Wall clock time and date at job start Thu Mar 4 2021 13:02:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.37644 * 125.67629 * 2 1 4 4 C 1.46669 * 126.22385 * 0.03619 * 3 2 1 5 5 O 1.21700 * 120.00279 * 354.22337 * 4 3 2 6 6 N 1.34778 * 120.00286 * 174.22199 * 4 3 2 7 7 N 1.36595 * 120.00341 * 185.07286 * 6 4 3 8 8 C 1.46445 * 110.99949 * 247.40443 * 7 6 4 9 9 C 1.53932 * 109.45923 * 155.02854 * 8 7 6 10 10 Si 1.87569 * 106.83628 * 58.00789 * 9 8 7 11 11 C 1.86299 * 110.03177 * 196.89343 * 10 9 8 12 12 C 1.86306 * 110.11650 * 75.46776 * 10 9 8 13 13 C 1.87569 * 106.56684 * 316.15994 * 10 9 8 14 14 C 1.46440 * 111.00289 * 119.99859 * 7 6 4 15 15 C 1.37882 * 107.55185 * 179.97438 * 3 2 1 16 16 C 1.39877 * 107.09329 * 0.26808 * 15 3 2 17 17 Br 1.89092 * 126.07604 * 179.71457 * 16 15 3 18 18 C 1.35508 * 107.85063 * 359.56160 * 16 15 3 19 19 C 1.50699 * 125.57076 * 180.14177 * 18 16 15 20 20 O 1.42898 * 109.47328 * 125.17172 * 19 18 16 21 21 Si 1.86305 * 109.47049 * 245.16711 * 19 18 16 22 22 H 1.48501 * 109.47055 * 54.70212 * 21 19 18 23 23 H 1.48506 * 109.46835 * 174.69712 * 21 19 18 24 24 H 1.48492 * 109.47293 * 294.70076 * 21 19 18 25 25 H 1.09003 * 109.47383 * 93.95685 * 1 2 3 26 26 H 1.09002 * 109.47111 * 213.95139 * 1 2 3 27 27 H 1.09001 * 109.47304 * 333.95626 * 1 2 3 28 28 H 0.96996 * 119.99602 * 5.07100 * 6 4 3 29 29 H 1.08996 * 109.47202 * 275.02529 * 8 7 6 30 30 H 1.08997 * 109.46994 * 35.03572 * 8 7 6 31 31 H 1.09001 * 109.97819 * 298.67874 * 9 8 7 32 32 H 1.09003 * 110.05165 * 177.38112 * 9 8 7 33 33 H 1.08999 * 109.47199 * 177.12606 * 11 10 9 34 34 H 1.09003 * 109.47524 * 297.13077 * 11 10 9 35 35 H 1.09000 * 109.46767 * 57.12778 * 11 10 9 36 36 H 1.08997 * 109.46956 * 302.82775 * 12 10 9 37 37 H 1.09000 * 109.46804 * 62.82175 * 12 10 9 38 38 H 1.08999 * 109.47443 * 182.82283 * 12 10 9 39 39 H 1.08994 * 109.97592 * 284.50579 * 13 10 9 40 40 H 1.09004 * 110.05522 * 163.21419 * 13 10 9 41 41 H 1.08994 * 109.47406 * 324.96729 * 14 7 6 42 42 H 1.08997 * 109.47358 * 84.97132 * 14 7 6 43 43 H 1.08000 * 126.45462 * 179.97438 * 15 3 2 44 44 H 1.08995 * 109.47366 * 5.17102 * 19 18 16 45 45 H 0.96696 * 114.00417 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8120 2.5122 0.0007 5 8 0.6262 2.7649 -0.1046 6 7 2.7065 3.5136 0.1182 7 7 2.2756 4.8055 0.2232 8 6 2.6452 5.5801 -0.9635 9 6 1.6729 6.7621 -1.1276 10 14 1.7767 7.7738 0.4485 11 6 0.3053 8.9094 0.5759 12 6 3.3525 8.7674 0.4695 13 6 1.7694 6.5507 1.8705 14 6 2.7238 5.4077 1.4805 15 6 3.5781 0.6892 0.0006 16 6 3.5529 -0.7093 -0.0053 17 35 5.0609 -1.8501 -0.0150 18 6 2.2558 -1.1015 0.0006 19 6 1.7714 -2.5285 0.0002 20 8 0.8891 -2.7323 1.1056 21 14 0.8651 -2.8763 -1.5899 22 1 1.7406 -2.5419 -2.7419 23 1 0.4997 -4.3146 -1.6470 24 1 -0.3671 -2.0498 -1.6484 25 1 -0.3634 -0.0709 -1.0252 26 1 -0.3633 -0.8525 0.5739 27 1 -0.3634 0.9233 0.4512 28 1 3.6562 3.3167 0.1281 29 1 3.6609 5.9583 -0.8486 30 1 2.5927 4.9413 -1.8451 31 1 0.6570 6.3922 -1.2665 32 1 1.9670 7.3721 -1.9818 33 1 0.3483 9.4553 1.5183 34 1 0.3185 9.6157 -0.2542 35 1 -0.6117 8.3214 0.5381 36 1 4.2061 8.0969 0.3698 37 1 3.3472 9.4746 -0.3599 38 1 3.4262 9.3120 1.4108 39 1 0.7629 6.1605 2.0209 40 1 2.1209 7.0348 2.7817 41 1 2.7250 4.6515 2.2655 42 1 3.7318 5.8029 1.3551 43 1 4.4582 1.3151 0.0004 44 1 2.6242 -3.2017 0.0872 45 1 0.5376 -3.6309 1.1679 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915442_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:02:15 Heat of formation + Delta-G solvation = -8.206550 kcal Electronic energy + Delta-G solvation = -26456.178667 eV Core-core repulsion = 22680.979967 eV Total energy + Delta-G solvation = -3775.198700 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 389.068 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.86295 -40.83884 -38.55541 -37.75821 -34.81324 -34.05959 -32.23309 -32.14564 -31.01091 -29.43248 -28.55119 -28.33609 -27.39025 -26.37793 -23.93746 -23.24600 -22.20888 -21.55629 -20.45360 -19.15306 -18.63561 -18.16124 -17.31417 -16.98090 -16.54778 -16.16698 -15.87113 -15.55510 -15.11810 -14.88077 -14.65451 -14.38852 -14.30752 -14.22940 -13.97268 -13.84707 -13.81911 -13.59765 -13.55000 -13.26667 -13.19251 -13.05394 -13.00619 -12.82070 -12.78598 -12.31605 -12.28761 -12.01925 -11.88841 -11.34393 -11.10105 -10.77899 -10.67655 -10.46718 -10.45246 -10.21846 -9.81346 -9.70469 -9.27573 0.12171 0.60269 0.85568 1.15643 1.22304 1.35203 1.44326 1.80943 1.82435 1.95635 1.98226 2.07998 2.16046 2.67325 3.11728 3.23098 3.53306 3.61171 3.77563 4.04305 4.19054 4.20056 4.27801 4.29678 4.33038 4.36686 4.42754 4.61636 4.66422 4.67218 4.69621 4.82012 4.82797 4.85312 4.86924 4.90241 5.01290 5.25243 5.43792 5.45233 5.58482 5.59595 5.66843 5.80414 5.90926 6.12842 6.30371 6.68113 7.39543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.054 3.946 2 N -0.393 5.393 3 C -0.050 4.050 4 C 0.607 3.393 5 O -0.554 6.554 6 N -0.557 5.557 7 N -0.333 5.333 8 C 0.053 3.947 9 C -0.413 4.413 10 Si 1.064 2.936 11 C -0.462 4.462 12 C -0.451 4.451 13 C -0.412 4.412 14 C 0.053 3.947 15 C -0.101 4.101 16 C -0.178 4.178 17 Br -0.014 7.014 18 C 0.085 3.915 19 C -0.060 4.060 20 O -0.555 6.555 21 Si 0.953 3.047 22 H -0.264 1.264 23 H -0.225 1.225 24 H -0.250 1.250 25 H 0.084 0.916 26 H 0.111 0.889 27 H 0.096 0.904 28 H 0.399 0.601 29 H 0.067 0.933 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.094 0.906 33 H 0.071 0.929 34 H 0.071 0.929 35 H 0.061 0.939 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.073 0.927 39 H 0.068 0.932 40 H 0.096 0.904 41 H 0.071 0.929 42 H 0.068 0.932 43 H 0.181 0.819 44 H 0.108 0.892 45 H 0.407 0.593 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.844 -0.306 0.067 2.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.066 5.066 3 C -0.166 4.166 4 C 0.395 3.605 5 O -0.432 6.432 6 N -0.300 5.300 7 N -0.152 5.152 8 C -0.073 4.073 9 C -0.498 4.498 10 Si 1.255 2.745 11 C -0.569 4.569 12 C -0.559 4.559 13 C -0.497 4.497 14 C -0.074 4.074 15 C -0.128 4.128 16 C -0.263 4.263 17 Br 0.070 6.930 18 C -0.037 4.037 19 C -0.170 4.170 20 O -0.365 6.365 21 Si 0.773 3.227 22 H -0.188 1.188 23 H -0.147 1.147 24 H -0.174 1.174 25 H 0.102 0.898 26 H 0.130 0.870 27 H 0.114 0.886 28 H 0.240 0.760 29 H 0.085 0.915 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.112 0.888 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.080 0.920 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.087 0.913 40 H 0.115 0.885 41 H 0.090 0.910 42 H 0.087 0.913 43 H 0.198 0.802 44 H 0.126 0.874 45 H 0.259 0.741 Dipole moment (debyes) X Y Z Total from point charges 1.359 -0.101 -0.640 1.506 hybrid contribution 0.831 -0.291 0.254 0.916 sum 2.190 -0.391 -0.387 2.259 Atomic orbital electron populations 1.22667 0.74691 1.06599 1.04672 1.43857 1.07608 1.04018 1.51101 1.19916 0.90373 0.87323 1.18957 1.16771 0.85188 0.82710 0.75819 1.90778 1.17500 1.84698 1.50233 1.44554 1.08581 1.01370 1.75537 1.61427 1.59394 0.90654 1.03733 1.22298 0.98582 0.95267 0.91195 1.26466 1.01327 1.04409 1.17594 0.78607 0.66366 0.64678 0.64819 1.26248 1.15076 1.10858 1.04699 1.26151 1.15734 1.09138 1.04899 1.26445 1.01540 1.07326 1.14365 1.22304 0.98182 0.97503 0.89366 1.21496 0.95319 0.93009 1.02948 1.20878 0.91239 0.94886 1.19309 1.96652 1.35266 1.62820 1.98237 1.19951 0.89224 0.88707 1.05824 1.24390 0.99434 0.91586 1.01580 1.86418 1.64266 1.38109 1.47667 0.85688 0.79824 0.82568 0.74658 1.18843 1.14696 1.17372 0.89790 0.87033 0.88568 0.75953 0.91461 0.91525 0.91425 0.88770 0.90963 0.91031 0.91989 0.90914 0.90884 0.90781 0.91288 0.88529 0.91014 0.91346 0.80178 0.87413 0.74110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.24 8.83 127.77 1.13 1.37 16 2 N -0.39 -2.48 3.12 -519.62 -1.62 -4.10 16 3 C -0.05 -0.30 6.88 40.35 0.28 -0.03 16 4 C 0.61 4.95 7.87 86.44 0.68 5.63 16 5 O -0.55 -8.53 14.99 -4.35 -0.07 -8.59 16 6 N -0.56 -1.27 4.62 -176.39 -0.81 -2.09 16 7 N -0.33 -0.90 4.01 -512.69 -2.05 -2.96 16 8 C 0.05 -0.01 5.61 86.70 0.49 0.48 16 9 C -0.41 0.40 5.24 72.30 0.38 0.77 16 10 Si 1.06 -5.02 11.76 68.60 0.81 -4.21 16 11 C -0.46 0.75 8.65 113.37 0.98 1.74 16 12 C -0.45 2.45 8.65 113.37 0.98 3.43 16 13 C -0.41 0.67 5.24 72.29 0.38 1.05 16 14 C 0.05 -0.05 5.61 86.70 0.49 0.44 16 15 C -0.10 -0.23 10.34 22.58 0.23 0.00 16 16 C -0.18 -0.72 6.53 22.04 0.14 -0.57 16 17 Br -0.01 -0.03 33.06 -20.37 -0.67 -0.70 16 18 C 0.08 0.38 5.14 41.34 0.21 0.59 16 19 C -0.06 0.05 2.78 71.24 0.20 0.24 16 20 O -0.55 1.26 11.30 -148.98 -1.68 -0.43 16 21 Si 0.95 -1.26 26.81 68.60 1.84 0.58 16 22 H -0.26 -0.71 7.11 99.48 0.71 0.00 16 23 H -0.22 0.84 7.11 99.48 0.71 1.54 16 24 H -0.25 -0.05 5.90 99.48 0.59 0.54 16 25 H 0.08 0.29 7.08 -2.39 -0.02 0.27 16 26 H 0.11 0.17 6.36 -2.39 -0.02 0.16 16 27 H 0.10 0.74 6.23 -2.39 -0.01 0.72 16 28 H 0.40 -1.59 7.73 -215.50 -1.67 -3.26 16 29 H 0.07 -0.34 7.58 -2.39 -0.02 -0.35 16 30 H 0.07 0.15 8.04 -2.39 -0.02 0.13 16 31 H 0.07 0.24 7.99 -2.39 -0.02 0.22 16 32 H 0.09 -0.33 7.99 -2.39 -0.02 -0.35 16 33 H 0.07 -0.16 7.96 -2.39 -0.02 -0.18 16 34 H 0.07 -0.15 7.96 -2.39 -0.02 -0.17 16 35 H 0.06 0.03 7.96 -2.39 -0.02 0.01 16 36 H 0.07 -0.45 7.96 -2.39 -0.02 -0.47 16 37 H 0.07 -0.38 7.96 -2.39 -0.02 -0.40 16 38 H 0.07 -0.40 7.96 -2.39 -0.02 -0.42 16 39 H 0.07 0.17 7.99 -2.39 -0.02 0.15 16 40 H 0.10 -0.42 8.00 -2.38 -0.02 -0.44 16 41 H 0.07 0.06 8.04 -2.39 -0.02 0.04 16 42 H 0.07 -0.38 7.58 -2.39 -0.02 -0.40 16 43 H 0.18 -0.76 7.45 -2.91 -0.02 -0.79 16 44 H 0.11 -0.34 6.96 -2.39 -0.02 -0.36 16 45 H 0.41 -4.85 8.74 -74.06 -0.65 -5.50 16 Total: 0.00 -18.28 378.68 1.64 -16.64 By element: Atomic # 1 Polarization: -8.63 SS G_CDS: -0.66 Total: -9.29 kcal Atomic # 6 Polarization: 8.58 SS G_CDS: 6.57 Total: 15.15 kcal Atomic # 7 Polarization: -4.65 SS G_CDS: -4.49 Total: -9.14 kcal Atomic # 8 Polarization: -7.27 SS G_CDS: -1.75 Total: -9.02 kcal Atomic # 14 Polarization: -6.28 SS G_CDS: 2.65 Total: -3.63 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -0.67 Total: -0.70 kcal Total: -18.28 1.64 -16.64 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.438 kcal (2) G-P(sol) polarization free energy of solvation -18.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.842 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.207 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds