Wall clock time and date at job start Thu Mar 4 2021 13:02:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86300 * 110.01047 * 2 1 4 4 C 1.87570 * 110.02975 * 121.38686 * 2 1 3 5 5 C 1.53936 * 106.83610 * 163.10618 * 4 2 1 6 6 N 1.46443 * 109.45643 * 301.98878 * 5 4 2 7 7 N 1.36595 * 111.00044 * 204.97041 * 6 5 4 8 8 C 1.34777 * 120.00100 * 120.00342 * 7 6 5 9 9 O 1.21279 * 120.00166 * 359.97438 * 8 7 6 10 10 C 1.50706 * 119.99762 * 180.02562 * 8 7 6 11 11 O 1.42906 * 109.46702 * 179.97438 * 10 8 7 12 12 C 1.35903 * 116.99522 * 179.97438 * 11 10 8 13 13 C 1.38711 * 120.05778 * 359.72788 * 12 11 10 14 14 C 1.38165 * 119.93985 * 179.76453 * 13 12 11 15 15 C 1.38247 * 120.05776 * 0.48565 * 14 13 12 16 16 C 1.38282 * 120.10987 * 359.76886 * 15 14 13 17 17 C 1.50699 * 119.97102 * 179.97438 * 16 15 14 18 18 O 1.42899 * 109.47607 * 245.02462 * 17 16 15 19 19 Si 1.86303 * 109.47085 * 5.02686 * 17 16 15 20 20 H 1.48501 * 109.47047 * 299.99538 * 19 17 16 21 21 H 1.48500 * 109.46932 * 59.99586 * 19 17 16 22 22 H 1.48499 * 109.47190 * 179.97438 * 19 17 16 23 23 C 1.38128 * 120.05821 * 359.97438 * 16 15 14 24 24 C 1.46444 * 113.64257 * 79.02132 * 6 5 4 25 25 C 1.53929 * 109.45827 * 280.98156 * 24 6 5 26 26 H 1.09001 * 109.47291 * 298.61160 * 1 2 3 27 27 H 1.09001 * 109.47144 * 58.61536 * 1 2 3 28 28 H 1.09007 * 109.46790 * 178.61178 * 1 2 3 29 29 H 1.09000 * 109.47119 * 181.38272 * 3 2 1 30 30 H 1.08994 * 109.47123 * 301.38843 * 3 2 1 31 31 H 1.08999 * 109.46766 * 61.38793 * 3 2 1 32 32 H 1.08991 * 109.98410 * 43.77546 * 4 2 1 33 33 H 1.09000 * 110.05429 * 282.47207 * 4 2 1 34 34 H 1.08998 * 109.47298 * 181.99991 * 5 4 2 35 35 H 1.08996 * 109.47575 * 61.98583 * 5 4 2 36 36 H 0.96999 * 119.99852 * 299.99988 * 7 6 5 37 37 H 1.09000 * 109.47318 * 299.99141 * 10 8 7 38 38 H 1.09000 * 109.47161 * 59.99772 * 10 8 7 39 39 H 1.08000 * 120.02686 * 359.97438 * 13 12 11 40 40 H 1.08002 * 119.96691 * 180.23616 * 14 13 12 41 41 H 1.07999 * 119.94076 * 179.74347 * 15 14 13 42 42 H 1.09002 * 109.46732 * 125.02512 * 17 16 15 43 43 H 0.96698 * 113.99634 * 180.02562 * 18 17 16 44 44 H 1.07997 * 120.02980 * 180.02562 * 23 16 15 45 45 H 1.09010 * 109.47153 * 40.97058 * 24 6 5 46 46 H 1.08995 * 109.47544 * 160.98125 * 24 6 5 47 47 H 1.08994 * 109.98009 * 298.66963 * 25 24 6 48 48 H 1.08998 * 110.05229 * 177.38017 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5005 1.7505 0.0000 4 6 2.5054 -0.9178 1.5044 5 6 3.9827 -1.2500 1.2268 6 7 4.0817 -2.0464 0.0018 7 7 5.2167 -2.8064 0.0025 8 6 5.1285 -4.1493 -0.0718 9 8 4.0415 -4.6829 -0.1387 10 6 6.3808 -4.9878 -0.0704 11 8 6.0284 -6.3701 -0.1558 12 6 7.0491 -7.2673 -0.1665 13 6 8.3626 -6.8262 -0.1020 14 6 9.3983 -7.7408 -0.1081 15 6 9.1266 -9.0939 -0.1886 16 6 7.8182 -9.5359 -0.2583 17 6 7.5257 -11.0116 -0.3465 18 8 6.9188 -11.3025 -1.6070 19 14 9.1151 -11.9703 -0.1865 20 1 10.0395 -11.5826 -1.2821 21 1 9.7457 -11.6680 1.1235 22 1 8.8268 -13.4245 -0.2727 23 6 6.7791 -8.6259 -0.2471 24 6 3.9826 -1.2522 -1.2246 25 6 2.5054 -0.9205 -1.5027 26 1 -0.3634 0.4921 0.9022 27 1 -0.3633 0.5352 -0.8773 28 1 -0.3633 -1.0274 -0.0249 29 1 3.5902 1.7404 -0.0248 30 1 2.1219 2.2751 -0.8772 31 1 2.1624 2.2603 0.9022 32 1 1.9382 -1.8369 1.6503 33 1 2.4257 -0.2867 2.3895 34 1 4.3908 -1.8175 2.0630 35 1 4.5465 -0.3251 1.1055 36 1 6.0861 -2.3797 0.0563 37 1 7.0003 -4.7170 -0.9254 38 1 6.9356 -4.8108 0.8509 39 1 8.5754 -5.7690 -0.0436 40 1 10.4210 -7.3980 -0.0541 41 1 9.9378 -9.8069 -0.1974 42 1 6.8472 -11.2961 0.4578 43 1 6.7023 -12.2365 -1.7330 44 1 5.7573 -8.9716 -0.3012 45 1 4.5465 -0.3270 -1.1049 46 1 4.3908 -1.8212 -2.0599 47 1 1.9381 -1.8399 -1.6471 48 1 2.4243 -0.2903 -2.3883 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_4860298.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:02:05 Heat of formation + Delta-G solvation = -70.840120 kcal Electronic energy + Delta-G solvation = -26671.471106 eV Core-core repulsion = 22851.891993 eV Total energy + Delta-G solvation = -3819.579114 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 338.162 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.51770 -40.78123 -39.17846 -38.19662 -37.22510 -34.21240 -32.56373 -32.22862 -31.70441 -30.06789 -29.19780 -28.49389 -27.61276 -26.65045 -24.01310 -23.63746 -22.74376 -22.03975 -21.45859 -19.13884 -18.91595 -18.47091 -17.81462 -17.45607 -17.34279 -16.88727 -16.49758 -15.97758 -15.83436 -15.55495 -15.03866 -15.00822 -14.66529 -14.42085 -14.34507 -14.08873 -13.91651 -13.73636 -13.72601 -13.63865 -13.54646 -13.32566 -13.28895 -13.17708 -13.08580 -12.89488 -12.47917 -12.36287 -12.16495 -12.07358 -11.91036 -11.64837 -10.94971 -10.80618 -10.54885 -10.38244 -10.37929 -10.28052 -9.85767 -9.74218 -9.21635 0.24238 0.45078 1.09819 1.20821 1.44436 1.50501 1.60680 1.67492 1.82188 1.87615 1.90089 2.35434 2.56463 2.67516 3.21260 3.41195 3.48542 3.76086 3.82626 3.90692 3.91764 4.05256 4.07625 4.20423 4.21656 4.22866 4.26637 4.30894 4.55071 4.58064 4.60287 4.64419 4.65131 4.65757 4.75768 4.77702 4.79854 4.91665 5.01447 5.26554 5.33689 5.38484 5.38760 5.47762 5.49525 5.53470 5.67408 5.83993 6.17818 6.27212 6.43077 6.59214 7.47317 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.997 3.003 3 C -0.448 4.448 4 C -0.399 4.399 5 C 0.056 3.944 6 N -0.312 5.312 7 N -0.579 5.579 8 C 0.529 3.471 9 O -0.483 6.483 10 C 0.046 3.954 11 O -0.287 6.287 12 C 0.130 3.870 13 C -0.207 4.207 14 C -0.072 4.072 15 C -0.160 4.160 16 C -0.035 4.035 17 C -0.085 4.085 18 O -0.543 6.543 19 Si 0.951 3.049 20 H -0.248 1.248 21 H -0.249 1.249 22 H -0.257 1.257 23 C -0.116 4.116 24 C 0.055 3.945 25 C -0.399 4.399 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.072 0.928 29 H 0.065 0.935 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.080 0.920 35 H 0.044 0.956 36 H 0.381 0.619 37 H 0.095 0.905 38 H 0.095 0.905 39 H 0.130 0.870 40 H 0.131 0.869 41 H 0.123 0.877 42 H 0.079 0.921 43 H 0.381 0.619 44 H 0.137 0.863 45 H 0.044 0.956 46 H 0.079 0.921 47 H 0.089 0.911 48 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.032 3.172 1.399 5.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.193 2.807 3 C -0.555 4.555 4 C -0.486 4.486 5 C -0.071 4.071 6 N -0.130 5.130 7 N -0.326 5.326 8 C 0.314 3.686 9 O -0.352 6.352 10 C -0.034 4.034 11 O -0.199 6.199 12 C 0.084 3.916 13 C -0.225 4.225 14 C -0.090 4.090 15 C -0.178 4.178 16 C -0.035 4.035 17 C -0.195 4.195 18 O -0.349 6.349 19 Si 0.774 3.226 20 H -0.171 1.171 21 H -0.173 1.173 22 H -0.181 1.181 23 C -0.135 4.135 24 C -0.072 4.072 25 C -0.486 4.486 26 H 0.088 0.912 27 H 0.088 0.912 28 H 0.091 0.909 29 H 0.084 0.916 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.107 0.893 33 H 0.102 0.898 34 H 0.098 0.902 35 H 0.063 0.937 36 H 0.220 0.780 37 H 0.113 0.887 38 H 0.113 0.887 39 H 0.148 0.852 40 H 0.149 0.851 41 H 0.140 0.860 42 H 0.097 0.903 43 H 0.229 0.771 44 H 0.155 0.845 45 H 0.062 0.938 46 H 0.098 0.902 47 H 0.108 0.892 48 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 3.515 2.586 1.341 4.565 hybrid contribution 0.867 0.739 0.071 1.141 sum 4.382 3.324 1.412 5.679 Atomic orbital electron populations 1.26031 1.20125 1.04748 1.04393 0.79591 0.67591 0.66304 0.67219 1.26128 1.06014 1.18754 1.04622 1.26258 0.99054 1.08967 1.14309 1.22238 0.98098 0.95606 0.91160 1.61482 1.22211 1.26520 1.02773 1.44968 1.04648 1.04920 1.78017 1.19883 0.90493 0.81084 0.77189 1.90775 1.28702 1.71101 1.44671 1.22359 0.95764 0.81282 1.04042 1.86164 1.31305 1.14033 1.88410 1.18999 0.86480 0.89539 0.96555 1.21273 0.91856 1.00590 1.08815 1.20850 0.99018 0.92292 0.96849 1.20927 0.95589 0.96439 1.04827 1.19037 0.92659 0.93452 0.98401 1.24790 1.08237 0.97098 0.89352 1.86523 1.82837 1.31372 1.34130 0.85677 0.76880 0.78465 0.81597 1.17100 1.17279 1.18101 1.20245 1.00476 0.89069 1.03681 1.22259 0.98012 0.95630 0.91259 1.26254 0.99112 1.08974 1.14274 0.91215 0.91217 0.90912 0.91593 0.91086 0.91093 0.89253 0.89806 0.90156 0.93747 0.78045 0.88712 0.88689 0.85198 0.85111 0.85952 0.90286 0.77141 0.84503 0.93830 0.90241 0.89235 0.89841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.42 8.65 101.05 0.87 1.29 16 2 Si 1.00 -2.24 11.76 -169.99 -2.00 -4.24 16 3 C -0.45 0.90 8.65 101.05 0.87 1.77 16 4 C -0.40 0.38 5.24 37.65 0.20 0.58 16 5 C 0.06 -0.04 5.61 -3.58 -0.02 -0.06 16 6 N -0.31 -0.24 4.00 -113.39 -0.45 -0.69 16 7 N -0.58 0.20 4.63 31.22 0.14 0.35 16 8 C 0.53 1.27 8.01 -10.98 -0.09 1.18 16 9 O -0.48 -3.77 16.82 -14.35 -0.24 -4.01 16 10 C 0.05 -0.02 5.22 36.01 0.19 0.17 16 11 O -0.29 -1.04 9.67 -39.34 -0.38 -1.42 16 12 C 0.13 0.36 6.69 -39.22 -0.26 0.09 16 13 C -0.21 -0.10 9.04 -39.43 -0.36 -0.45 16 14 C -0.07 -0.03 10.04 -39.60 -0.40 -0.42 16 15 C -0.16 -0.22 8.67 -39.56 -0.34 -0.57 16 16 C -0.04 -0.08 5.38 -104.65 -0.56 -0.64 16 17 C -0.08 -0.03 2.79 36.01 0.10 0.07 16 18 O -0.54 -0.54 12.81 -35.23 -0.45 -0.99 16 19 Si 0.95 -0.38 25.14 -169.99 -4.27 -4.65 16 20 H -0.25 -0.21 7.04 56.52 0.40 0.18 16 21 H -0.25 -0.02 7.11 56.52 0.40 0.39 16 22 H -0.26 0.08 7.11 56.52 0.40 0.48 16 23 C -0.12 -0.38 9.62 -39.43 -0.38 -0.76 16 24 C 0.06 -0.02 5.61 -3.59 -0.02 -0.04 16 25 C -0.40 0.28 5.24 37.64 0.20 0.48 16 26 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 27 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 28 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 29 H 0.06 -0.14 7.96 -51.93 -0.41 -0.55 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 32 H 0.09 0.06 7.99 -51.93 -0.42 -0.36 16 33 H 0.08 -0.17 8.00 -51.93 -0.42 -0.58 16 34 H 0.08 -0.03 8.04 -51.93 -0.42 -0.45 16 35 H 0.04 -0.11 7.58 -51.93 -0.39 -0.50 16 36 H 0.38 -1.51 8.83 -185.16 -1.63 -3.15 16 37 H 0.10 -0.29 7.65 -51.93 -0.40 -0.69 16 38 H 0.10 -0.31 7.68 -51.93 -0.40 -0.71 16 39 H 0.13 -0.32 6.30 -52.49 -0.33 -0.65 16 40 H 0.13 -0.28 8.06 -52.49 -0.42 -0.70 16 41 H 0.12 0.00 4.86 -52.49 -0.26 -0.25 16 42 H 0.08 -0.11 7.96 -51.93 -0.41 -0.52 16 43 H 0.38 -1.36 8.74 45.56 0.40 -0.97 16 44 H 0.14 0.46 8.06 -52.49 -0.42 0.03 16 45 H 0.04 -0.10 7.58 -51.92 -0.39 -0.49 16 46 H 0.08 0.02 8.04 -51.93 -0.42 -0.40 16 47 H 0.09 0.09 7.99 -51.93 -0.42 -0.33 16 48 H 0.08 -0.14 7.99 -51.93 -0.42 -0.56 16 LS Contribution 389.66 15.07 5.87 5.87 Total: 0.00 -10.14 389.66 -10.22 -20.36 By element: Atomic # 1 Polarization: -4.83 SS G_CDS: -8.44 Total: -13.27 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: 0.00 Total: 2.69 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.31 Total: -0.35 kcal Atomic # 8 Polarization: -5.35 SS G_CDS: -1.07 Total: -6.42 kcal Atomic # 14 Polarization: -2.61 SS G_CDS: -6.27 Total: -8.89 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -10.14 -10.22 -20.36 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_4860298.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.478 kcal (2) G-P(sol) polarization free energy of solvation -10.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.619 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.221 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.362 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.840 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds