Wall clock time and date at job start Thu Mar 4 2021 13:02:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33818 * 122.45275 * 2 1 4 4 C 1.50705 * 124.51692 * 0.02562 * 3 2 1 5 5 O 1.42899 * 109.47404 * 46.45704 * 4 3 2 6 6 Si 1.86298 * 109.46748 * 166.45881 * 4 3 2 7 7 H 1.48498 * 109.46971 * 179.97438 * 6 4 3 8 8 H 1.48495 * 109.47120 * 299.99816 * 6 4 3 9 9 H 1.48504 * 109.47484 * 59.99932 * 6 4 3 10 10 S 1.70608 * 110.95872 * 180.02562 * 3 2 1 11 11 C 1.75832 * 91.56248 * 359.97438 * 10 3 2 12 12 C 1.46586 * 125.45656 * 179.97438 * 11 10 3 13 13 O 1.21701 * 119.99627 * 179.97438 * 12 11 10 14 14 N 1.34769 * 120.00171 * 359.97438 * 12 11 10 15 15 N 1.36603 * 119.99956 * 179.97438 * 14 12 11 16 16 C 1.46449 * 110.99650 * 247.40091 * 15 14 12 17 17 C 1.53925 * 109.45461 * 155.03078 * 16 15 14 18 18 Si 1.87577 * 106.83911 * 58.01057 * 17 16 15 19 19 C 1.86296 * 110.03004 * 196.89480 * 18 17 16 20 20 C 1.86297 * 110.11606 * 75.46463 * 18 17 16 21 21 C 1.87571 * 106.56244 * 316.15524 * 18 17 16 22 22 C 1.46446 * 111.00098 * 119.99802 * 15 14 12 23 23 C 1.36644 * 109.08610 * 359.74143 * 11 10 3 24 24 H 1.09003 * 109.47305 * 85.95543 * 1 2 3 25 25 H 1.08999 * 109.47047 * 325.96122 * 1 2 3 26 26 H 1.09003 * 109.46935 * 205.95556 * 1 2 3 27 27 H 1.08998 * 109.47153 * 286.45376 * 4 3 2 28 28 H 0.96697 * 114.00082 * 180.02562 * 5 4 3 29 29 H 0.96999 * 119.99967 * 359.97438 * 14 12 11 30 30 H 1.09003 * 109.46937 * 275.02634 * 16 15 14 31 31 H 1.08992 * 109.47257 * 35.03577 * 16 15 14 32 32 H 1.08998 * 109.98404 * 298.67291 * 17 16 15 33 33 H 1.09004 * 110.05430 * 177.37875 * 17 16 15 34 34 H 1.08994 * 109.47177 * 177.12643 * 19 18 17 35 35 H 1.09004 * 109.46859 * 297.12325 * 19 18 17 36 36 H 1.09003 * 109.47519 * 57.12046 * 19 18 17 37 37 H 1.08999 * 109.47391 * 302.82394 * 20 18 17 38 38 H 1.09008 * 109.47041 * 62.82253 * 20 18 17 39 39 H 1.08992 * 109.47427 * 182.82449 * 20 18 17 40 40 H 1.08993 * 109.97964 * 284.50867 * 21 18 17 41 41 H 1.09005 * 110.05336 * 163.21209 * 21 18 17 42 42 H 1.08999 * 109.47284 * 324.96670 * 22 15 14 43 43 H 1.09004 * 109.47408 * 84.96923 * 22 15 14 44 44 H 1.07994 * 123.35883 * 180.23480 * 23 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 0.5953 2.5912 0.9775 6 14 2.9643 3.7555 0.4116 7 1 2.3835 5.1222 0.4116 8 1 3.5234 3.4548 1.7540 9 1 4.0452 3.6775 -0.6037 10 16 3.8969 0.7892 -0.0007 11 6 3.5937 -0.9427 -0.0002 12 6 4.6231 -1.9862 -0.0010 13 8 4.3001 -3.1596 -0.0001 14 7 5.9273 -1.6463 -0.0028 15 7 6.8866 -2.6188 -0.0030 16 6 7.6305 -2.6223 1.2584 17 6 8.2218 -4.0226 1.5011 18 14 9.3119 -4.4152 0.0260 19 6 9.6625 -6.2437 -0.0396 20 6 10.9094 -3.4634 0.1385 21 6 8.3566 -3.8890 -1.5000 22 6 7.7405 -2.5134 -1.1881 23 6 2.2446 -1.1601 0.0063 24 1 -0.3634 0.0725 -1.0251 25 1 -0.3633 0.8516 0.5752 26 1 -0.3633 -0.9240 0.4498 27 1 1.2251 2.7369 -0.9848 28 1 0.1696 3.4577 1.0329 29 1 6.1847 -0.7111 -0.0039 30 1 8.4373 -1.8912 1.2064 31 1 6.9588 -2.3646 2.0771 32 1 7.4202 -4.7572 1.5778 33 1 8.8165 -4.0241 2.4145 34 1 10.2535 -6.4687 -0.9274 35 1 10.2175 -6.5394 0.8507 36 1 8.7218 -6.7929 -0.0805 37 1 10.6933 -2.3969 0.2012 38 1 11.4568 -3.7760 1.0279 39 1 11.5129 -3.6603 -0.7474 40 1 7.5681 -4.6107 -1.7130 41 1 9.0298 -3.8105 -2.3538 42 1 7.1437 -2.1814 -2.0376 43 1 8.5365 -1.7930 -0.9995 44 1 1.8019 -2.1451 0.0116 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_6739946.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:02:44 Heat of formation + Delta-G solvation = -37.850785 kcal Electronic energy + Delta-G solvation = -23779.278432 eV Core-core repulsion = 20368.964282 eV Total energy + Delta-G solvation = -3410.314150 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 328.119 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.04035 -39.84090 -38.44122 -37.39264 -34.15071 -32.23962 -32.19326 -30.17022 -29.51980 -28.54541 -28.47565 -26.01499 -24.22379 -23.97262 -22.16231 -21.69682 -20.03943 -19.15506 -18.80013 -18.33327 -17.11700 -16.70700 -16.28372 -16.21578 -15.65193 -15.40036 -15.09015 -14.83963 -14.57022 -14.41812 -14.28865 -14.06345 -13.88045 -13.70797 -13.57059 -13.30615 -13.29186 -13.14616 -13.11461 -13.00078 -12.94205 -12.84431 -12.53135 -12.44528 -12.32813 -12.08688 -11.88448 -10.99905 -10.86581 -10.59312 -10.53243 -10.34504 -10.24598 -9.72321 -9.67513 -9.38234 -0.56760 0.24053 0.64212 0.93259 1.25676 1.29889 1.41909 1.57203 1.69684 1.74977 1.84800 1.90267 2.30647 2.58166 3.16700 3.26171 3.64250 3.73695 4.11634 4.16298 4.23974 4.25190 4.27598 4.34678 4.43922 4.61609 4.63819 4.64430 4.67755 4.68088 4.77293 4.79097 4.84049 4.85946 4.91281 4.94997 5.10976 5.36185 5.41341 5.44689 5.50443 5.53974 5.54768 5.88409 6.25941 6.37962 6.40138 7.51700 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.081 4.081 3 C -0.194 4.194 4 C -0.038 4.038 5 O -0.536 6.536 6 Si 0.887 3.113 7 H -0.227 1.227 8 H -0.232 1.232 9 H -0.230 1.230 10 S 0.175 5.825 11 C -0.254 4.254 12 C 0.609 3.391 13 O -0.496 6.496 14 N -0.578 5.578 15 N -0.310 5.310 16 C 0.054 3.946 17 C -0.398 4.398 18 Si 0.995 3.005 19 C -0.444 4.444 20 C -0.448 4.448 21 C -0.398 4.398 22 C 0.054 3.946 23 C -0.044 4.044 24 H 0.067 0.933 25 H 0.095 0.905 26 H 0.065 0.935 27 H 0.088 0.912 28 H 0.383 0.617 29 H 0.377 0.623 30 H 0.044 0.956 31 H 0.080 0.920 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.069 0.931 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.065 0.935 38 H 0.070 0.930 39 H 0.070 0.930 40 H 0.089 0.911 41 H 0.083 0.917 42 H 0.080 0.920 43 H 0.044 0.956 44 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.215 5.204 -0.898 5.419 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.094 4.094 3 C -0.313 4.313 4 C -0.151 4.151 5 O -0.343 6.343 6 Si 0.706 3.294 7 H -0.149 1.149 8 H -0.154 1.154 9 H -0.153 1.153 10 S 0.444 5.556 11 C -0.375 4.375 12 C 0.394 3.606 13 O -0.369 6.369 14 N -0.322 5.322 15 N -0.128 5.128 16 C -0.073 4.073 17 C -0.485 4.485 18 Si 1.191 2.809 19 C -0.552 4.552 20 C -0.555 4.555 21 C -0.485 4.485 22 C -0.073 4.073 23 C -0.077 4.077 24 H 0.086 0.914 25 H 0.113 0.887 26 H 0.084 0.916 27 H 0.106 0.894 28 H 0.231 0.769 29 H 0.215 0.785 30 H 0.062 0.938 31 H 0.098 0.902 32 H 0.108 0.892 33 H 0.102 0.898 34 H 0.088 0.912 35 H 0.088 0.912 36 H 0.091 0.909 37 H 0.084 0.916 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.108 0.892 41 H 0.102 0.898 42 H 0.099 0.901 43 H 0.063 0.937 44 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 2.912 4.848 -0.627 5.690 hybrid contribution -1.154 0.675 -0.160 1.347 sum 1.758 5.523 -0.787 5.849 Atomic orbital electron populations 1.20740 0.88690 1.04225 1.02725 1.18700 0.98504 0.90418 1.01787 1.23207 0.97587 0.98825 1.11690 1.23952 0.98072 0.97656 0.95410 1.86472 1.51470 1.37884 1.58470 0.86370 0.79214 0.80168 0.83645 1.14941 1.15405 1.15309 1.82886 1.03485 0.99305 1.69948 1.24416 0.97841 0.96258 1.18975 1.16696 0.80041 0.87496 0.76321 1.90846 1.80776 1.17937 1.47366 1.45051 1.03662 1.05535 1.77966 1.61496 1.13279 1.35039 1.02999 1.22274 0.96515 0.97879 0.90641 1.26247 1.09401 0.98920 1.13926 0.79620 0.66304 0.67655 0.67299 1.26021 1.05219 1.19579 1.04403 1.26126 1.16340 1.08375 1.04663 1.26249 1.07901 0.99802 1.14519 1.22253 0.95001 0.98017 0.91980 1.20741 0.90707 1.00266 0.96034 0.91391 0.88689 0.91558 0.89442 0.76852 0.78494 0.93827 0.90189 0.89214 0.89846 0.91218 0.91223 0.90909 0.91577 0.91091 0.91094 0.89229 0.89805 0.90104 0.93748 0.82463 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.03 9.77 36.01 0.35 0.32 16 2 C -0.08 -0.14 5.75 -106.45 -0.61 -0.75 16 3 C -0.19 -0.19 5.65 -35.86 -0.20 -0.39 16 4 C -0.04 0.05 2.67 36.01 0.10 0.15 16 5 O -0.54 0.80 10.24 -35.23 -0.36 0.44 16 6 Si 0.89 -1.34 26.25 -169.99 -4.46 -5.80 16 7 H -0.23 0.43 7.11 56.52 0.40 0.84 16 8 H -0.23 -0.04 7.11 56.52 0.40 0.36 16 9 H -0.23 0.29 7.11 56.52 0.40 0.70 16 10 S 0.18 0.09 19.33 -107.50 -2.08 -1.98 16 11 C -0.25 -0.68 6.45 -36.79 -0.24 -0.92 16 12 C 0.61 2.64 7.89 -12.90 -0.10 2.54 16 13 O -0.50 -4.01 17.16 5.19 0.09 -3.92 16 14 N -0.58 -1.12 4.63 30.24 0.14 -0.98 16 15 N -0.31 -0.60 4.00 -113.39 -0.45 -1.06 16 16 C 0.05 0.03 5.61 -3.59 -0.02 0.01 16 17 C -0.40 0.10 5.24 37.64 0.20 0.29 16 18 Si 1.00 -1.83 11.76 -169.99 -2.00 -3.83 16 19 C -0.44 0.33 8.65 101.05 0.87 1.21 16 20 C -0.45 0.72 8.65 101.05 0.87 1.59 16 21 C -0.40 0.19 5.24 37.64 0.20 0.38 16 22 C 0.05 0.01 5.61 -3.59 -0.02 -0.01 16 23 C -0.04 -0.11 9.78 -40.43 -0.40 -0.51 16 24 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 25 H 0.09 0.04 5.49 -51.93 -0.29 -0.25 16 26 H 0.07 0.00 8.11 -51.93 -0.42 -0.43 16 27 H 0.09 -0.28 7.96 -51.93 -0.41 -0.69 16 28 H 0.38 -2.26 8.74 45.56 0.40 -1.87 16 29 H 0.38 -0.19 7.94 -185.15 -1.47 -1.66 16 30 H 0.04 -0.05 7.58 -51.93 -0.39 -0.45 16 31 H 0.08 0.11 8.04 -51.93 -0.42 -0.31 16 32 H 0.09 0.11 7.99 -51.93 -0.42 -0.30 16 33 H 0.08 -0.11 7.99 -51.93 -0.42 -0.53 16 34 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 35 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 36 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 37 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 38 H 0.07 -0.11 7.96 -51.92 -0.41 -0.52 16 39 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 40 H 0.09 0.09 7.99 -51.93 -0.42 -0.33 16 41 H 0.08 -0.14 8.00 -51.93 -0.42 -0.55 16 42 H 0.08 0.06 8.04 -51.93 -0.42 -0.36 16 43 H 0.04 -0.06 7.58 -51.93 -0.39 -0.46 16 44 H 0.16 0.35 8.06 -52.49 -0.42 -0.07 16 LS Contribution 367.07 15.07 5.53 5.53 Total: 0.00 -7.26 367.07 -10.19 -17.44 By element: Atomic # 1 Polarization: -2.15 SS G_CDS: -7.60 Total: -9.75 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: 1.00 Total: 3.92 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -0.31 Total: -2.04 kcal Atomic # 8 Polarization: -3.22 SS G_CDS: -0.27 Total: -3.49 kcal Atomic # 14 Polarization: -3.17 SS G_CDS: -6.46 Total: -9.64 kcal Atomic # 16 Polarization: 0.09 SS G_CDS: -2.08 Total: -1.98 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -7.26 -10.19 -17.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_6739946.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.408 kcal (2) G-P(sol) polarization free energy of solvation -7.255 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds