Wall clock time and date at job start Thu Mar 4 2021 13:01:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86299 * 110.01025 * 2 1 4 4 C 1.87572 * 110.03343 * 121.38679 * 2 1 3 5 5 C 1.53919 * 106.83721 * 163.10164 * 4 2 1 6 6 N 1.46444 * 109.46397 * 301.99170 * 5 4 2 7 7 N 1.36599 * 111.00410 * 204.97044 * 6 5 4 8 8 C 1.34777 * 120.00346 * 119.99639 * 7 6 5 9 9 O 1.21287 * 119.99551 * 0.02562 * 8 7 6 10 10 C 1.50697 * 120.00269 * 179.97438 * 8 7 6 11 11 O 1.42900 * 109.46989 * 180.02562 * 10 8 7 12 12 C 1.35896 * 116.99818 * 180.02562 * 11 10 8 13 13 C 1.38711 * 120.05694 * 0.02562 * 12 11 10 14 14 C 1.38169 * 119.94549 * 179.97438 * 13 12 11 15 15 C 1.38242 * 120.05457 * 359.97438 * 14 13 12 16 16 C 1.38295 * 120.11401 * 359.97438 * 15 14 13 17 17 C 1.38122 * 120.05026 * 0.02562 * 16 15 14 18 18 C 1.50707 * 120.02333 * 179.97438 * 17 16 15 19 19 O 1.42896 * 109.47019 * 105.00041 * 18 17 16 20 20 Si 1.86298 * 109.47215 * 344.99806 * 18 17 16 21 21 H 1.48506 * 109.46978 * 60.00192 * 20 18 17 22 22 H 1.48497 * 109.47242 * 179.97438 * 20 18 17 23 23 H 1.48503 * 109.47210 * 300.00371 * 20 18 17 24 24 C 1.46441 * 113.63907 * 79.01983 * 6 5 4 25 25 C 1.53932 * 109.45898 * 280.98380 * 24 6 5 26 26 H 1.08993 * 109.46913 * 298.61097 * 1 2 3 27 27 H 1.08995 * 109.47112 * 58.61332 * 1 2 3 28 28 H 1.09003 * 109.46655 * 178.61368 * 1 2 3 29 29 H 1.09000 * 109.47152 * 181.38460 * 3 2 1 30 30 H 1.08999 * 109.47382 * 301.38392 * 3 2 1 31 31 H 1.08999 * 109.47042 * 61.39140 * 3 2 1 32 32 H 1.09000 * 109.97433 * 43.76962 * 4 2 1 33 33 H 1.09000 * 110.05471 * 282.47956 * 4 2 1 34 34 H 1.09004 * 109.47512 * 181.99387 * 5 4 2 35 35 H 1.09003 * 109.47713 * 61.99152 * 5 4 2 36 36 H 0.97006 * 119.99900 * 300.00274 * 7 6 5 37 37 H 1.08999 * 109.46926 * 60.00562 * 10 8 7 38 38 H 1.08998 * 109.46872 * 300.00249 * 10 8 7 39 39 H 1.07998 * 120.02756 * 359.95116 * 13 12 11 40 40 H 1.07998 * 119.97385 * 179.97438 * 14 13 12 41 41 H 1.07997 * 119.94707 * 180.02562 * 15 14 13 42 42 H 1.07997 * 119.97026 * 179.74858 * 16 15 14 43 43 H 1.09003 * 109.46978 * 224.99971 * 18 17 16 44 44 H 0.96700 * 114.00139 * 299.99525 * 19 18 17 45 45 H 1.09000 * 109.47389 * 40.97450 * 24 6 5 46 46 H 1.09000 * 109.47322 * 160.98790 * 24 6 5 47 47 H 1.09003 * 109.97463 * 298.67334 * 25 24 6 48 48 H 1.09000 * 110.05221 * 177.38094 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5005 1.7505 0.0000 4 6 2.5056 -0.9178 1.5044 5 6 3.9826 -1.2500 1.2267 6 7 4.0817 -2.0464 0.0017 7 7 5.2167 -2.8065 0.0023 8 6 5.1286 -4.1493 -0.0718 9 8 4.0415 -4.6828 -0.1395 10 6 6.3808 -4.9878 -0.0717 11 8 6.0285 -6.3700 -0.1579 12 6 7.0491 -7.2672 -0.1686 13 6 8.3624 -6.8265 -0.0972 14 6 9.3982 -7.7408 -0.1077 15 6 9.1266 -9.0939 -0.1889 16 6 7.8181 -9.5359 -0.2592 17 6 6.7791 -8.6259 -0.2490 18 6 5.3534 -9.1082 -0.3262 19 8 4.7434 -8.9993 0.9614 20 14 5.3289 -10.8879 -0.8765 21 1 6.0802 -11.7181 0.0991 22 1 3.9241 -11.3634 -0.9519 23 1 5.9629 -11.0011 -2.2145 24 6 3.9826 -1.2522 -1.2246 25 6 2.5055 -0.9204 -1.5028 26 1 -0.3633 0.4921 0.9021 27 1 -0.3633 0.5352 -0.8772 28 1 -0.3633 -1.0274 -0.0249 29 1 3.5902 1.7404 -0.0248 30 1 2.1220 2.2751 -0.8773 31 1 2.1625 2.2603 0.9022 32 1 1.9381 -1.8369 1.6502 33 1 2.4258 -0.2867 2.3895 34 1 4.3909 -1.8175 2.0630 35 1 4.5466 -0.3251 1.1054 36 1 6.0862 -2.3797 0.0562 37 1 6.9364 -4.8108 0.8492 38 1 6.9995 -4.7168 -0.9272 39 1 8.5751 -5.7696 -0.0337 40 1 10.4209 -7.3982 -0.0525 41 1 9.9376 -9.8070 -0.1967 42 1 7.6087 -10.5932 -0.3267 43 1 4.8020 -8.4989 -1.0422 44 1 5.1828 -9.5169 1.6499 45 1 4.5464 -0.3271 -1.1050 46 1 4.3908 -1.8212 -2.0600 47 1 1.9381 -1.8399 -1.6471 48 1 2.4243 -0.2902 -2.3884 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_2989392.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:01:25 Heat of formation + Delta-G solvation = -70.552718 kcal Electronic energy + Delta-G solvation = -27364.499355 eV Core-core repulsion = 23544.932704 eV Total energy + Delta-G solvation = -3819.566651 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 338.162 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.58911 -40.81203 -38.97961 -37.96160 -37.34193 -34.18533 -32.72184 -32.21478 -31.35156 -30.11908 -29.20703 -28.48522 -27.55613 -26.58491 -23.99831 -23.65850 -22.59148 -22.16933 -21.58316 -19.48722 -18.91837 -17.92833 -17.78239 -17.47052 -16.96267 -16.65113 -16.47228 -15.94991 -15.82371 -15.63493 -15.05169 -14.98483 -14.86227 -14.50449 -14.32791 -14.08159 -13.90108 -13.74198 -13.71118 -13.60881 -13.46761 -13.30977 -13.16781 -13.08093 -13.00681 -12.88044 -12.53739 -12.35067 -12.18592 -12.01541 -11.81461 -11.52388 -10.93399 -10.77340 -10.53222 -10.36065 -10.25916 -10.20652 -9.99611 -9.72207 -9.20293 0.20829 0.40495 1.19419 1.25867 1.48435 1.60886 1.64318 1.68637 1.83236 1.88676 2.00696 2.35926 2.57603 2.68114 3.23307 3.49184 3.61195 3.78163 3.78815 3.88185 3.92403 4.02157 4.08928 4.22002 4.22846 4.26000 4.31791 4.33726 4.51438 4.59713 4.61158 4.65934 4.66538 4.72639 4.76811 4.78869 4.81151 4.92862 4.99362 5.25928 5.31105 5.34817 5.40107 5.47427 5.48856 5.54549 5.67628 5.85791 6.19424 6.27458 6.43880 6.77271 7.50577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.996 3.004 3 C -0.448 4.448 4 C -0.399 4.399 5 C 0.056 3.944 6 N -0.311 5.311 7 N -0.579 5.579 8 C 0.529 3.471 9 O -0.479 6.479 10 C 0.044 3.956 11 O -0.275 6.275 12 C 0.155 3.845 13 C -0.212 4.212 14 C -0.073 4.073 15 C -0.151 4.151 16 C -0.089 4.089 17 C -0.148 4.148 18 C -0.071 4.071 19 O -0.529 6.529 20 Si 0.950 3.050 21 H -0.253 1.253 22 H -0.252 1.252 23 H -0.250 1.250 24 C 0.056 3.944 25 C -0.399 4.399 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.072 0.928 29 H 0.065 0.935 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.080 0.920 35 H 0.044 0.956 36 H 0.380 0.620 37 H 0.094 0.906 38 H 0.094 0.906 39 H 0.130 0.870 40 H 0.128 0.872 41 H 0.128 0.872 42 H 0.130 0.870 43 H 0.118 0.882 44 H 0.370 0.630 45 H 0.043 0.957 46 H 0.079 0.921 47 H 0.089 0.911 48 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.432 3.575 0.174 6.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.192 2.808 3 C -0.555 4.555 4 C -0.486 4.486 5 C -0.071 4.071 6 N -0.129 5.129 7 N -0.326 5.326 8 C 0.312 3.688 9 O -0.348 6.348 10 C -0.036 4.036 11 O -0.187 6.187 12 C 0.109 3.891 13 C -0.231 4.231 14 C -0.091 4.091 15 C -0.169 4.169 16 C -0.106 4.106 17 C -0.149 4.149 18 C -0.182 4.182 19 O -0.333 6.333 20 Si 0.773 3.227 21 H -0.177 1.177 22 H -0.176 1.176 23 H -0.173 1.173 24 C -0.071 4.071 25 C -0.486 4.486 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.091 0.909 29 H 0.084 0.916 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.108 0.892 33 H 0.102 0.898 34 H 0.098 0.902 35 H 0.062 0.938 36 H 0.219 0.781 37 H 0.112 0.888 38 H 0.111 0.889 39 H 0.148 0.852 40 H 0.146 0.854 41 H 0.146 0.854 42 H 0.148 0.852 43 H 0.136 0.864 44 H 0.216 0.784 45 H 0.061 0.939 46 H 0.097 0.903 47 H 0.108 0.892 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 3.630 2.339 -0.493 4.347 hybrid contribution 1.911 1.228 0.464 2.318 sum 5.541 3.567 -0.029 6.590 Atomic orbital electron populations 1.26028 1.20120 1.04762 1.04384 0.79605 0.67611 0.66309 0.67268 1.26128 1.06010 1.18754 1.04613 1.26254 0.99072 1.08980 1.14274 1.22234 0.98084 0.95581 0.91186 1.61474 1.22240 1.26488 1.02733 1.44973 1.04584 1.04922 1.78155 1.19856 0.90505 0.81050 0.77340 1.90793 1.28590 1.71014 1.44363 1.22367 0.95833 0.81514 1.03903 1.86233 1.30866 1.13742 1.87823 1.18754 0.86365 0.88973 0.95037 1.21297 0.91847 1.00681 1.09252 1.21014 0.98879 0.92920 0.96289 1.21049 0.96412 0.95959 1.03475 1.21016 0.92505 0.99028 0.98083 1.19682 0.96882 0.90642 1.07677 1.24863 0.91018 1.12059 0.90223 1.86626 1.55593 1.73215 1.17895 0.85747 0.81215 0.74949 0.80814 1.17688 1.17605 1.17327 1.22253 0.97986 0.95610 0.91284 1.26251 0.99131 1.08968 1.14239 0.91215 0.91228 0.90894 0.91597 0.91096 0.91093 0.89223 0.89821 0.90152 0.93788 0.78130 0.88792 0.88864 0.85233 0.85373 0.85368 0.85204 0.86417 0.78393 0.93871 0.90269 0.89221 0.89866 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.36 8.65 101.05 0.87 1.23 16 2 Si 1.00 -2.09 11.76 -169.99 -2.00 -4.09 16 3 C -0.45 0.85 8.65 101.05 0.87 1.73 16 4 C -0.40 0.30 5.24 37.64 0.20 0.50 16 5 C 0.06 -0.03 5.61 -3.59 -0.02 -0.05 16 6 N -0.31 -0.28 4.00 -113.39 -0.45 -0.73 16 7 N -0.58 0.14 4.63 31.22 0.14 0.29 16 8 C 0.53 1.33 8.01 -10.99 -0.09 1.24 16 9 O -0.48 -3.83 16.82 -14.36 -0.24 -4.07 16 10 C 0.04 -0.02 5.22 36.00 0.19 0.17 16 11 O -0.28 -0.95 9.00 -39.32 -0.35 -1.31 16 12 C 0.15 0.35 6.66 -39.22 -0.26 0.08 16 13 C -0.21 0.01 9.04 -39.43 -0.36 -0.35 16 14 C -0.07 0.04 10.04 -39.61 -0.40 -0.36 16 15 C -0.15 0.02 10.04 -39.56 -0.40 -0.37 16 16 C -0.09 -0.06 8.66 -39.60 -0.34 -0.40 16 17 C -0.15 -0.31 5.27 -104.47 -0.55 -0.86 16 18 C -0.07 -0.16 2.38 36.01 0.09 -0.08 16 19 O -0.53 -1.77 12.88 -35.23 -0.45 -2.23 16 20 Si 0.95 0.76 25.49 -169.99 -4.33 -3.57 16 21 H -0.25 -0.02 6.74 56.52 0.38 0.36 16 22 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 23 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 24 C 0.06 -0.02 5.61 -3.59 -0.02 -0.04 16 25 C -0.40 0.26 5.24 37.64 0.20 0.45 16 26 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 27 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 28 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 29 H 0.06 -0.13 7.96 -51.93 -0.41 -0.55 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.09 0.08 7.99 -51.93 -0.42 -0.33 16 33 H 0.08 -0.15 8.00 -51.93 -0.42 -0.57 16 34 H 0.08 -0.01 8.04 -51.93 -0.42 -0.42 16 35 H 0.04 -0.10 7.58 -51.93 -0.39 -0.49 16 36 H 0.38 -1.46 8.83 -185.15 -1.63 -3.10 16 37 H 0.09 -0.28 7.66 -51.93 -0.40 -0.67 16 38 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 39 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 40 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 41 H 0.13 -0.26 8.06 -52.49 -0.42 -0.69 16 42 H 0.13 -0.09 4.89 -52.49 -0.26 -0.35 16 43 H 0.12 0.37 7.83 -51.93 -0.41 -0.03 16 44 H 0.37 -0.20 8.70 45.56 0.40 0.19 16 45 H 0.04 -0.09 7.58 -51.93 -0.39 -0.49 16 46 H 0.08 0.02 8.04 -51.93 -0.42 -0.40 16 47 H 0.09 0.10 7.99 -51.93 -0.42 -0.32 16 48 H 0.08 -0.14 7.99 -51.93 -0.42 -0.56 16 LS Contribution 388.83 15.07 5.86 5.86 Total: 0.00 -9.79 388.83 -10.30 -20.10 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -8.45 Total: -13.12 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -0.02 Total: 2.89 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.31 Total: -0.45 kcal Atomic # 8 Polarization: -6.56 SS G_CDS: -1.05 Total: -7.61 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -6.33 Total: -7.66 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -9.79 -10.30 -20.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_2989392.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.457 kcal (2) G-P(sol) polarization free energy of solvation -9.793 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.250 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds