Wall clock time and date at job start Thu Mar 4 2021 13:02:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86299 * 110.01373 * 2 1 4 4 C 1.87579 * 110.02873 * 121.38305 * 2 1 3 5 5 C 1.53928 * 106.83689 * 163.10341 * 4 2 1 6 6 N 1.46439 * 109.46172 * 301.99210 * 5 4 2 7 7 N 1.36595 * 111.00010 * 204.97208 * 6 5 4 8 8 C 1.34774 * 120.00237 * 119.99991 * 7 6 5 9 9 O 1.21704 * 120.00064 * 359.97438 * 8 7 6 10 10 C 1.46677 * 120.00490 * 179.97438 * 8 7 6 11 11 C 1.37866 * 126.23737 * 179.97438 * 10 8 7 12 12 C 1.39835 * 107.08650 * 179.80471 * 11 10 8 13 13 C 1.35451 * 107.86581 * 0.38260 * 12 11 10 14 14 C 1.50701 * 125.56710 * 179.88051 * 13 12 11 15 15 O 1.42900 * 109.46882 * 119.69289 * 14 13 12 16 16 Si 1.86300 * 109.46948 * 359.69274 * 14 13 12 17 17 H 1.48500 * 109.46912 * 180.02562 * 16 14 13 18 18 H 1.48503 * 109.46942 * 299.99736 * 16 14 13 19 19 H 1.48503 * 109.47262 * 60.00072 * 16 14 13 20 20 N 1.35535 * 108.87107 * 359.61107 * 13 12 11 21 21 C 1.46444 * 113.63838 * 79.01911 * 6 5 4 22 22 C 1.53928 * 109.46113 * 280.97715 * 21 6 5 23 23 H 1.09000 * 109.47228 * 298.61654 * 1 2 3 24 24 H 1.09006 * 109.46583 * 58.61627 * 1 2 3 25 25 H 1.09001 * 109.47171 * 178.61212 * 1 2 3 26 26 H 1.08998 * 109.47580 * 181.37916 * 3 2 1 27 27 H 1.08999 * 109.46718 * 301.38388 * 3 2 1 28 28 H 1.09000 * 109.46834 * 61.38076 * 3 2 1 29 29 H 1.08995 * 109.97894 * 43.77177 * 4 2 1 30 30 H 1.08997 * 110.05407 * 282.47958 * 4 2 1 31 31 H 1.09004 * 109.46981 * 181.99614 * 5 4 2 32 32 H 1.09002 * 109.47146 * 61.99106 * 5 4 2 33 33 H 0.96996 * 119.99675 * 299.99766 * 7 6 5 34 34 H 1.07998 * 126.45551 * 0.03880 * 11 10 8 35 35 H 1.07997 * 126.07044 * 180.27375 * 12 11 10 36 36 H 1.09004 * 109.46875 * 239.68823 * 14 13 12 37 37 H 0.96706 * 114.00057 * 299.99456 * 15 14 13 38 38 H 0.96996 * 125.68392 * 180.27462 * 20 13 12 39 39 H 1.08998 * 109.47342 * 40.98232 * 21 6 5 40 40 H 1.09001 * 109.46930 * 160.98690 * 21 6 5 41 41 H 1.08992 * 109.98216 * 298.68466 * 22 21 6 42 42 H 1.08995 * 110.05401 * 177.37895 * 22 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5006 1.7505 0.0000 4 6 2.5054 -0.9178 1.5045 5 6 3.9826 -1.2500 1.2270 6 7 4.0817 -2.0465 0.0021 7 7 5.2166 -2.8065 0.0029 8 6 5.1285 -4.1493 -0.0712 9 8 4.0376 -4.6848 -0.1384 10 6 6.3472 -4.9655 -0.0709 11 6 6.4068 -6.3411 -0.1410 12 6 7.7592 -6.6956 -0.1163 13 6 8.4858 -5.5561 -0.0248 14 6 9.9897 -5.4777 0.0330 15 8 10.4702 -4.7202 -1.0793 16 14 10.7040 -7.1971 -0.0314 17 1 12.1859 -7.1199 0.0262 18 1 10.2046 -7.9842 1.1246 19 1 10.2911 -7.8577 -1.2957 20 7 7.6398 -4.4975 0.0002 21 6 3.9827 -1.2523 -1.2243 22 6 2.5055 -0.9206 -1.5027 23 1 -0.3634 0.4922 0.9021 24 1 -0.3633 0.5352 -0.8774 25 1 -0.3633 -1.0274 -0.0249 26 1 3.5902 1.7404 -0.0247 27 1 2.1220 2.2750 -0.8773 28 1 2.1624 2.2603 0.9021 29 1 1.9380 -1.8369 1.6505 30 1 2.4256 -0.2866 2.3896 31 1 4.3907 -1.8175 2.0634 32 1 4.5464 -0.3251 1.1057 33 1 6.0860 -2.3798 0.0568 34 1 5.5672 -7.0173 -0.2068 35 1 8.1543 -7.6997 -0.1604 36 1 10.2928 -4.9927 0.9610 37 1 10.2369 -5.0941 -1.9401 38 1 7.9015 -3.5653 0.0582 39 1 4.5466 -0.3272 -1.1047 40 1 4.3909 -1.8213 -2.0596 41 1 1.9381 -1.8400 -1.6468 42 1 2.4244 -0.2904 -2.3882 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_6580494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:02:24 Heat of formation + Delta-G solvation = -25.011443 kcal Electronic energy + Delta-G solvation = -22166.778593 eV Core-core repulsion = 18886.206801 eV Total energy + Delta-G solvation = -3280.571793 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 297.142 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.51846 -40.69292 -38.43033 -37.76208 -34.25377 -32.23750 -32.19680 -31.42628 -29.51017 -28.51571 -28.50232 -26.48959 -24.01971 -23.34796 -22.19376 -21.51634 -21.10576 -19.94228 -18.59657 -18.05444 -16.86070 -16.63416 -16.49386 -15.92954 -15.48027 -15.39203 -15.19551 -14.81375 -14.48308 -14.19706 -14.12529 -14.06796 -13.95861 -13.80144 -13.63709 -13.60973 -13.32956 -13.17984 -13.11370 -12.89851 -12.40171 -12.37292 -12.18583 -11.92872 -11.12903 -10.91562 -10.76463 -10.56749 -10.39350 -10.29247 -10.07919 -9.75687 -9.26616 0.39122 0.96339 1.41848 1.45913 1.52690 1.59734 1.66485 1.80865 1.81575 1.87153 2.10303 2.45641 2.54897 3.20148 3.25189 3.52519 3.75127 4.06228 4.18568 4.20190 4.22791 4.24458 4.30626 4.41319 4.57266 4.59349 4.64273 4.64929 4.74920 4.76854 4.79125 4.90762 5.00126 5.06603 5.32923 5.37872 5.46862 5.52552 5.56593 5.81100 5.83546 6.16347 6.26376 6.31374 6.42570 7.48241 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.444 4.444 2 Si 0.996 3.004 3 C -0.448 4.448 4 C -0.399 4.399 5 C 0.055 3.945 6 N -0.310 5.310 7 N -0.582 5.582 8 C 0.605 3.395 9 O -0.496 6.496 10 C -0.047 4.047 11 C -0.095 4.095 12 C -0.206 4.206 13 C 0.022 3.978 14 C -0.068 4.068 15 O -0.543 6.543 16 Si 0.978 3.022 17 H -0.253 1.253 18 H -0.246 1.246 19 H -0.247 1.247 20 N -0.523 5.523 21 C 0.055 3.945 22 C -0.399 4.399 23 H 0.069 0.931 24 H 0.069 0.931 25 H 0.072 0.928 26 H 0.065 0.935 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.089 0.911 30 H 0.083 0.917 31 H 0.080 0.920 32 H 0.043 0.957 33 H 0.372 0.628 34 H 0.154 0.846 35 H 0.147 0.853 36 H 0.120 0.880 37 H 0.381 0.619 38 H 0.416 0.584 39 H 0.042 0.958 40 H 0.079 0.921 41 H 0.089 0.911 42 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.188 2.658 0.104 4.152 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.192 2.808 3 C -0.555 4.555 4 C -0.485 4.485 5 C -0.072 4.072 6 N -0.128 5.128 7 N -0.326 5.326 8 C 0.393 3.607 9 O -0.367 6.367 10 C -0.161 4.161 11 C -0.121 4.121 12 C -0.230 4.230 13 C -0.096 4.096 14 C -0.178 4.178 15 O -0.348 6.348 16 Si 0.798 3.202 17 H -0.177 1.177 18 H -0.170 1.170 19 H -0.170 1.170 20 N -0.120 5.120 21 C -0.072 4.072 22 C -0.485 4.485 23 H 0.088 0.912 24 H 0.088 0.912 25 H 0.091 0.909 26 H 0.084 0.916 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.108 0.892 30 H 0.102 0.898 31 H 0.098 0.902 32 H 0.061 0.939 33 H 0.210 0.790 34 H 0.171 0.829 35 H 0.164 0.836 36 H 0.138 0.862 37 H 0.229 0.771 38 H 0.254 0.746 39 H 0.061 0.939 40 H 0.097 0.903 41 H 0.108 0.892 42 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 2.609 1.678 0.505 3.143 hybrid contribution 0.771 1.526 -0.289 1.734 sum 3.380 3.205 0.216 4.663 Atomic orbital electron populations 1.26024 1.20062 1.04764 1.04405 0.79603 0.67625 0.66308 0.67230 1.26131 1.05998 1.18776 1.04631 1.26254 0.98976 1.08984 1.14308 1.22245 0.98162 0.95563 0.91220 1.61512 1.21985 1.26555 1.02707 1.45122 1.04188 1.05333 1.77983 1.16857 0.87494 0.79915 0.76474 1.90868 1.27010 1.71308 1.47482 1.20414 0.82862 0.94393 1.18456 1.21304 0.97144 0.92116 1.01547 1.20723 0.93351 0.97526 1.11449 1.21104 0.92977 0.87405 1.08149 1.24908 0.88671 1.11005 0.93234 1.86507 1.78447 1.53468 1.16369 0.85252 0.79842 0.72684 0.82442 1.17697 1.16970 1.17032 1.41946 1.05134 1.08875 1.56014 1.22263 0.98057 0.95592 0.91312 1.26246 0.99041 1.08983 1.14261 0.91204 0.91208 0.90887 0.91627 0.91074 0.91082 0.89200 0.89816 0.90200 0.93857 0.79018 0.82851 0.83566 0.86235 0.77105 0.74594 0.93941 0.90269 0.89182 0.89848 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.43 8.65 101.05 0.87 1.30 16 2 Si 1.00 -2.14 11.76 -169.99 -2.00 -4.14 16 3 C -0.45 0.83 8.65 101.05 0.87 1.70 16 4 C -0.40 0.31 5.24 37.64 0.20 0.51 16 5 C 0.06 -0.02 5.61 -3.59 -0.02 -0.04 16 6 N -0.31 -0.36 4.00 -113.39 -0.45 -0.81 16 7 N -0.58 -0.36 4.63 30.26 0.14 -0.22 16 8 C 0.61 2.02 7.89 -12.85 -0.10 1.91 16 9 O -0.50 -3.72 17.21 5.18 0.09 -3.63 16 10 C -0.05 -0.08 7.06 -81.98 -0.58 -0.65 16 11 C -0.09 -0.18 10.65 -39.12 -0.42 -0.60 16 12 C -0.21 -0.07 9.32 -39.98 -0.37 -0.44 16 13 C 0.02 -0.02 6.47 -81.95 -0.53 -0.55 16 14 C -0.07 0.15 3.08 36.01 0.11 0.26 16 15 O -0.54 0.93 12.88 -35.23 -0.45 0.47 16 16 Si 0.98 -2.05 25.83 -169.99 -4.39 -6.44 16 17 H -0.25 0.17 7.11 56.52 0.40 0.57 16 18 H -0.25 0.31 7.11 56.52 0.40 0.71 16 19 H -0.25 0.40 7.11 56.52 0.40 0.80 16 20 N -0.52 0.52 5.99 -5.69 -0.03 0.49 16 21 C 0.05 0.00 5.61 -3.59 -0.02 -0.02 16 22 C -0.40 0.25 5.24 37.64 0.20 0.45 16 23 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 24 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 25 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 26 H 0.06 -0.12 7.96 -51.93 -0.41 -0.54 16 27 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 28 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 29 H 0.09 0.06 7.99 -51.93 -0.42 -0.35 16 30 H 0.08 -0.15 8.00 -51.93 -0.42 -0.57 16 31 H 0.08 0.02 8.04 -51.93 -0.42 -0.40 16 32 H 0.04 -0.08 7.58 -51.93 -0.39 -0.48 16 33 H 0.37 -0.90 7.96 -185.16 -1.47 -2.37 16 34 H 0.15 0.26 8.06 -52.49 -0.42 -0.16 16 35 H 0.15 -0.17 6.17 -52.49 -0.32 -0.50 16 36 H 0.12 -0.39 7.96 -51.93 -0.41 -0.80 16 37 H 0.38 -1.70 8.70 45.56 0.40 -1.31 16 38 H 0.42 -1.43 8.19 -40.82 -0.33 -1.76 16 39 H 0.04 -0.07 7.58 -51.93 -0.39 -0.47 16 40 H 0.08 0.06 8.04 -51.93 -0.42 -0.36 16 41 H 0.09 0.08 7.99 -51.93 -0.42 -0.33 16 42 H 0.08 -0.14 7.99 -51.93 -0.42 -0.55 16 LS Contribution 345.11 15.07 5.20 5.20 Total: 0.00 -7.78 345.11 -8.82 -16.60 By element: Atomic # 1 Polarization: -4.23 SS G_CDS: -7.13 Total: -11.36 kcal Atomic # 6 Polarization: 3.63 SS G_CDS: 0.21 Total: 3.84 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -0.35 Total: -0.55 kcal Atomic # 8 Polarization: -2.79 SS G_CDS: -0.36 Total: -3.15 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: -6.39 Total: -10.58 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -7.78 -8.82 -16.60 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_6580494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.414 kcal (2) G-P(sol) polarization free energy of solvation -7.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.818 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.598 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds