Wall clock time and date at job start Thu Mar 4 2021 13:00:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86301 * 1 3 3 C 1.86300 * 110.00938 * 2 1 4 4 C 1.87573 * 110.03119 * 238.61413 * 2 1 3 5 5 C 1.54016 * 106.79812 * 197.00987 * 4 2 1 6 6 N 1.46444 * 109.55937 * 57.85278 * 5 4 2 7 7 N 1.36607 * 110.99465 * 155.08536 * 6 5 4 8 8 C 1.34771 * 119.99997 * 251.89094 * 7 6 5 9 9 O 1.21280 * 120.00434 * 5.01337 * 8 7 6 10 10 C 1.50706 * 120.00143 * 185.00982 * 8 7 6 11 11 C 1.53543 * 109.81764 * 80.86637 * 10 8 7 12 12 C 1.53040 * 108.55513 * 180.48971 * 11 10 8 13 13 C 1.50199 * 110.31984 * 310.42744 * 12 11 10 14 14 C 1.50707 * 118.54562 * 200.07789 * 13 12 11 15 15 O 1.42894 * 109.47142 * 69.99997 * 14 13 12 16 16 Si 1.86299 * 109.47015 * 190.00195 * 14 13 12 17 17 H 1.48496 * 109.47136 * 179.97438 * 16 14 13 18 18 H 1.48501 * 109.47073 * 299.99832 * 16 14 13 19 19 H 1.48502 * 109.47567 * 59.99660 * 16 14 13 20 20 C 1.31109 * 122.90809 * 20.05709 * 13 12 11 21 21 N 1.38964 * 121.86881 * 359.65765 * 20 13 12 22 22 C 1.46439 * 113.64558 * 281.03359 * 6 5 4 23 23 C 1.53931 * 109.45560 * 79.02196 * 22 6 5 24 24 H 1.09002 * 109.47317 * 60.00187 * 1 2 3 25 25 H 1.08995 * 109.47480 * 300.00375 * 1 2 3 26 26 H 1.09003 * 109.47411 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.47359 * 59.99647 * 3 2 1 28 28 H 1.08998 * 109.46691 * 179.97438 * 3 2 1 29 29 H 1.09002 * 109.47288 * 299.99578 * 3 2 1 30 30 H 1.08993 * 109.97678 * 316.23126 * 4 2 1 31 31 H 1.09004 * 109.97520 * 77.56632 * 4 2 1 32 32 H 1.09000 * 109.37594 * 297.86055 * 5 4 2 33 33 H 1.08991 * 109.46730 * 177.90735 * 5 4 2 34 34 H 0.96995 * 119.99816 * 71.90355 * 7 6 5 35 35 H 1.08998 * 109.80816 * 320.00128 * 10 8 7 36 36 H 1.08999 * 109.61953 * 300.20747 * 11 10 8 37 37 H 1.08996 * 109.62354 * 60.58810 * 11 10 8 38 38 H 1.09000 * 109.33124 * 70.69404 * 12 11 10 39 39 H 1.09005 * 109.32578 * 190.33747 * 12 11 10 40 40 H 1.08999 * 109.46905 * 309.99370 * 14 13 12 41 41 H 0.96701 * 113.99381 * 179.97438 * 15 14 13 42 42 H 1.08003 * 119.08126 * 179.61651 * 20 13 12 43 43 H 0.97001 * 120.58291 * 193.28849 * 21 20 13 44 44 H 1.09000 * 109.47474 * 319.03148 * 22 6 5 45 45 H 1.09001 * 109.47361 * 199.01619 * 22 6 5 46 46 H 1.09000 * 109.97457 * 182.66288 * 23 22 6 47 47 H 1.08997 * 110.05389 * 61.37084 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5005 1.7505 0.0000 4 6 2.5055 -0.9178 -1.5044 5 6 3.9826 -1.2523 -1.2245 6 7 4.0816 -2.0463 0.0020 7 7 5.2166 -2.8065 0.0027 8 6 5.1337 -4.1415 -0.1623 9 8 4.0627 -4.6576 -0.4019 10 6 6.3719 -4.9931 -0.0491 11 6 6.6882 -5.2578 1.4299 12 6 7.9548 -6.1128 1.5116 13 6 7.8435 -7.2987 0.5965 14 6 8.7363 -8.4870 0.8457 15 8 8.3253 -9.1486 2.0438 16 14 8.6130 -9.6682 -0.5896 17 1 9.4932 -10.8388 -0.3443 18 1 7.2079 -10.1265 -0.7343 19 1 9.0401 -8.9807 -1.8347 20 6 7.0038 -7.3459 -0.4093 21 7 6.1441 -6.2929 -0.6974 22 6 3.9826 -1.2500 1.2269 23 6 2.5054 -0.9177 1.5044 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3634 0.5139 0.8899 26 1 -0.3634 -1.0277 -0.0005 27 1 2.1419 2.2678 0.8900 28 1 3.5904 1.7402 0.0005 29 1 2.1421 2.2678 -0.8900 30 1 1.9381 -1.8368 -1.6503 31 1 2.4258 -0.2853 -2.3886 32 1 4.5465 -0.3272 -1.1048 33 1 4.3908 -1.8213 -2.0597 34 1 6.0822 -2.3854 0.1221 35 1 7.2131 -4.4865 -0.5221 36 1 6.8520 -4.3109 1.9443 37 1 5.8556 -5.7870 1.8933 38 1 8.8157 -5.5113 1.2197 39 1 8.0892 -6.4617 2.5355 40 1 9.7677 -8.1506 0.9518 41 1 8.8569 -9.9251 2.2664 42 1 6.9799 -8.2279 -1.0322 43 1 5.4053 -6.4135 -1.3143 44 1 4.5464 -0.3250 1.1056 45 1 4.3907 -1.8174 2.0633 46 1 2.4257 -0.2852 2.3886 47 1 1.9369 -1.8360 1.6514 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_15413834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:00:55 Heat of formation + Delta-G solvation = -47.330107 kcal Electronic energy + Delta-G solvation = -24790.565914 eV Core-core repulsion = 21326.177214 eV Total energy + Delta-G solvation = -3464.388700 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 313.173 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.43296 -39.88203 -38.40464 -37.24202 -34.30204 -33.22582 -32.88561 -32.22923 -29.58025 -28.68947 -28.50423 -26.89047 -25.27734 -24.03183 -23.57905 -22.22508 -21.67428 -19.36768 -19.08634 -18.41481 -18.13626 -17.43309 -16.79747 -16.46391 -15.93641 -15.61424 -15.25277 -15.21314 -14.88764 -14.45873 -14.39218 -14.19438 -14.08288 -13.96521 -13.89407 -13.73340 -13.59737 -13.33285 -13.26281 -13.18467 -13.10649 -13.04075 -12.90155 -12.42098 -12.36690 -12.05279 -11.65755 -11.56208 -11.22469 -10.94915 -10.75179 -10.54130 -10.40096 -10.29700 -10.09379 -9.69540 -8.39478 1.26424 1.37381 1.44905 1.50030 1.55401 1.61361 1.66629 1.81161 1.86747 1.96831 2.53669 2.59465 3.19940 3.51575 3.65639 3.75582 3.99547 4.02823 4.07556 4.19809 4.22211 4.23641 4.31125 4.41733 4.54640 4.57034 4.60456 4.64644 4.65066 4.67445 4.74300 4.75945 4.78712 4.79921 4.91055 5.07414 5.23688 5.32360 5.34719 5.37294 5.46817 5.51871 5.61919 5.83387 6.19851 6.27606 6.41762 6.76552 6.88215 7.47256 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.996 3.004 3 C -0.448 4.448 4 C -0.399 4.399 5 C 0.055 3.945 6 N -0.313 5.313 7 N -0.577 5.577 8 C 0.528 3.472 9 O -0.503 6.503 10 C 0.141 3.859 11 C -0.125 4.125 12 C -0.053 4.053 13 C -0.236 4.236 14 C -0.055 4.055 15 O -0.548 6.548 16 Si 0.934 3.066 17 H -0.260 1.260 18 H -0.251 1.251 19 H -0.252 1.252 20 C 0.135 3.865 21 N -0.732 5.732 22 C 0.056 3.944 23 C -0.398 4.398 24 H 0.069 0.931 25 H 0.069 0.931 26 H 0.071 0.929 27 H 0.070 0.930 28 H 0.065 0.935 29 H 0.070 0.930 30 H 0.088 0.912 31 H 0.082 0.918 32 H 0.042 0.958 33 H 0.078 0.922 34 H 0.382 0.618 35 H 0.090 0.910 36 H 0.078 0.922 37 H 0.078 0.922 38 H 0.066 0.934 39 H 0.080 0.920 40 H 0.065 0.935 41 H 0.374 0.626 42 H 0.127 0.873 43 H 0.410 0.590 44 H 0.045 0.955 45 H 0.081 0.919 46 H 0.083 0.917 47 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.710 3.627 0.081 5.189 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.192 2.808 3 C -0.555 4.555 4 C -0.485 4.485 5 C -0.072 4.072 6 N -0.131 5.131 7 N -0.322 5.322 8 C 0.312 3.688 9 O -0.374 6.374 10 C 0.030 3.970 11 C -0.164 4.164 12 C -0.090 4.090 13 C -0.246 4.246 14 C -0.167 4.167 15 O -0.353 6.353 16 Si 0.758 3.242 17 H -0.184 1.184 18 H -0.175 1.175 19 H -0.176 1.176 20 C 0.014 3.986 21 N -0.365 5.365 22 C -0.071 4.071 23 C -0.485 4.485 24 H 0.088 0.912 25 H 0.088 0.912 26 H 0.091 0.909 27 H 0.089 0.911 28 H 0.084 0.916 29 H 0.089 0.911 30 H 0.107 0.893 31 H 0.101 0.899 32 H 0.060 0.940 33 H 0.096 0.904 34 H 0.220 0.780 35 H 0.108 0.892 36 H 0.096 0.904 37 H 0.097 0.903 38 H 0.084 0.916 39 H 0.099 0.901 40 H 0.083 0.917 41 H 0.220 0.780 42 H 0.144 0.856 43 H 0.247 0.753 44 H 0.063 0.937 45 H 0.099 0.901 46 H 0.102 0.898 47 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 2.103 2.952 -0.740 3.699 hybrid contribution 1.261 0.621 0.139 1.412 sum 3.364 3.573 -0.602 4.944 Atomic orbital electron populations 1.26032 1.20151 1.04715 1.04403 0.79605 0.67557 0.66357 0.67268 1.26130 1.06036 1.18743 1.04620 1.26262 0.99208 1.08846 1.14229 1.22263 0.97875 0.95627 0.91411 1.61553 1.22349 1.26536 1.02682 1.45170 1.04886 1.05944 1.76234 1.20509 0.90711 0.81067 0.76463 1.90726 1.29666 1.71954 1.45032 1.20935 0.94673 0.85412 0.95982 1.21850 1.00132 1.01228 0.93185 1.19963 0.96070 0.93370 0.99585 1.19889 1.06392 0.98198 1.00137 1.24407 0.98959 0.97402 0.95956 1.86534 1.60086 1.45866 1.42830 0.85970 0.81044 0.79118 0.78029 1.18403 1.17505 1.17591 1.20332 0.91258 0.90885 0.96095 1.44204 1.33379 1.08118 1.50810 1.22225 0.98074 0.95671 0.91161 1.26242 0.99056 1.08899 1.14327 0.91217 0.91211 0.90950 0.91090 0.91573 0.91095 0.89317 0.89921 0.93957 0.90393 0.77953 0.89222 0.90371 0.90289 0.91602 0.90119 0.91707 0.77965 0.85573 0.75308 0.93719 0.90072 0.89786 0.89330 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.44 8.65 101.05 0.87 1.32 16 2 Si 1.00 -2.27 11.76 -169.99 -2.00 -4.27 16 3 C -0.45 0.88 8.65 101.05 0.87 1.76 16 4 C -0.40 0.29 5.25 37.69 0.20 0.48 16 5 C 0.06 -0.02 5.61 -3.54 -0.02 -0.04 16 6 N -0.31 -0.18 4.01 -113.35 -0.45 -0.63 16 7 N -0.58 0.22 4.63 31.22 0.14 0.36 16 8 C 0.53 0.96 7.19 -10.99 -0.08 0.89 16 9 O -0.50 -3.09 16.41 5.56 0.09 -3.00 16 10 C 0.14 0.00 3.36 -68.51 -0.23 -0.23 16 11 C -0.13 0.02 5.47 -26.43 -0.14 -0.13 16 12 C -0.05 -0.01 5.85 -28.10 -0.16 -0.18 16 13 C -0.24 -0.33 5.40 -101.33 -0.55 -0.88 16 14 C -0.06 -0.01 2.80 36.01 0.10 0.09 16 15 O -0.55 -0.58 12.86 -35.23 -0.45 -1.04 16 16 Si 0.93 0.01 25.20 -169.99 -4.28 -4.28 16 17 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 18 H -0.25 -0.36 6.88 56.52 0.39 0.02 16 19 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 20 C 0.13 0.21 9.62 -16.06 -0.15 0.05 16 21 N -0.73 -1.03 5.47 -55.33 -0.30 -1.33 16 22 C 0.06 -0.05 5.60 -3.59 -0.02 -0.07 16 23 C -0.40 0.45 5.24 37.64 0.20 0.65 16 24 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 25 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 26 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 27 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 28 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 29 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 30 H 0.09 0.08 7.99 -51.93 -0.42 -0.33 16 31 H 0.08 -0.14 7.99 -51.93 -0.42 -0.55 16 32 H 0.04 -0.08 7.58 -51.93 -0.39 -0.47 16 33 H 0.08 0.04 8.04 -51.93 -0.42 -0.37 16 34 H 0.38 -1.29 8.83 -185.15 -1.63 -2.93 16 35 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 38 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 40 H 0.06 -0.08 7.96 -51.93 -0.41 -0.50 16 41 H 0.37 -1.18 8.74 45.56 0.40 -0.78 16 42 H 0.13 0.08 4.33 -52.48 -0.23 -0.15 16 43 H 0.41 0.66 8.10 -40.82 -0.33 0.32 16 44 H 0.04 -0.11 7.58 -51.93 -0.39 -0.50 16 45 H 0.08 -0.05 8.04 -51.93 -0.42 -0.47 16 46 H 0.08 -0.18 7.99 -51.93 -0.42 -0.60 16 47 H 0.09 0.03 7.99 -51.93 -0.42 -0.38 16 LS Contribution 369.78 15.07 5.57 5.57 Total: 0.00 -7.69 369.78 -9.69 -17.38 By element: Atomic # 1 Polarization: -3.58 SS G_CDS: -8.89 Total: -12.47 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: 0.88 Total: 3.71 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: -0.61 Total: -1.61 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.36 Total: -4.04 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: -6.28 Total: -8.55 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -7.69 -9.69 -17.38 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_15413834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.948 kcal (2) G-P(sol) polarization free energy of solvation -7.690 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.638 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.330 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds