Wall clock time and date at job start Thu Mar 4 2021 13:00:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86300 * 1 3 3 C 1.86295 * 110.01340 * 2 1 4 4 C 1.87575 * 110.03141 * 238.50721 * 2 1 3 5 5 C 1.53928 * 106.83594 * 284.58137 * 4 2 1 6 6 N 1.46446 * 109.45791 * 301.98730 * 5 4 2 7 7 N 1.36596 * 110.99886 * 204.97052 * 6 5 4 8 8 C 1.34771 * 120.00239 * 120.00115 * 7 6 5 9 9 O 1.21290 * 119.99671 * 0.02562 * 8 7 6 10 10 C 1.50696 * 120.00699 * 180.02562 * 8 7 6 11 11 C 1.50702 * 109.47677 * 180.02562 * 10 8 7 12 12 C 1.34846 * 125.89122 * 85.02177 * 11 10 8 13 13 C 1.40889 * 107.41671 * 180.02562 * 12 11 10 14 14 C 1.34847 * 107.41816 * 359.97438 * 13 12 11 15 15 C 1.50699 * 125.89401 * 180.02562 * 14 13 12 16 16 O 1.42900 * 109.47328 * 119.97368 * 15 14 13 17 17 Si 1.86306 * 109.46814 * 359.97438 * 15 14 13 18 18 H 1.48495 * 109.47393 * 60.00107 * 17 15 14 19 19 H 1.48503 * 109.47151 * 180.02562 * 17 15 14 20 20 H 1.48501 * 109.47036 * 299.99967 * 17 15 14 21 21 N 1.36340 * 125.88679 * 264.72201 * 11 10 8 22 22 C 1.46445 * 113.63601 * 79.02548 * 6 5 4 23 23 C 1.53928 * 109.45780 * 280.97380 * 22 6 5 24 24 H 1.08999 * 109.46993 * 298.61701 * 1 2 3 25 25 H 1.08997 * 109.46971 * 58.61524 * 1 2 3 26 26 H 1.08996 * 109.47136 * 178.61946 * 1 2 3 27 27 H 1.09005 * 109.47236 * 181.38398 * 3 2 1 28 28 H 1.08998 * 109.47103 * 301.38383 * 3 2 1 29 29 H 1.09007 * 109.47195 * 61.38581 * 3 2 1 30 30 H 1.09000 * 109.97613 * 165.24855 * 4 2 1 31 31 H 1.09002 * 109.97559 * 43.90759 * 4 2 1 32 32 H 1.09000 * 109.47002 * 181.99571 * 5 4 2 33 33 H 1.08999 * 109.47330 * 61.98893 * 5 4 2 34 34 H 0.97000 * 120.00084 * 300.00322 * 7 6 5 35 35 H 1.09003 * 109.47360 * 300.00166 * 10 8 7 36 36 H 1.09004 * 109.47030 * 59.99996 * 10 8 7 37 37 H 1.07996 * 126.29222 * 0.02562 * 12 11 10 38 38 H 1.08003 * 126.29289 * 180.02562 * 13 12 11 39 39 H 1.09000 * 109.47365 * 239.98118 * 15 14 13 40 40 H 0.96702 * 113.99633 * 179.97438 * 16 15 14 41 41 H 0.97000 * 125.63985 * 359.97438 * 21 11 10 42 42 H 1.08995 * 109.47748 * 40.97568 * 22 6 5 43 43 H 1.09002 * 109.46916 * 160.97966 * 22 6 5 44 44 H 1.09004 * 109.97615 * 177.34358 * 23 22 6 45 45 H 1.08996 * 109.97854 * 298.58653 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5006 1.7504 0.0000 4 6 2.5055 -0.9206 -1.5027 5 6 2.3098 -2.4216 -1.2233 6 7 3.0227 -2.7867 0.0027 7 7 3.3465 -4.1137 0.0039 8 6 4.6377 -4.4922 0.0796 9 8 5.5122 -3.6545 0.1471 10 6 4.9951 -5.9562 0.0804 11 6 6.4916 -6.1080 0.1730 12 6 7.2172 -6.1096 1.3096 13 6 8.5685 -6.2756 0.9470 14 6 8.6171 -6.3697 -0.3973 15 6 9.8623 -6.5559 -1.2255 16 8 9.7611 -7.7706 -1.9712 17 14 11.3476 -6.6375 -0.1038 18 1 11.1995 -7.7815 0.8313 19 1 12.5747 -6.8204 -0.9199 20 1 11.4527 -5.3751 0.6711 21 7 7.3447 -6.2733 -0.8776 22 6 2.3097 -2.4193 1.2280 23 6 2.5055 -0.9177 1.5045 24 1 -0.3633 0.4922 0.9021 25 1 -0.3633 0.5352 -0.8773 26 1 -0.3633 -1.0273 -0.0248 27 1 3.5903 1.7403 -0.0248 28 1 2.1221 2.2750 -0.8773 29 1 2.1625 2.2603 0.9022 30 1 3.5638 -0.7037 -1.6479 31 1 1.9396 -0.6296 -2.3877 32 1 2.7032 -3.0009 -2.0586 33 1 1.2473 -2.6332 -1.1027 34 1 2.6471 -4.7837 -0.0497 35 1 4.5272 -6.4440 0.9356 36 1 4.6391 -6.4176 -0.8407 37 1 6.8331 -6.0032 2.3133 38 1 9.4106 -6.3202 1.6218 39 1 9.9711 -5.7161 -1.9118 40 1 10.5295 -7.9550 -2.5287 41 1 7.0890 -6.3132 -1.8124 42 1 1.2473 -2.6312 1.1077 43 1 2.7031 -2.9971 2.0643 44 1 1.9397 -0.6251 2.3890 45 1 3.5636 -0.7009 1.6510 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:00:46 Heat of formation + Delta-G solvation = -25.367815 kcal Electronic energy + Delta-G solvation = -23831.487656 eV Core-core repulsion = 20395.362791 eV Total energy + Delta-G solvation = -3436.124865 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 311.158 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.17689 -40.80108 -38.46163 -37.63074 -34.13135 -32.96845 -32.19744 -31.76914 -29.92060 -29.24076 -28.48886 -27.85153 -24.90099 -23.97572 -22.31287 -21.73410 -21.18025 -20.88221 -18.83298 -18.47236 -17.91197 -17.75131 -16.73793 -16.15244 -15.92188 -15.62454 -15.20077 -14.91556 -14.80126 -14.37488 -14.28157 -14.21982 -14.03543 -13.87019 -13.70697 -13.61892 -13.50461 -13.31507 -13.22384 -13.16345 -13.05717 -12.87529 -12.79243 -12.44105 -12.33562 -11.92143 -11.80565 -10.93329 -10.76014 -10.52987 -10.43374 -10.32672 -10.18114 -9.66904 -9.60811 -8.78172 1.13316 1.21824 1.52781 1.62062 1.68682 1.73765 1.79763 1.83709 1.89227 2.01426 2.21645 2.54109 2.57751 3.31902 3.41935 3.69987 3.95902 4.01476 4.07594 4.11403 4.24018 4.26133 4.36379 4.37093 4.42939 4.59814 4.63372 4.66288 4.66762 4.67168 4.75893 4.77563 4.82592 4.92434 4.93961 5.34451 5.39986 5.40461 5.45657 5.49328 5.53293 5.90008 6.15858 6.29102 6.36600 6.46674 6.53253 6.77024 7.63253 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.448 4.448 2 Si 0.996 3.004 3 C -0.445 4.445 4 C -0.399 4.399 5 C 0.056 3.944 6 N -0.313 5.313 7 N -0.584 5.584 8 C 0.525 3.475 9 O -0.495 6.495 10 C -0.066 4.066 11 C 0.036 3.964 12 C -0.169 4.169 13 C -0.193 4.193 14 C 0.037 3.963 15 C -0.063 4.063 16 O -0.551 6.551 17 Si 0.973 3.027 18 H -0.246 1.246 19 H -0.259 1.259 20 H -0.248 1.248 21 N -0.533 5.533 22 C 0.056 3.944 23 C -0.398 4.398 24 H 0.070 0.930 25 H 0.070 0.930 26 H 0.065 0.935 27 H 0.071 0.929 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.087 0.913 31 H 0.082 0.918 32 H 0.078 0.922 33 H 0.043 0.957 34 H 0.379 0.621 35 H 0.117 0.883 36 H 0.100 0.900 37 H 0.137 0.863 38 H 0.137 0.863 39 H 0.073 0.927 40 H 0.382 0.618 41 H 0.413 0.587 42 H 0.042 0.958 43 H 0.079 0.921 44 H 0.082 0.918 45 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.448 -1.210 -1.729 4.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.192 2.808 3 C -0.553 4.553 4 C -0.485 4.485 5 C -0.071 4.071 6 N -0.131 5.131 7 N -0.330 5.330 8 C 0.310 3.690 9 O -0.365 6.365 10 C -0.108 4.108 11 C -0.078 4.078 12 C -0.194 4.194 13 C -0.218 4.218 14 C -0.076 4.076 15 C -0.172 4.172 16 O -0.357 6.357 17 Si 0.794 3.206 18 H -0.169 1.169 19 H -0.183 1.183 20 H -0.171 1.171 21 N -0.128 5.128 22 C -0.071 4.071 23 C -0.485 4.485 24 H 0.089 0.911 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.091 0.909 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.106 0.894 31 H 0.101 0.899 32 H 0.096 0.904 33 H 0.061 0.939 34 H 0.217 0.783 35 H 0.136 0.864 36 H 0.118 0.882 37 H 0.155 0.845 38 H 0.154 0.846 39 H 0.091 0.909 40 H 0.229 0.771 41 H 0.249 0.751 42 H 0.060 0.940 43 H 0.097 0.903 44 H 0.100 0.900 45 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -2.275 -0.452 -0.976 2.517 hybrid contribution -1.300 -0.652 -1.101 1.824 sum -3.575 -1.103 -2.077 4.279 Atomic orbital electron populations 1.26128 1.20604 1.04183 1.04594 0.79609 0.66645 0.67240 0.67339 1.26030 1.06628 1.18242 1.04381 1.26244 1.07545 1.00519 1.14228 1.22213 0.95847 0.97663 0.91340 1.61513 1.48511 1.00623 1.02468 1.45297 1.07859 1.01822 1.78018 1.20545 0.81327 0.90714 0.76428 1.90757 1.47026 1.53266 1.45492 1.20071 0.91450 0.93570 1.05753 1.19374 0.90611 1.10268 0.87528 1.20535 0.92697 1.08861 0.97317 1.20583 0.97647 1.10734 0.92879 1.19550 0.84521 1.10408 0.93165 1.24476 1.03134 0.89245 1.00384 1.86491 1.46573 1.40078 1.62576 0.85335 0.74070 0.82253 0.78963 1.16871 1.18266 1.17083 1.41716 1.05747 1.56737 1.08584 1.22240 0.95776 0.97627 0.91483 1.26249 1.07612 1.00505 1.14160 0.91092 0.91125 0.91583 0.90943 0.91254 0.91197 0.89375 0.89945 0.90373 0.93917 0.78253 0.86445 0.88165 0.84502 0.84581 0.90916 0.77083 0.75056 0.94019 0.90268 0.89958 0.89302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.78 8.65 101.05 0.87 1.66 16 2 Si 1.00 -1.99 11.76 -169.99 -2.00 -3.99 16 3 C -0.44 0.35 8.65 101.05 0.87 1.22 16 4 C -0.40 0.28 5.24 37.64 0.20 0.48 16 5 C 0.06 -0.02 5.61 -3.59 -0.02 -0.04 16 6 N -0.31 -0.29 4.00 -113.39 -0.45 -0.74 16 7 N -0.58 0.14 4.63 31.22 0.14 0.29 16 8 C 0.52 1.01 7.93 -10.99 -0.09 0.92 16 9 O -0.50 -3.46 16.36 5.55 0.09 -3.37 16 10 C -0.07 0.07 6.24 -29.04 -0.18 -0.11 16 11 C 0.04 0.09 5.66 -81.79 -0.46 -0.38 16 12 C -0.17 -0.61 10.76 -39.78 -0.43 -1.04 16 13 C -0.19 -0.75 9.37 -39.78 -0.37 -1.13 16 14 C 0.04 0.12 6.54 -81.79 -0.53 -0.41 16 15 C -0.06 -0.05 3.07 36.01 0.11 0.06 16 16 O -0.55 -0.32 12.86 -35.23 -0.45 -0.77 16 17 Si 0.97 0.29 25.87 -169.99 -4.40 -4.10 16 18 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 19 H -0.26 0.01 7.11 56.52 0.40 0.41 16 20 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 21 N -0.53 -1.29 6.08 -5.44 -0.03 -1.33 16 22 C 0.06 -0.01 5.61 -3.59 -0.02 -0.03 16 23 C -0.40 0.19 5.24 37.64 0.20 0.39 16 24 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 25 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 26 H 0.06 -0.12 7.96 -51.93 -0.41 -0.53 16 27 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 28 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 29 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 30 H 0.09 0.08 7.99 -51.93 -0.42 -0.34 16 31 H 0.08 -0.14 7.99 -51.93 -0.42 -0.56 16 32 H 0.08 0.00 8.04 -51.93 -0.42 -0.42 16 33 H 0.04 -0.08 7.58 -51.93 -0.39 -0.48 16 34 H 0.38 -1.31 8.83 -185.16 -1.63 -2.95 16 35 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 36 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 37 H 0.14 0.30 8.06 -52.49 -0.42 -0.12 16 38 H 0.14 0.34 6.22 -52.48 -0.33 0.02 16 39 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 40 H 0.38 -1.50 8.74 45.56 0.40 -1.10 16 41 H 0.41 0.16 8.96 -40.82 -0.37 -0.21 16 42 H 0.04 -0.07 7.58 -51.93 -0.39 -0.47 16 43 H 0.08 0.04 8.04 -51.93 -0.42 -0.38 16 44 H 0.08 -0.12 7.99 -51.93 -0.42 -0.54 16 45 H 0.09 0.11 8.00 -51.93 -0.42 -0.31 16 LS Contribution 367.48 15.07 5.54 5.54 Total: 0.00 -9.73 367.48 -9.59 -19.32 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -8.17 Total: -12.42 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: 0.15 Total: 1.58 kcal Atomic # 7 Polarization: -1.44 SS G_CDS: -0.34 Total: -1.78 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -0.36 Total: -4.14 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -6.40 Total: -8.09 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -9.73 -9.59 -19.32 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.051 kcal (2) G-P(sol) polarization free energy of solvation -9.730 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.317 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds