Wall clock time and date at job start Thu Mar 4 2021 13:01:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86294 * 110.01092 * 2 1 4 4 C 1.87569 * 110.02858 * 238.61290 * 2 1 3 5 5 C 1.54023 * 106.79798 * 197.00872 * 4 2 1 6 6 N 1.46441 * 109.55784 * 57.85734 * 5 4 2 7 7 N 1.36602 * 110.99479 * 155.08764 * 6 5 4 8 8 C 1.34773 * 119.99863 * 247.40031 * 7 6 5 9 9 O 1.21279 * 119.99943 * 0.02562 * 8 7 6 10 10 C 1.50701 * 119.99879 * 180.02562 * 8 7 6 11 11 C 1.53033 * 109.33082 * 234.00638 * 10 8 7 12 12 C 1.53567 * 108.55168 * 190.16105 * 11 10 8 13 13 N 1.47026 * 107.64792 * 60.97573 * 12 11 10 14 14 C 1.38925 * 118.88222 * 316.32772 * 13 12 11 15 15 C 1.31121 * 121.84807 * 13.29147 * 14 13 12 16 16 C 1.50700 * 118.54296 * 179.61924 * 15 14 13 17 17 O 1.42899 * 109.47270 * 296.99655 * 16 15 14 18 18 Si 1.86298 * 109.47353 * 57.00385 * 16 15 14 19 19 H 1.48490 * 109.47391 * 59.99329 * 18 16 15 20 20 H 1.48506 * 109.47180 * 179.97438 * 18 16 15 21 21 H 1.48506 * 109.46618 * 299.99564 * 18 16 15 22 22 C 1.46442 * 113.64059 * 281.03479 * 6 5 4 23 23 C 1.53920 * 109.46159 * 79.02370 * 22 6 5 24 24 H 1.09000 * 109.47149 * 60.00171 * 1 2 3 25 25 H 1.09002 * 109.47224 * 299.99921 * 1 2 3 26 26 H 1.09000 * 109.47155 * 180.02562 * 1 2 3 27 27 H 1.08999 * 109.47081 * 59.99844 * 3 2 1 28 28 H 1.08991 * 109.47395 * 179.97438 * 3 2 1 29 29 H 1.09001 * 109.47263 * 300.00533 * 3 2 1 30 30 H 1.08996 * 109.98202 * 316.22737 * 4 2 1 31 31 H 1.09003 * 109.97412 * 77.56817 * 4 2 1 32 32 H 1.09001 * 109.37439 * 297.86022 * 5 4 2 33 33 H 1.08988 * 109.46723 * 177.91439 * 5 4 2 34 34 H 0.96996 * 119.99838 * 67.40848 * 7 6 5 35 35 H 1.08999 * 109.33012 * 353.49512 * 10 8 7 36 36 H 1.09006 * 109.62630 * 309.89337 * 11 10 8 37 37 H 1.09002 * 109.62468 * 70.44971 * 11 10 8 38 38 H 1.09001 * 109.83718 * 301.42971 * 12 11 10 39 39 H 1.09002 * 109.81504 * 180.50736 * 12 11 10 40 40 H 0.96994 * 120.56354 * 136.34551 * 13 12 11 41 41 H 1.08002 * 119.07878 * 193.31655 * 14 13 12 42 42 H 1.09004 * 109.46657 * 176.99943 * 16 15 14 43 43 H 0.96694 * 114.00367 * 294.39191 * 17 16 15 44 44 H 1.08997 * 109.47673 * 319.02266 * 22 6 5 45 45 H 1.09012 * 109.47119 * 199.01891 * 22 6 5 46 46 H 1.09002 * 109.98133 * 182.65831 * 23 22 6 47 47 H 1.09005 * 110.05417 * 61.36596 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5005 1.7505 0.0000 4 6 2.5054 -0.9178 -1.5044 5 6 3.9826 -1.2523 -1.2245 6 7 4.0816 -2.0464 0.0019 7 7 5.2166 -2.8065 0.0026 8 6 5.1284 -4.1493 -0.0715 9 8 4.0414 -4.6828 -0.1392 10 6 6.3806 -4.9878 -0.0702 11 6 6.3727 -5.9119 -1.2900 12 6 7.5138 -6.9287 -1.1401 13 7 7.2600 -7.7066 0.0814 14 6 6.8492 -7.0394 1.2287 15 6 6.4370 -5.7951 1.1952 16 6 6.0000 -5.1465 2.4834 17 8 4.8608 -5.8362 3.0016 18 14 7.3901 -5.2254 3.7213 19 1 8.5738 -4.5087 3.1827 20 1 6.9596 -4.5857 4.9904 21 1 7.7448 -6.6446 3.9771 22 6 3.9825 -1.2500 1.2268 23 6 2.5055 -0.9177 1.5044 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 2.1420 2.2677 0.8900 28 1 3.5904 1.7403 0.0005 29 1 2.1420 2.2678 -0.8899 30 1 1.9381 -1.8369 -1.6503 31 1 2.4258 -0.2853 -2.3885 32 1 4.5465 -0.3272 -1.1049 33 1 4.3908 -1.8212 -2.0597 34 1 6.0860 -2.3798 0.0565 35 1 7.2520 -4.3351 -0.1208 36 1 5.4191 -6.4371 -1.3453 37 1 6.5230 -5.3241 -2.1956 38 1 8.4663 -6.4057 -1.0541 39 1 7.5327 -7.5930 -2.0041 40 1 7.3777 -8.6693 0.0864 41 1 6.8703 -7.5600 2.1747 42 1 5.7396 -4.1048 2.2955 43 1 4.0714 -5.7631 2.4481 44 1 4.5465 -0.3251 1.1055 45 1 4.3908 -1.8175 2.0632 46 1 2.4258 -0.2853 2.3886 47 1 1.9370 -1.8361 1.6514 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_15608500.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:01:04 Heat of formation + Delta-G solvation = -56.342603 kcal Electronic energy + Delta-G solvation = -25771.792642 eV Core-core repulsion = 22307.013131 eV Total energy + Delta-G solvation = -3464.779511 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 313.173 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.43203 -39.80663 -38.08546 -37.25450 -34.16108 -33.24417 -32.53508 -32.17189 -29.50285 -28.50239 -28.47503 -26.83871 -25.69230 -23.95492 -23.16384 -22.20101 -21.58553 -19.33213 -18.86498 -18.17055 -18.04176 -17.75249 -16.63683 -16.18779 -15.94396 -15.66450 -15.28503 -14.91996 -14.61097 -14.44125 -14.35591 -14.21067 -14.11428 -13.99698 -13.80476 -13.66919 -13.54801 -13.30507 -13.25793 -13.14380 -13.06859 -12.86118 -12.53838 -12.31567 -12.24554 -12.02375 -12.01033 -11.43139 -10.91669 -10.89459 -10.73022 -10.61874 -10.42629 -10.30652 -10.13786 -9.63827 -8.38939 1.24472 1.41730 1.62518 1.67138 1.70642 1.78420 1.85217 1.88032 1.91927 2.14483 2.58770 2.60010 3.33163 3.61077 3.83722 3.90601 4.11621 4.13162 4.15020 4.26425 4.27802 4.29698 4.36628 4.43978 4.48961 4.54330 4.63360 4.66092 4.67961 4.69146 4.69269 4.73868 4.77286 4.78868 4.85463 4.95942 5.21389 5.26829 5.36508 5.41572 5.50418 5.52351 5.54574 5.92481 6.37166 6.42932 6.51181 6.83907 6.87632 7.67988 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.995 3.005 3 C -0.448 4.448 4 C -0.398 4.398 5 C 0.056 3.944 6 N -0.313 5.313 7 N -0.584 5.584 8 C 0.540 3.460 9 O -0.507 6.507 10 C -0.034 4.034 11 C -0.126 4.126 12 C 0.122 3.878 13 N -0.751 5.751 14 C 0.167 3.833 15 C -0.287 4.287 16 C -0.067 4.067 17 O -0.547 6.547 18 Si 1.013 2.987 19 H -0.254 1.254 20 H -0.261 1.261 21 H -0.255 1.255 22 C 0.055 3.945 23 C -0.398 4.398 24 H 0.068 0.932 25 H 0.068 0.932 26 H 0.071 0.929 27 H 0.070 0.930 28 H 0.065 0.935 29 H 0.069 0.931 30 H 0.088 0.912 31 H 0.081 0.919 32 H 0.041 0.959 33 H 0.077 0.923 34 H 0.379 0.621 35 H 0.083 0.917 36 H 0.084 0.916 37 H 0.076 0.924 38 H 0.062 0.938 39 H 0.082 0.918 40 H 0.403 0.597 41 H 0.138 0.862 42 H 0.057 0.943 43 H 0.371 0.629 44 H 0.042 0.958 45 H 0.080 0.920 46 H 0.082 0.918 47 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.811 2.178 -2.038 4.839 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.191 2.809 3 C -0.555 4.555 4 C -0.485 4.485 5 C -0.071 4.071 6 N -0.131 5.131 7 N -0.330 5.330 8 C 0.326 3.674 9 O -0.378 6.378 10 C -0.057 4.057 11 C -0.165 4.165 12 C -0.003 4.003 13 N -0.381 5.381 14 C 0.045 3.955 15 C -0.298 4.298 16 C -0.176 4.176 17 O -0.353 6.353 18 Si 0.833 3.167 19 H -0.178 1.178 20 H -0.185 1.185 21 H -0.179 1.179 22 C -0.072 4.072 23 C -0.485 4.485 24 H 0.087 0.913 25 H 0.088 0.912 26 H 0.091 0.909 27 H 0.089 0.911 28 H 0.084 0.916 29 H 0.089 0.911 30 H 0.106 0.894 31 H 0.100 0.900 32 H 0.059 0.941 33 H 0.096 0.904 34 H 0.217 0.783 35 H 0.101 0.899 36 H 0.103 0.897 37 H 0.095 0.905 38 H 0.080 0.920 39 H 0.101 0.899 40 H 0.237 0.763 41 H 0.155 0.845 42 H 0.076 0.924 43 H 0.219 0.781 44 H 0.061 0.939 45 H 0.098 0.902 46 H 0.101 0.899 47 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 3.773 1.379 -1.140 4.176 hybrid contribution 0.286 0.812 -0.914 1.256 sum 4.059 2.191 -2.054 5.050 Atomic orbital electron populations 1.26031 1.20172 1.04706 1.04361 0.79618 0.67529 0.66351 0.67395 1.26129 1.06035 1.18786 1.04575 1.26255 0.99296 1.08794 1.14156 1.22241 0.97763 0.95615 0.91508 1.61523 1.22799 1.26370 1.02403 1.45528 1.04146 1.05607 1.77669 1.20504 0.91251 0.80436 0.75202 1.90682 1.29169 1.71382 1.46575 1.19656 0.95229 0.95875 0.94927 1.21825 1.00862 0.97603 0.96194 1.21575 0.97144 0.94144 0.87392 1.44608 1.75051 1.09167 1.09298 1.20447 0.92134 0.92639 0.90287 1.20318 1.17168 0.97498 0.94824 1.24956 0.96506 0.96406 0.99760 1.86622 1.21325 1.75982 1.51373 0.84565 0.74606 0.80948 0.76586 1.17789 1.18498 1.17879 1.22231 0.97904 0.95647 0.91419 1.26235 0.99187 1.08863 1.14176 0.91256 0.91233 0.90940 0.91114 0.91585 0.91137 0.89357 0.90006 0.94070 0.90422 0.78334 0.89903 0.89723 0.90503 0.91983 0.89937 0.76271 0.84472 0.92436 0.78077 0.93939 0.90201 0.89920 0.89295 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.34 8.65 101.05 0.87 1.21 16 2 Si 1.00 -1.94 11.76 -169.99 -2.00 -3.94 16 3 C -0.45 0.73 8.65 101.05 0.87 1.61 16 4 C -0.40 0.21 5.25 37.69 0.20 0.41 16 5 C 0.06 -0.01 5.61 -3.54 -0.02 -0.03 16 6 N -0.31 -0.30 4.00 -113.35 -0.45 -0.75 16 7 N -0.58 -0.16 4.59 31.22 0.14 -0.02 16 8 C 0.54 1.19 5.14 -10.99 -0.06 1.13 16 9 O -0.51 -3.18 16.87 5.56 0.09 -3.09 16 10 C -0.03 -0.01 2.71 -93.15 -0.25 -0.26 16 11 C -0.13 0.05 5.43 -26.42 -0.14 -0.10 16 12 C 0.12 -0.23 7.16 -3.46 -0.02 -0.25 16 13 N -0.75 0.70 5.83 -60.67 -0.35 0.35 16 14 C 0.17 0.10 9.48 -16.08 -0.15 -0.05 16 15 C -0.29 -0.30 4.34 -101.34 -0.44 -0.74 16 16 C -0.07 -0.10 2.30 36.01 0.08 -0.01 16 17 O -0.55 -1.69 12.50 -35.23 -0.44 -2.14 16 18 Si 1.01 0.99 27.17 -169.99 -4.62 -3.63 16 19 H -0.25 -0.13 7.11 56.52 0.40 0.28 16 20 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 21 H -0.26 -0.38 6.80 56.52 0.38 0.01 16 22 C 0.06 -0.01 5.61 -3.59 -0.02 -0.03 16 23 C -0.40 0.25 5.24 37.64 0.20 0.45 16 24 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 25 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 26 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H 0.06 -0.11 7.96 -51.93 -0.41 -0.52 16 29 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 30 H 0.09 0.09 7.99 -51.93 -0.42 -0.32 16 31 H 0.08 -0.12 7.99 -51.93 -0.42 -0.54 16 32 H 0.04 -0.07 7.58 -51.93 -0.39 -0.46 16 33 H 0.08 0.04 8.04 -51.94 -0.42 -0.38 16 34 H 0.38 -0.92 8.67 -185.16 -1.61 -2.52 16 35 H 0.08 -0.16 7.92 -51.93 -0.41 -0.57 16 36 H 0.08 0.18 7.73 -51.93 -0.40 -0.22 16 37 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 38 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 40 H 0.40 -1.05 8.96 -40.82 -0.37 -1.42 16 41 H 0.14 0.03 6.79 -52.49 -0.36 -0.32 16 42 H 0.06 0.06 6.69 -51.93 -0.35 -0.29 16 43 H 0.37 0.99 9.11 45.56 0.42 1.41 16 44 H 0.04 -0.07 7.58 -51.93 -0.39 -0.47 16 45 H 0.08 0.02 8.04 -51.92 -0.42 -0.40 16 46 H 0.08 -0.13 7.99 -51.93 -0.42 -0.55 16 47 H 0.09 0.07 7.99 -51.93 -0.42 -0.34 16 LS Contribution 370.60 15.07 5.58 5.58 Total: 0.00 -6.52 370.60 -9.84 -16.36 By element: Atomic # 1 Polarization: -3.14 SS G_CDS: -8.92 Total: -12.06 kcal Atomic # 6 Polarization: 2.22 SS G_CDS: 1.12 Total: 3.33 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.66 Total: -0.42 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -0.35 Total: -5.22 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -6.62 Total: -7.57 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -6.52 -9.84 -16.36 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_15608500.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.983 kcal (2) G-P(sol) polarization free energy of solvation -6.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.500 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.360 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds