDS: 1.10 Total: 4.70 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -0.31 Total: -1.25 kcal Atomic # 8 Polarization: -2.34 SS G_CDS: -0.37 Total: -2.71 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: -6.45 Total: -10.42 kcal Atomic # 16 Polarization: -0.08 SS G_CDS: -2.17 Total: -2.25 kcal Atomic # 17 Polarization: 0.11 SS G_CDS: -1.41 Total: -1.31 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -6.81 -10.45 -17.25 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_13431040.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.804 kcal (2) G-P(sol) polarization free energy of solvation -6.805 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.447 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.057 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds