Wall clock time and date at job start Thu Mar 4 2021 13:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36767 * 125.79762 * 2 1 4 4 C 1.47260 * 126.94617 * 0.02562 * 3 2 1 5 5 O 1.21623 * 119.99925 * 0.02562 * 4 3 2 6 6 N 1.34780 * 120.00282 * 180.02562 * 4 3 2 7 7 N 1.36602 * 120.00042 * 180.02562 * 6 4 3 8 8 C 1.46440 * 110.99689 * 247.40193 * 7 6 4 9 9 C 1.53923 * 109.46015 * 155.03385 * 8 7 6 10 10 Si 1.87566 * 106.84038 * 58.00315 * 9 8 7 11 11 C 1.86304 * 110.03345 * 196.89905 * 10 9 8 12 12 C 1.86305 * 110.11513 * 75.47178 * 10 9 8 13 13 C 1.87576 * 106.56758 * 316.16360 * 10 9 8 14 14 C 1.46447 * 111.00026 * 119.99818 * 7 6 4 15 15 C 1.46692 * 106.11426 * 180.02562 * 3 2 1 16 16 C 1.34484 * 106.33234 * 359.97438 * 15 3 2 17 17 C 1.50696 * 125.57372 * 179.97438 * 16 15 3 18 18 O 1.42903 * 109.47131 * 120.02351 * 17 16 15 19 19 Si 1.86305 * 109.47185 * 0.02892 * 17 16 15 20 20 H 1.48499 * 109.47126 * 179.97438 * 19 17 16 21 21 H 1.48496 * 109.46885 * 299.99843 * 19 17 16 22 22 H 1.48499 * 109.46850 * 59.99646 * 19 17 16 23 23 N 1.34655 * 125.80365 * 180.30776 * 2 1 3 24 24 H 1.08992 * 109.46952 * 90.00580 * 1 2 3 25 25 H 1.09003 * 109.47118 * 210.00617 * 1 2 3 26 26 H 1.09006 * 109.47433 * 330.00216 * 1 2 3 27 27 H 0.97000 * 119.99955 * 359.97438 * 6 4 3 28 28 H 1.09006 * 109.47012 * 275.02919 * 8 7 6 29 29 H 1.09002 * 109.47492 * 35.03137 * 8 7 6 30 30 H 1.09001 * 109.97448 * 298.67384 * 9 8 7 31 31 H 1.08997 * 110.05925 * 177.38282 * 9 8 7 32 32 H 1.08993 * 109.46994 * 177.12452 * 11 10 9 33 33 H 1.09000 * 109.46652 * 297.12698 * 11 10 9 34 34 H 1.08993 * 109.46867 * 57.12513 * 11 10 9 35 35 H 1.09002 * 109.47096 * 302.82462 * 12 10 9 36 36 H 1.08998 * 109.46941 * 62.82174 * 12 10 9 37 37 H 1.08996 * 109.47275 * 182.82623 * 12 10 9 38 38 H 1.09003 * 109.97556 * 284.50873 * 13 10 9 39 39 H 1.09000 * 110.05613 * 163.21191 * 13 10 9 40 40 H 1.09000 * 109.47087 * 324.95893 * 14 7 6 41 41 H 1.08994 * 109.47519 * 84.96499 * 14 7 6 42 42 H 1.08001 * 126.83293 * 180.02562 * 15 3 2 43 43 H 1.08999 * 109.47358 * 240.02711 * 17 16 15 44 44 H 0.96700 * 114.00311 * 300.00591 * 18 17 16 45 45 H 0.97007 * 124.85023 * 359.96033 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 0.0005 5 8 0.6839 2.7839 0.0015 6 7 2.7849 3.5055 -0.0001 7 7 2.3796 4.8100 0.0009 8 6 2.7242 5.4675 -1.2613 9 6 1.7676 6.6491 -1.5019 10 14 1.9388 7.7958 -0.0274 11 6 0.4918 8.9672 0.0415 12 6 3.5312 8.7558 -0.1439 13 6 1.9561 6.7055 1.4988 14 6 2.8780 5.5135 1.1847 15 6 3.6882 0.6152 -0.0006 16 6 3.6096 -0.7273 -0.0004 17 6 4.7820 -1.6741 -0.0014 18 8 4.7301 -2.4977 1.1653 19 14 6.3687 -0.6978 -0.0021 20 1 7.5240 -1.6309 -0.0025 21 1 6.4226 0.1580 -1.2145 22 1 6.4241 0.1575 1.2105 23 7 2.2948 -1.0921 -0.0059 24 1 -0.3633 -0.0001 -1.0276 25 1 -0.3633 -0.8899 0.5139 26 1 -0.3634 0.8900 0.5138 27 1 3.7310 3.2915 -0.0005 28 1 3.7495 5.8342 -1.2119 29 1 2.6328 4.7534 -2.0798 30 1 0.7417 6.2885 -1.5761 31 1 2.0445 7.1741 -2.4161 32 1 0.5741 9.5944 0.9291 33 1 0.4906 9.5958 -0.8489 34 1 -0.4358 8.3965 0.0847 35 1 4.3697 8.0623 -0.2084 36 1 3.5115 9.3857 -1.0332 37 1 3.6442 9.3810 0.7418 38 1 0.9483 6.3503 1.7142 39 1 2.3447 7.2622 2.3515 40 1 2.8913 4.8308 2.0343 41 1 3.8881 5.8756 0.9938 42 1 4.5890 1.2111 -0.0004 43 1 4.7412 -2.3020 -0.8915 44 1 4.7621 -2.0047 1.9966 45 1 1.9734 -2.0074 -0.0102 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_16915442_9865296.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:05:32 Heat of formation + Delta-G solvation = -32.640860 kcal Electronic energy + Delta-G solvation = -24279.420096 eV Core-core repulsion = 20842.979848 eV Total energy + Delta-G solvation = -3436.440248 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 311.158 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.45758 -40.51393 -38.25791 -37.74426 -34.03956 -32.86487 -32.11689 -32.03563 -29.48578 -29.07159 -28.44571 -28.07916 -25.43925 -23.88931 -23.31286 -21.97552 -21.42967 -20.53537 -19.18890 -18.35411 -17.22278 -16.85541 -16.70349 -16.45605 -15.85733 -15.72808 -15.47620 -14.95276 -14.76797 -14.61233 -14.36927 -14.19882 -14.02627 -13.89267 -13.73220 -13.59543 -13.48798 -13.37863 -13.27325 -13.09843 -13.01039 -12.97097 -12.79566 -12.35623 -12.26288 -12.15162 -11.96277 -10.87395 -10.77865 -10.62727 -10.43782 -10.25005 -10.05519 -9.88400 -9.55984 -9.15813 0.83773 0.94165 1.18196 1.37277 1.43967 1.72956 1.74585 1.80905 1.89413 1.94736 2.31549 2.63103 2.74770 3.29471 3.44432 3.52742 3.86765 4.04676 4.18416 4.19640 4.32477 4.34544 4.36048 4.40603 4.51846 4.67664 4.69182 4.69542 4.71494 4.72936 4.73965 4.80222 4.81708 4.91575 4.93782 5.01007 5.24362 5.40215 5.46418 5.55148 5.57192 5.65525 5.86629 6.00567 6.35232 6.38648 6.54814 6.70308 7.83951 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.123 3.877 3 C -0.231 4.231 4 C 0.609 3.391 5 O -0.520 6.520 6 N -0.579 5.579 7 N -0.311 5.311 8 C 0.055 3.945 9 C -0.398 4.398 10 Si 0.995 3.005 11 C -0.444 4.444 12 C -0.448 4.448 13 C -0.398 4.398 14 C 0.056 3.944 15 C -0.167 4.167 16 C -0.012 4.012 17 C -0.063 4.063 18 O -0.542 6.542 19 Si 0.973 3.027 20 H -0.251 1.251 21 H -0.248 1.248 22 H -0.248 1.248 23 N -0.533 5.533 24 H 0.081 0.919 25 H 0.066 0.934 26 H 0.104 0.896 27 H 0.378 0.622 28 H 0.041 0.959 29 H 0.079 0.921 30 H 0.088 0.912 31 H 0.081 0.919 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.072 0.928 35 H 0.065 0.935 36 H 0.069 0.931 37 H 0.069 0.931 38 H 0.088 0.912 39 H 0.081 0.919 40 H 0.079 0.921 41 H 0.042 0.958 42 H 0.143 0.857 43 H 0.118 0.882 44 H 0.380 0.620 45 H 0.420 0.580 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.192 -0.515 0.067 3.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.004 3.996 3 C -0.242 4.242 4 C 0.398 3.602 5 O -0.395 6.395 6 N -0.323 5.323 7 N -0.129 5.129 8 C -0.072 4.072 9 C -0.484 4.484 10 Si 1.191 2.809 11 C -0.552 4.552 12 C -0.555 4.555 13 C -0.484 4.484 14 C -0.071 4.071 15 C -0.192 4.192 16 C -0.122 4.122 17 C -0.173 4.173 18 O -0.348 6.348 19 Si 0.793 3.207 20 H -0.175 1.175 21 H -0.171 1.171 22 H -0.171 1.171 23 N -0.129 5.129 24 H 0.100 0.900 25 H 0.085 0.915 26 H 0.123 0.877 27 H 0.216 0.784 28 H 0.059 0.941 29 H 0.097 0.903 30 H 0.107 0.893 31 H 0.100 0.900 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.091 0.909 35 H 0.084 0.916 36 H 0.089 0.911 37 H 0.089 0.911 38 H 0.107 0.893 39 H 0.100 0.900 40 H 0.098 0.902 41 H 0.060 0.940 42 H 0.161 0.839 43 H 0.136 0.864 44 H 0.228 0.772 45 H 0.258 0.742 Dipole moment (debyes) X Y Z Total from point charges 2.600 -0.485 -0.351 2.668 hybrid contribution 0.904 -0.316 0.262 0.993 sum 3.504 -0.801 -0.089 3.595 Atomic orbital electron populations 1.20654 0.86503 1.04615 1.03885 1.20409 0.93854 0.85259 1.00086 1.19886 0.92622 0.91761 1.19958 1.17103 0.85087 0.82676 0.75335 1.90741 1.16181 1.83779 1.48768 1.45014 1.08247 1.00792 1.78233 1.61445 1.58111 0.90721 1.02590 1.22241 0.97178 0.96829 0.90924 1.26235 1.02861 1.05614 1.13738 0.79623 0.67279 0.66558 0.67470 1.26024 1.14212 1.10639 1.04346 1.26128 1.16145 1.08634 1.04596 1.26242 1.02956 1.04883 1.14355 1.22222 0.96368 0.96301 0.92253 1.21751 0.96175 0.92742 1.08540 1.20722 0.85218 0.94663 1.11625 1.24803 1.02634 0.97961 0.91896 1.86509 1.96930 1.35765 1.15553 0.85350 0.74822 0.78447 0.82118 1.17487 1.17104 1.17150 1.41545 1.05336 1.08840 1.57190 0.90040 0.91491 0.87712 0.78351 0.94116 0.90286 0.89288 0.90042 0.91265 0.91271 0.90931 0.91579 0.91146 0.91148 0.89306 0.90001 0.90214 0.94022 0.83927 0.86385 0.77229 0.74205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.04 9.88 36.01 0.36 0.31 16 2 C 0.12 0.16 7.17 -81.89 -0.59 -0.42 16 3 C -0.23 -0.55 6.29 -103.35 -0.65 -1.20 16 4 C 0.61 2.53 7.91 -12.59 -0.10 2.43 16 5 O -0.52 -3.83 15.14 5.26 0.08 -3.75 16 6 N -0.58 -1.12 4.63 30.39 0.14 -0.97 16 7 N -0.31 -0.63 4.00 -113.40 -0.45 -1.08 16 8 C 0.06 0.04 5.61 -3.59 -0.02 0.02 16 9 C -0.40 0.02 5.24 37.64 0.20 0.22 16 10 Si 0.99 -1.64 11.76 -169.99 -2.00 -3.63 16 11 C -0.44 0.27 8.65 101.05 0.87 1.14 16 12 C -0.45 0.62 8.65 101.05 0.87 1.49 16 13 C -0.40 0.10 5.24 37.64 0.20 0.29 16 14 C 0.06 0.03 5.61 -3.59 -0.02 0.01 16 15 C -0.17 -0.05 9.03 -37.50 -0.34 -0.39 16 16 C -0.01 0.01 6.48 -81.87 -0.53 -0.53 16 17 C -0.06 0.12 3.08 36.00 0.11 0.23 16 18 O -0.54 0.66 12.88 -35.23 -0.45 0.20 16 19 Si 0.97 -2.01 25.84 -169.99 -4.39 -6.41 16 20 H -0.25 0.15 7.11 56.52 0.40 0.55 16 21 H -0.25 0.37 7.11 56.52 0.40 0.77 16 22 H -0.25 0.46 7.11 56.52 0.40 0.86 16 23 N -0.53 0.28 5.90 -5.43 -0.03 0.24 16 24 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 26 H 0.10 0.26 6.46 -51.93 -0.34 -0.08 16 27 H 0.38 -0.21 7.95 -185.15 -1.47 -1.68 16 28 H 0.04 -0.04 7.58 -51.93 -0.39 -0.43 16 29 H 0.08 0.13 8.04 -51.93 -0.42 -0.29 16 30 H 0.09 0.13 7.99 -51.93 -0.42 -0.29 16 31 H 0.08 -0.09 7.99 -51.93 -0.42 -0.51 16 32 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 33 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 34 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 35 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 36 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 37 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 38 H 0.09 0.10 7.99 -51.93 -0.42 -0.31 16 39 H 0.08 -0.11 8.00 -51.93 -0.42 -0.52 16 40 H 0.08 0.09 8.04 -51.93 -0.42 -0.33 16 41 H 0.04 -0.05 7.58 -51.93 -0.39 -0.44 16 42 H 0.14 -0.24 5.86 -52.49 -0.31 -0.55 16 43 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 44 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 45 H 0.42 -1.09 8.96 -40.82 -0.37 -1.46 16 LS Contribution 363.48 15.07 5.48 5.48 Total: 0.00 -7.52 363.48 -9.17 -16.70 By element: Atomic # 1 Polarization: -2.48 SS G_CDS: -7.90 Total: -10.38 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: 0.36 Total: 3.61 kcal Atomic # 7 Polarization: -1.47 SS G_CDS: -0.35 Total: -1.81 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -0.37 Total: -3.55 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: -6.39 Total: -10.04 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -7.52 -9.17 -16.70 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16915442_9865296.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.943 kcal (2) G-P(sol) polarization free energy of solvation -7.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.174 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds