Wall clock time and date at job start Thu Mar 4 2021 14:24:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 N 1.28464 * 124.89011 * 2 1 4 4 C 1.31802 * 110.07543 * 180.02562 * 3 2 1 5 5 C 1.47711 * 126.51872 * 179.97438 * 4 3 2 6 6 O 1.21566 * 120.00148 * 180.02562 * 5 4 3 7 7 N 1.34776 * 119.99932 * 0.02693 * 5 4 3 8 8 C 1.46502 * 120.00105 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47303 * 179.97438 * 8 7 5 10 10 F 1.39905 * 109.47057 * 304.99774 * 9 8 7 11 11 C 1.52997 * 109.47232 * 64.99845 * 9 8 7 12 12 C 1.52996 * 109.47131 * 59.99874 * 11 9 8 13 13 C 1.53002 * 109.46972 * 60.00459 * 12 11 9 14 14 H 1.08996 * 109.47407 * 59.99513 * 13 12 11 15 15 C 1.52996 * 109.46972 * 179.97438 * 13 12 11 16 16 O 1.42902 * 109.47239 * 294.99618 * 15 13 12 17 17 C 1.52997 * 109.46817 * 299.99733 * 13 12 11 18 18 C 1.52999 * 109.47592 * 185.00040 * 9 8 7 19 19 C 1.41503 * 106.96410 * 0.22449 * 4 3 2 20 20 C 1.35032 * 124.87972 * 180.02562 * 2 1 3 21 21 C 1.50702 * 126.38979 * 0.02840 * 20 2 1 22 22 O 1.42905 * 109.46598 * 30.00586 * 21 20 2 23 23 Si 1.86301 * 109.47367 * 150.00011 * 21 20 2 24 24 H 1.09006 * 109.47531 * 89.97254 * 1 2 3 25 25 H 1.08998 * 109.47737 * 209.97350 * 1 2 3 26 26 H 1.09003 * 109.47405 * 329.97892 * 1 2 3 27 27 H 0.97000 * 120.00222 * 359.97438 * 7 5 4 28 28 H 1.09001 * 109.47198 * 59.99534 * 8 7 5 29 29 H 1.09000 * 109.47116 * 299.99394 * 8 7 5 30 30 H 1.09001 * 109.47289 * 299.99925 * 11 9 8 31 31 H 1.09000 * 109.47611 * 180.02562 * 11 9 8 32 32 H 1.08996 * 109.47452 * 300.00000 * 12 11 9 33 33 H 1.09000 * 109.47054 * 180.02562 * 12 11 9 34 34 H 1.09000 * 109.47315 * 54.99972 * 15 13 12 35 35 H 1.09007 * 109.46739 * 174.99590 * 15 13 12 36 36 H 0.96703 * 113.99863 * 180.02562 * 16 15 13 37 37 H 1.09001 * 109.47502 * 300.00518 * 17 13 12 38 38 H 1.09001 * 109.47289 * 180.02562 * 17 13 12 39 39 H 1.08993 * 109.47839 * 180.02562 * 18 9 8 40 40 H 1.09000 * 109.47160 * 59.99666 * 18 9 8 41 41 H 1.07999 * 127.24682 * 179.75837 * 19 4 3 42 42 H 1.09001 * 109.47590 * 270.00724 * 21 20 2 43 43 H 0.96702 * 113.99623 * 180.02562 * 22 21 20 44 44 H 1.48502 * 110.00140 * 300.00887 * 23 21 20 45 45 H 1.48509 * 109.99749 * 61.32223 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0537 0.0000 4 6 3.4740 0.7167 -0.0006 5 6 4.6273 1.6396 -0.0013 6 8 5.7597 1.1974 -0.0022 7 7 4.4242 2.9720 -0.0009 8 6 5.5681 3.8873 -0.0021 9 6 5.0650 5.3322 -0.0020 10 9 4.1962 5.5237 -1.0817 11 6 4.3228 5.6137 1.3059 12 6 5.2729 5.4044 2.4867 13 6 6.4622 6.3585 2.3597 14 1 6.1038 7.3879 2.3598 15 6 7.4120 6.1496 3.5409 16 8 6.7544 6.5244 4.7530 17 6 7.2044 6.0770 1.0518 18 6 6.2542 6.2864 -0.1291 19 6 3.5271 -0.6973 -0.0062 20 6 2.2372 -1.1077 -0.0005 21 6 1.7532 -2.5350 -0.0017 22 8 0.4956 -2.6108 -0.6761 23 14 2.9947 -3.6110 -0.8802 24 1 -0.3634 0.0005 -1.0277 25 1 -0.3634 -0.8902 0.5134 26 1 -0.3634 0.8898 0.5142 27 1 3.5207 3.3249 -0.0005 28 1 6.1718 3.7132 -0.8928 29 1 6.1738 3.7131 0.8871 30 1 3.4755 4.9341 1.3965 31 1 3.9640 6.6430 1.3059 32 1 5.6313 4.3750 2.4867 33 1 4.7440 5.6045 3.4186 34 1 7.7007 5.0999 3.5937 35 1 8.3016 6.7647 3.4049 36 1 7.2990 6.4181 5.5450 37 1 7.5628 5.0476 1.0516 38 1 8.0520 6.7565 0.9615 39 1 5.8960 7.3158 -0.1285 40 1 6.7830 6.0859 -1.0609 41 1 4.4107 -1.3182 -0.0118 42 1 1.6360 -2.8798 1.0256 43 1 0.1232 -3.5024 -0.7148 44 1 3.1636 -3.1510 -2.2821 45 1 4.2984 -3.5657 -0.1704 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16921692_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:24:39 Heat of formation + Delta-G solvation = -97.387120 kcal Electronic energy + Delta-G solvation = -29024.265183 eV Core-core repulsion = 24766.012643 eV Total energy + Delta-G solvation = -4258.252540 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.163 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -48.90225 -43.99994 -40.94148 -39.92068 -37.90297 -37.49813 -35.78186 -34.56548 -33.00341 -32.32360 -32.03771 -29.19899 -27.82360 -26.68056 -25.74817 -24.34482 -23.82986 -22.32596 -22.08581 -21.03384 -20.24772 -18.74254 -18.41280 -18.22735 -17.89591 -17.74783 -17.52503 -17.25779 -16.37900 -16.31085 -15.97070 -15.90780 -15.81437 -15.51215 -15.32518 -15.07271 -14.82775 -14.53352 -14.27189 -14.16113 -13.99273 -13.81464 -13.60064 -13.47593 -13.33648 -13.07322 -13.02485 -12.63734 -12.30046 -12.21345 -12.16961 -12.11161 -11.62628 -11.55704 -11.33364 -11.14243 -10.96208 -10.84546 -10.50643 -10.21705 -9.97327 -5.03352 0.24871 0.63569 1.16573 1.48920 1.66435 1.87088 2.03608 2.09116 3.00724 3.07043 3.13031 3.21539 3.27943 3.36898 3.50386 3.58025 3.79456 3.86764 3.95072 4.16449 4.19714 4.24344 4.28573 4.31569 4.32547 4.38241 4.39027 4.42893 4.46004 4.47036 4.59226 4.65844 4.67116 4.73261 4.87455 4.93035 4.98172 4.99778 5.04184 5.09287 5.10740 5.27255 5.38981 5.54031 6.11435 6.62004 6.82702 6.86408 6.86889 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.257 5.257 3 N -0.263 5.263 4 C -0.038 4.038 5 C 0.606 3.394 6 O -0.565 6.565 7 N -0.704 5.704 8 C 0.096 3.904 9 C 0.114 3.886 10 F -0.216 7.216 11 C -0.136 4.136 12 C -0.105 4.105 13 C -0.089 4.089 14 H 0.078 0.922 15 C 0.076 3.924 16 O -0.595 6.595 17 C -0.112 4.112 18 C -0.131 4.131 19 C -0.215 4.215 20 C 0.030 3.970 21 C -0.044 4.044 22 O -0.558 6.558 23 Si 0.811 3.189 24 H 0.094 0.906 25 H 0.126 0.874 26 H 0.102 0.898 27 H 0.413 0.587 28 H 0.075 0.925 29 H 0.100 0.900 30 H 0.072 0.928 31 H 0.085 0.915 32 H 0.062 0.938 33 H 0.070 0.930 34 H 0.049 0.951 35 H 0.059 0.941 36 H 0.396 0.604 37 H 0.073 0.927 38 H 0.091 0.909 39 H 0.089 0.911 40 H 0.086 0.914 41 H 0.157 0.843 42 H 0.120 0.880 43 H 0.416 0.584 44 H -0.312 1.312 45 H -0.292 1.292 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.042 -3.937 3.092 6.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.046 5.046 3 N -0.101 5.101 4 C -0.196 4.196 5 C 0.391 3.609 6 O -0.442 6.442 7 N -0.356 5.356 8 C -0.027 4.027 9 C 0.096 3.904 10 F -0.197 7.197 11 C -0.173 4.173 12 C -0.143 4.143 13 C -0.108 4.108 14 H 0.096 0.904 15 C -0.001 4.001 16 O -0.403 6.403 17 C -0.149 4.149 18 C -0.169 4.169 19 C -0.243 4.243 20 C -0.096 4.096 21 C -0.154 4.154 22 O -0.370 6.370 23 Si 0.717 3.283 24 H 0.112 0.888 25 H 0.145 0.855 26 H 0.121 0.879 27 H 0.250 0.750 28 H 0.094 0.906 29 H 0.118 0.882 30 H 0.090 0.910 31 H 0.104 0.896 32 H 0.080 0.920 33 H 0.088 0.912 34 H 0.068 0.932 35 H 0.078 0.922 36 H 0.245 0.755 37 H 0.092 0.908 38 H 0.110 0.890 39 H 0.108 0.892 40 H 0.105 0.895 41 H 0.175 0.825 42 H 0.137 0.863 43 H 0.269 0.731 44 H -0.241 1.241 45 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -3.758 -2.571 2.180 5.049 hybrid contribution 0.568 0.051 0.326 0.656 sum -3.191 -2.521 2.506 4.777 Atomic orbital electron populations 1.22611 0.69899 1.06874 1.05898 1.45805 1.09432 1.01531 1.47814 1.73468 1.02459 1.14850 1.19326 1.21718 0.91191 0.93952 1.12737 1.16948 0.86356 0.81881 0.75690 1.90776 1.23707 1.77741 1.52018 1.45654 1.11229 1.04749 1.73921 1.22222 0.88816 0.87243 1.04423 1.21273 0.90113 0.94511 0.84527 1.92867 1.72231 1.96299 1.58294 1.22093 0.98750 1.03810 0.92681 1.21486 0.95933 0.99446 0.97404 1.21203 0.95394 1.00528 0.93670 0.90391 1.22271 0.94591 0.99045 0.84211 1.86421 1.46049 1.89973 1.17845 1.21550 0.98107 1.03447 0.91829 1.22048 0.94673 0.99620 1.00562 1.21520 0.97173 0.93993 1.11659 1.21485 0.90253 0.91322 1.06510 1.24393 0.95435 0.91509 1.04074 1.86357 1.33843 1.37841 1.78950 0.94606 0.75401 0.83627 0.74656 0.88796 0.85542 0.87944 0.74959 0.90649 0.88247 0.90958 0.89649 0.91956 0.91157 0.93239 0.92242 0.75474 0.90837 0.89018 0.89227 0.89522 0.82545 0.86257 0.73053 1.24088 1.21954 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.29 10.12 127.77 1.29 1.01 16 2 N -0.26 -1.39 3.70 -355.93 -1.32 -2.71 16 3 N -0.26 -2.58 11.67 -48.18 -0.56 -3.14 16 4 C -0.04 -0.49 7.13 42.46 0.30 -0.19 16 5 C 0.61 8.34 7.82 86.75 0.68 9.02 16 6 O -0.56 -10.94 16.93 -3.93 -0.07 -11.00 16 7 N -0.70 -5.61 5.17 -466.10 -2.41 -8.02 16 8 C 0.10 0.45 4.14 86.38 0.36 0.80 16 9 C 0.11 0.22 1.07 -10.80 -0.01 0.20 16 10 F -0.22 -1.46 16.46 44.97 0.74 -0.72 16 11 C -0.14 -0.10 5.06 30.59 0.15 0.05 16 12 C -0.11 -0.07 4.83 30.59 0.15 0.08 16 13 C -0.09 0.12 2.43 -10.79 -0.03 0.09 16 14 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 15 C 0.08 -0.13 6.43 71.98 0.46 0.34 16 16 O -0.59 -0.63 13.20 -148.98 -1.97 -2.60 16 17 C -0.11 0.39 4.93 30.60 0.15 0.54 16 18 C -0.13 0.22 5.19 30.60 0.16 0.38 16 19 C -0.22 -2.36 9.35 22.41 0.21 -2.15 16 20 C 0.03 0.16 6.22 41.40 0.26 0.42 16 21 C -0.04 0.19 2.87 71.24 0.20 0.39 16 22 O -0.56 4.43 10.38 -148.98 -1.55 2.88 16 23 Si 0.81 -2.50 31.30 68.60 2.15 -0.35 16 24 H 0.09 -0.38 8.14 -2.38 -0.02 -0.40 16 25 H 0.13 -0.96 6.77 -2.39 -0.02 -0.98 16 26 H 0.10 -0.56 8.14 -2.39 -0.02 -0.57 16 27 H 0.41 2.59 7.18 -92.71 -0.67 1.93 16 28 H 0.08 0.46 8.14 -2.39 -0.02 0.44 16 29 H 0.10 0.37 4.83 -2.39 -0.01 0.36 16 30 H 0.07 0.10 7.18 -2.39 -0.02 0.09 16 31 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 32 H 0.06 0.11 6.32 -2.39 -0.02 0.10 16 33 H 0.07 0.21 7.82 -2.39 -0.02 0.19 16 34 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.06 -0.24 8.14 -2.38 -0.02 -0.26 16 36 H 0.40 -2.69 9.12 -74.06 -0.68 -3.37 16 37 H 0.07 -0.23 6.54 -2.39 -0.02 -0.25 16 38 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 39 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 40 H 0.09 -0.19 8.14 -2.39 -0.02 -0.21 16 41 H 0.16 1.75 6.90 -2.91 -0.02 1.73 16 42 H 0.12 -1.19 7.96 -2.39 -0.02 -1.21 16 43 H 0.42 -7.76 8.74 -74.06 -0.65 -8.41 16 44 H -0.31 -2.26 7.11 99.48 0.71 -1.55 16 45 H -0.29 -1.12 6.94 99.48 0.69 -0.43 16 Total: 0.00 -26.87 361.21 -1.56 -28.42 By element: Atomic # 1 Polarization: -12.83 SS G_CDS: -0.92 Total: -13.75 kcal Atomic # 6 Polarization: 6.65 SS G_CDS: 4.34 Total: 10.99 kcal Atomic # 7 Polarization: -9.58 SS G_CDS: -4.29 Total: -13.87 kcal Atomic # 8 Polarization: -7.14 SS G_CDS: -3.58 Total: -10.72 kcal Atomic # 9 Polarization: -1.46 SS G_CDS: 0.74 Total: -0.72 kcal Atomic # 14 Polarization: -2.50 SS G_CDS: 2.15 Total: -0.35 kcal Total: -26.87 -1.56 -28.42 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16921692_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.963 kcal (2) G-P(sol) polarization free energy of solvation -26.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.557 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.425 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds