Wall clock time and date at job start Thu Mar 4 2021 13:02:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35965 * 116.99779 * 2 1 4 4 C 1.39454 * 120.11694 * 180.02562 * 3 2 1 5 5 O 1.34771 * 133.24156 * 0.06147 * 4 3 2 6 6 C 1.34932 * 110.84082 * 179.97438 * 5 4 3 7 7 C 1.46991 * 125.13832 * 180.02562 * 6 5 4 8 8 O 1.21653 * 119.99796 * 180.02562 * 7 6 5 9 9 N 1.34777 * 120.00216 * 0.02655 * 7 6 5 10 10 N 1.36600 * 119.99708 * 180.27906 * 9 7 6 11 11 C 1.46446 * 110.99662 * 247.12441 * 10 9 7 12 12 C 1.53923 * 109.45978 * 155.03283 * 11 10 9 13 13 Si 1.87572 * 106.83868 * 58.00694 * 12 11 10 14 14 C 1.86295 * 110.03084 * 196.89767 * 13 12 11 15 15 C 1.86301 * 110.11323 * 75.47068 * 13 12 11 16 16 C 1.87566 * 106.56479 * 316.15995 * 13 12 11 17 17 C 1.46442 * 111.00262 * 119.72577 * 10 9 7 18 18 C 1.35812 * 109.71948 * 0.26402 * 6 5 4 19 19 C 1.40609 * 119.13629 * 180.02562 * 4 3 2 20 20 C 1.39781 * 120.11546 * 359.97438 * 19 4 3 21 21 C 1.50705 * 120.08767 * 180.02562 * 20 19 4 22 22 O 1.42898 * 109.46913 * 75.00720 * 21 20 19 23 23 Si 1.86303 * 109.46778 * 195.00219 * 21 20 19 24 24 H 1.48494 * 109.47189 * 60.00505 * 23 21 20 25 25 H 1.48502 * 109.46955 * 180.02562 * 23 21 20 26 26 H 1.48501 * 109.47298 * 300.00356 * 23 21 20 27 27 C 1.36625 * 119.81468 * 0.02718 * 20 19 4 28 28 C 1.38259 * 120.12389 * 0.02562 * 3 2 1 29 29 H 1.08997 * 109.47263 * 59.99483 * 1 2 3 30 30 H 1.08994 * 109.47431 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.46925 * 299.99914 * 1 2 3 32 32 H 0.97001 * 119.99727 * 359.97438 * 9 7 6 33 33 H 1.09000 * 109.47140 * 275.02820 * 11 10 9 34 34 H 1.08998 * 109.47256 * 35.03535 * 11 10 9 35 35 H 1.08998 * 109.97920 * 298.67376 * 12 11 10 36 36 H 1.09005 * 110.05783 * 177.38560 * 12 11 10 37 37 H 1.09003 * 109.47121 * 177.12955 * 14 13 12 38 38 H 1.09003 * 109.46943 * 297.12332 * 14 13 12 39 39 H 1.08995 * 109.47493 * 57.12503 * 14 13 12 40 40 H 1.09000 * 109.47107 * 302.82553 * 15 13 12 41 41 H 1.09003 * 109.47255 * 62.82351 * 15 13 12 42 42 H 1.08999 * 109.47004 * 182.82300 * 15 13 12 43 43 H 1.08998 * 109.98172 * 284.50747 * 16 13 12 44 44 H 1.09005 * 110.05560 * 163.21034 * 16 13 12 45 45 H 1.09002 * 109.47098 * 324.95692 * 17 10 9 46 46 H 1.08993 * 109.47627 * 84.96431 * 17 10 9 47 47 H 1.07999 * 126.95648 * 179.69886 * 18 6 5 48 48 H 1.08999 * 109.47280 * 315.00284 * 21 20 19 49 49 H 0.96699 * 114.00506 * 59.99650 * 22 21 20 50 50 H 1.08006 * 119.74881 * 179.97438 * 27 20 19 51 51 H 1.07998 * 119.65756 * 359.97438 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4140 0.3573 -0.0022 6 6 5.6317 0.9386 -0.0025 7 6 6.9131 0.2183 -0.0048 8 8 7.9595 0.8387 -0.0044 9 7 6.9286 -1.1294 -0.0071 10 7 8.1194 -1.7986 -0.0034 11 6 8.3217 -2.5168 -1.2636 12 6 9.8288 -2.7186 -1.5026 13 14 10.4913 -3.6652 -0.0250 14 6 12.3474 -3.5217 0.0448 15 6 9.9941 -5.4571 -0.1368 16 6 9.7285 -2.8806 1.4984 17 6 8.2399 -2.6489 1.1828 18 6 5.4945 2.2898 0.0047 19 6 4.0555 2.5510 0.0000 20 6 3.2765 3.7116 0.0006 21 6 3.9382 5.0656 0.0006 22 8 4.4600 5.3407 -1.3010 23 14 2.6867 6.3683 0.4560 24 1 2.1444 6.0824 1.8085 25 1 3.3385 7.7026 0.4554 26 1 1.5794 6.3584 -0.5335 27 6 1.9137 3.6150 0.0011 28 6 1.2957 2.3726 0.0005 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 6.0942 -1.6240 -0.0070 33 1 7.8288 -3.4876 -1.2117 34 1 7.8980 -1.9375 -2.0840 35 1 10.3264 -1.7519 -1.5792 36 1 9.9890 -3.2929 -2.4151 37 1 12.7180 -4.0316 0.9340 38 1 12.7808 -3.9802 -0.8441 39 1 12.6293 -2.4696 0.0851 40 1 8.9084 -5.5296 -0.2019 41 1 10.4419 -5.9038 -1.0245 42 1 10.3410 -5.9865 0.7507 43 1 10.2165 -1.9295 1.7115 44 1 9.8282 -3.5497 2.3532 45 1 7.7606 -2.1596 2.0307 46 1 7.7550 -3.6066 0.9942 47 1 6.2875 3.0229 0.0108 48 1 4.7509 5.0728 0.7269 49 1 3.7909 5.3501 -1.9991 50 1 1.3128 4.5125 0.0019 51 1 0.2174 2.3119 0.0005 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16915442_6672420.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:02:31 Heat of formation + Delta-G solvation = -60.892111 kcal Electronic energy + Delta-G solvation = -32736.460233 eV Core-core repulsion = 28342.178024 eV Total energy + Delta-G solvation = -4394.282209 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 378.162 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.79621 -41.25657 -40.58039 -39.10170 -38.75548 -37.01171 -34.35573 -33.68070 -32.18746 -31.97667 -31.12950 -29.46694 -28.78526 -28.34516 -28.09556 -26.28409 -24.85850 -24.05559 -23.97796 -22.23563 -22.01064 -21.78206 -19.95001 -19.06381 -18.87510 -18.36182 -17.85675 -17.73836 -17.08305 -16.83447 -16.43454 -16.33227 -16.21351 -15.84011 -15.63189 -15.29359 -15.06003 -14.78886 -14.57188 -14.30769 -14.25886 -13.97732 -13.88439 -13.62392 -13.59676 -13.58817 -13.45603 -13.31400 -13.19508 -13.07015 -13.03926 -12.84100 -12.48851 -12.31913 -12.31002 -12.09385 -12.07532 -11.67105 -11.61159 -11.04471 -10.79243 -10.59961 -10.48819 -10.41200 -10.24601 -9.88764 -9.79773 -9.03841 -0.70213 0.05633 0.59585 1.04183 1.17037 1.46623 1.50761 1.57532 1.79072 1.88734 1.95249 1.95785 2.06056 2.09783 2.36388 2.65735 2.99156 3.27321 3.41751 3.59180 3.67222 3.78089 3.84859 3.93529 4.13771 4.14332 4.23134 4.23661 4.28714 4.33601 4.38549 4.41937 4.52615 4.62146 4.63312 4.73129 4.80967 4.81059 4.83402 4.83748 4.84344 4.85362 4.88197 4.98850 5.00902 5.17388 5.29385 5.41796 5.43824 5.52779 5.59772 5.65643 5.83766 5.93636 6.08904 6.24072 6.72573 7.19638 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.333 6.333 3 C 0.136 3.864 4 C 0.023 3.977 5 O -0.182 6.182 6 C -0.030 4.030 7 C 0.619 3.381 8 O -0.522 6.522 9 N -0.558 5.558 10 N -0.334 5.334 11 C 0.051 3.949 12 C -0.413 4.413 13 Si 1.065 2.935 14 C -0.460 4.460 15 C -0.452 4.452 16 C -0.412 4.412 17 C 0.051 3.949 18 C -0.104 4.104 19 C -0.093 4.093 20 C -0.102 4.102 21 C -0.087 4.087 22 O -0.551 6.551 23 Si 0.990 3.010 24 H -0.253 1.253 25 H -0.277 1.277 26 H -0.232 1.232 27 C -0.098 4.098 28 C -0.165 4.165 29 H 0.075 0.925 30 H 0.116 0.884 31 H 0.074 0.926 32 H 0.398 0.602 33 H 0.066 0.934 34 H 0.067 0.933 35 H 0.070 0.930 36 H 0.096 0.904 37 H 0.072 0.928 38 H 0.071 0.929 39 H 0.062 0.938 40 H 0.069 0.931 41 H 0.073 0.927 42 H 0.074 0.926 43 H 0.071 0.929 44 H 0.098 0.902 45 H 0.071 0.929 46 H 0.067 0.933 47 H 0.177 0.823 48 H 0.115 0.885 49 H 0.389 0.611 50 H 0.161 0.839 51 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.222 -2.810 0.054 7.749 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.090 3.910 4 C -0.026 4.026 5 O -0.084 6.084 6 C -0.082 4.082 7 C 0.404 3.596 8 O -0.397 6.397 9 N -0.300 5.300 10 N -0.153 5.153 11 C -0.075 4.075 12 C -0.498 4.498 13 Si 1.256 2.744 14 C -0.567 4.567 15 C -0.560 4.560 16 C -0.497 4.497 17 C -0.075 4.075 18 C -0.125 4.125 19 C -0.095 4.095 20 C -0.103 4.103 21 C -0.196 4.196 22 O -0.359 6.359 23 Si 0.812 3.188 24 H -0.177 1.177 25 H -0.202 1.202 26 H -0.156 1.156 27 C -0.116 4.116 28 C -0.184 4.184 29 H 0.093 0.907 30 H 0.134 0.866 31 H 0.093 0.907 32 H 0.239 0.761 33 H 0.085 0.915 34 H 0.085 0.915 35 H 0.089 0.911 36 H 0.114 0.886 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.081 0.919 40 H 0.089 0.911 41 H 0.092 0.908 42 H 0.093 0.907 43 H 0.090 0.910 44 H 0.116 0.884 45 H 0.089 0.911 46 H 0.085 0.915 47 H 0.194 0.806 48 H 0.133 0.867 49 H 0.238 0.762 50 H 0.178 0.822 51 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -6.173 -1.900 0.624 6.488 hybrid contribution -1.006 -0.997 -0.433 1.481 sum -7.179 -2.897 0.191 7.744 Atomic orbital electron populations 1.23480 0.75353 1.06021 1.03116 1.86144 1.24281 1.25805 1.88483 1.17959 0.86127 0.86792 1.00105 1.19214 0.88196 0.87185 1.07964 1.84018 1.12704 1.35095 1.76602 1.21779 0.83520 0.92688 1.10168 1.16505 0.85127 0.81359 0.76561 1.90877 1.31375 1.67584 1.49884 1.44924 1.05195 1.04843 1.75083 1.61544 1.16435 1.32947 1.04340 1.22333 0.98578 0.97186 0.89432 1.26482 0.98044 1.09246 1.16038 0.78595 0.65594 0.65513 0.64667 1.26217 1.21464 1.04310 1.04714 1.26160 1.05696 1.19100 1.05021 1.26466 0.99074 1.07802 1.16344 1.22334 0.98965 0.95396 0.90844 1.22866 0.95417 0.94179 1.00020 1.19540 0.92290 0.92677 1.04955 1.19657 0.93357 0.94395 1.02855 1.25209 1.07429 0.97660 0.89339 1.86525 1.39257 1.93346 1.16726 0.85135 0.76586 0.75946 0.81095 1.17674 1.20200 1.15553 1.20872 0.93135 0.98823 0.98741 1.21352 1.01777 0.89646 1.05597 0.90692 0.86595 0.90714 0.76097 0.91542 0.91491 0.91112 0.88551 0.90891 0.90943 0.91858 0.91134 0.90790 0.90713 0.91006 0.88384 0.91085 0.91459 0.80611 0.86744 0.76156 0.82212 0.80396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.97 10.50 -93.15 -0.98 -1.95 16 3 C 0.14 0.49 6.70 22.57 0.15 0.64 16 4 C 0.02 0.18 7.35 23.14 0.17 0.35 16 5 O -0.18 -1.63 10.28 -13.40 -0.14 -1.77 16 6 C -0.03 -0.28 7.07 24.00 0.17 -0.11 16 7 C 0.62 6.78 7.90 86.54 0.68 7.47 16 8 O -0.52 -9.26 17.15 -4.20 -0.07 -9.33 16 9 N -0.56 -3.20 4.63 -176.18 -0.82 -4.02 16 10 N -0.33 -1.63 4.00 -512.68 -2.05 -3.69 16 11 C 0.05 0.08 5.61 86.70 0.49 0.57 16 12 C -0.41 0.04 5.24 72.29 0.38 0.42 16 13 Si 1.06 -4.27 11.76 68.60 0.81 -3.47 16 14 C -0.46 0.64 8.65 113.37 0.98 1.62 16 15 C -0.45 2.10 8.65 113.37 0.98 3.08 16 16 C -0.41 0.28 5.24 72.30 0.38 0.65 16 17 C 0.05 0.05 5.61 86.70 0.49 0.54 16 18 C -0.10 -0.89 10.68 23.79 0.25 -0.64 16 19 C -0.09 -0.62 6.16 -20.24 -0.12 -0.75 16 20 C -0.10 -0.18 5.26 -19.87 -0.10 -0.29 16 21 C -0.09 0.02 2.71 71.24 0.19 0.21 16 22 O -0.55 -0.84 12.88 -148.98 -1.92 -2.76 16 23 Si 0.99 -3.14 25.50 68.60 1.75 -1.39 16 24 H -0.25 0.58 7.11 99.48 0.71 1.28 16 25 H -0.28 -0.33 7.11 99.48 0.71 0.37 16 26 H -0.23 1.41 6.74 99.48 0.67 2.08 16 27 C -0.10 0.22 8.62 22.02 0.19 0.41 16 28 C -0.17 0.37 9.03 22.40 0.20 0.57 16 29 H 0.07 -0.71 7.66 -2.39 -0.02 -0.73 16 30 H 0.12 -1.04 8.14 -2.39 -0.02 -1.06 16 31 H 0.07 -0.70 7.66 -2.39 -0.02 -0.72 16 32 H 0.40 0.59 8.54 -215.50 -1.84 -1.25 16 33 H 0.07 -0.20 7.58 -2.39 -0.02 -0.22 16 34 H 0.07 0.27 8.04 -2.39 -0.02 0.25 16 35 H 0.07 0.28 7.99 -2.39 -0.02 0.26 16 36 H 0.10 -0.28 7.99 -2.38 -0.02 -0.30 16 37 H 0.07 -0.15 7.96 -2.39 -0.02 -0.16 16 38 H 0.07 -0.14 7.96 -2.39 -0.02 -0.16 16 39 H 0.06 0.04 7.96 -2.39 -0.02 0.02 16 40 H 0.07 -0.35 7.96 -2.39 -0.02 -0.37 16 41 H 0.07 -0.34 7.96 -2.39 -0.02 -0.36 16 42 H 0.07 -0.36 7.96 -2.39 -0.02 -0.38 16 43 H 0.07 0.23 7.99 -2.39 -0.02 0.21 16 44 H 0.10 -0.36 8.00 -2.38 -0.02 -0.38 16 45 H 0.07 0.20 8.04 -2.39 -0.02 0.18 16 46 H 0.07 -0.24 7.58 -2.39 -0.02 -0.25 16 47 H 0.18 1.33 8.06 -2.91 -0.02 1.30 16 48 H 0.11 -0.01 7.96 -2.39 -0.02 -0.02 16 49 H 0.39 -2.25 8.70 -74.06 -0.64 -2.89 16 50 H 0.16 -1.19 4.84 -2.91 -0.01 -1.21 16 51 H 0.18 -1.64 6.26 -2.91 -0.02 -1.66 16 Total: 0.00 -21.14 416.74 2.37 -18.76 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -0.80 Total: -6.16 kcal Atomic # 6 Polarization: 9.17 SS G_CDS: 6.59 Total: 15.76 kcal Atomic # 7 Polarization: -4.84 SS G_CDS: -2.87 Total: -7.70 kcal Atomic # 8 Polarization: -12.69 SS G_CDS: -3.11 Total: -15.80 kcal Atomic # 14 Polarization: -7.41 SS G_CDS: 2.56 Total: -4.85 kcal Total: -21.14 2.37 -18.76 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_6672420.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.128 kcal (2) G-P(sol) polarization free energy of solvation -21.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.764 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds