Wall clock time and date at job start Thu Mar 4 2021 17:59:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.34809 * 125.89883 * 2 1 4 4 C 1.40989 * 107.48447 * 180.25531 * 3 2 1 5 5 C 1.50697 * 126.25842 * 179.76806 * 4 3 2 6 6 O 1.42902 * 109.47359 * 104.95612 * 5 4 3 7 7 Si 1.86298 * 109.46970 * 344.95185 * 5 4 3 8 8 C 1.34809 * 107.48844 * 359.72807 * 4 3 2 9 9 C 1.50691 * 125.90651 * 179.97438 * 8 4 3 10 10 N 1.36652 * 125.90578 * 179.79259 * 2 1 3 11 11 C 1.39668 * 125.67863 * 0.02562 * 10 2 1 12 12 C 1.40202 * 120.15405 * 89.69244 * 11 10 2 13 13 C 1.47567 * 120.19361 * 0.02562 * 12 11 10 14 14 O 1.21589 * 120.00329 * 0.02562 * 13 12 11 15 15 N 1.34772 * 120.00333 * 180.02562 * 13 12 11 16 16 C 1.46497 * 120.00344 * 179.97438 * 15 13 12 17 17 H 1.08995 * 112.84982 * 334.66666 * 16 15 13 18 18 C 1.53781 * 113.61767 * 105.86279 * 16 15 13 19 19 C 1.54051 * 86.98772 * 89.16080 * 18 16 15 20 20 O 1.42903 * 113.68922 * 270.87836 * 19 18 16 21 21 C 1.52996 * 113.62003 * 139.97942 * 19 18 16 22 22 F 1.39897 * 109.47402 * 322.50835 * 21 19 18 23 23 F 1.39904 * 109.47211 * 82.50994 * 21 19 18 24 24 F 1.39901 * 109.47098 * 202.50286 * 21 19 18 25 25 C 1.53782 * 113.61415 * 203.47218 * 16 15 13 26 26 C 1.39653 * 119.61215 * 180.02562 * 12 11 10 27 27 C 1.37835 * 119.91916 * 0.02562 * 26 12 11 28 28 C 1.38529 * 120.30825 * 0.02562 * 27 26 12 29 29 C 1.38067 * 120.39677 * 359.97438 * 28 27 26 30 30 H 1.08998 * 109.47055 * 270.20175 * 1 2 3 31 31 H 1.08996 * 109.47524 * 30.20697 * 1 2 3 32 32 H 1.08998 * 109.46466 * 150.20576 * 1 2 3 33 33 H 1.08000 * 126.25817 * 359.95883 * 3 2 1 34 34 H 1.09001 * 109.46982 * 224.95512 * 5 4 3 35 35 H 0.96702 * 113.99727 * 299.99958 * 6 5 4 36 36 H 1.48505 * 109.99923 * 58.68593 * 7 5 4 37 37 H 1.48506 * 110.00079 * 180.02562 * 7 5 4 38 38 H 1.08998 * 109.47748 * 270.02637 * 9 8 4 39 39 H 1.09005 * 109.47423 * 30.03016 * 9 8 4 40 40 H 1.09000 * 109.47346 * 150.02323 * 9 8 4 41 41 H 0.97001 * 119.99941 * 359.97438 * 15 13 12 42 42 H 1.08994 * 113.61814 * 203.66324 * 18 16 15 43 43 H 1.09006 * 113.60772 * 334.56862 * 18 16 15 44 44 H 0.96698 * 114.00170 * 277.52655 * 20 19 18 45 45 H 1.09001 * 113.62038 * 25.42829 * 25 16 15 46 46 H 1.08997 * 113.61563 * 156.33599 * 25 16 15 47 47 H 1.08002 * 120.04316 * 180.02562 * 26 12 11 48 48 H 1.08000 * 119.84039 * 179.72280 * 27 26 12 49 49 H 1.08009 * 119.80190 * 179.97438 * 28 27 26 50 50 H 1.07996 * 119.96471 * 180.02562 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2975 1.0920 0.0000 4 6 3.6352 0.6467 -0.0060 5 6 4.8646 1.5181 -0.0131 6 8 5.4607 1.5115 1.2857 7 14 4.3882 3.2605 -0.4689 8 6 3.6134 -0.7012 -0.0033 9 6 4.8195 -1.6046 -0.0083 10 7 2.3084 -1.1068 0.0040 11 6 1.8672 -2.4320 0.0083 12 6 1.6390 -3.1022 -1.2018 13 6 1.8641 -2.4118 -2.4865 14 8 2.2491 -1.2586 -2.4977 15 7 1.6430 -3.0596 -3.6475 16 6 1.8660 -2.3741 -4.9228 17 1 1.7744 -1.2909 -4.8428 18 6 3.1387 -2.8323 -5.6543 19 6 2.2669 -3.9106 -6.3254 20 8 2.1922 -5.1309 -5.5855 21 6 2.5943 -4.1311 -7.8036 22 9 2.9009 -2.9041 -8.4014 23 9 3.6921 -4.9913 -7.9148 24 9 1.4894 -4.7000 -8.4461 25 6 1.0689 -2.9748 -6.0927 26 6 1.1974 -4.4270 -1.1843 27 6 0.9885 -5.0662 0.0188 28 6 1.2140 -4.4004 1.2126 29 6 1.6507 -3.0906 1.2103 30 1 -0.3633 0.0036 1.0276 31 1 -0.3634 0.8881 -0.5170 32 1 -0.3632 -0.8918 -0.5106 33 1 1.9666 2.1201 -0.0006 34 1 5.5780 1.1339 -0.7422 35 1 4.8812 1.8413 1.9860 36 1 3.3917 3.7844 0.4996 37 1 5.5921 4.1299 -0.4800 38 1 5.1050 -1.8240 -1.0371 39 1 5.6466 -1.1093 0.5005 40 1 4.5796 -2.5340 0.5082 41 1 1.3363 -3.9798 -3.6386 42 1 3.5318 -2.0925 -6.3516 43 1 3.9022 -3.2372 -4.9900 44 1 2.9429 -5.7237 -5.7276 45 1 0.1626 -3.4948 -5.7823 46 1 0.8972 -2.2740 -6.9096 47 1 1.0198 -4.9500 -2.1124 48 1 0.6426 -6.0892 0.0309 49 1 1.0472 -4.9091 2.1507 50 1 1.8247 -2.5784 2.1450 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_12335856.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:59:21 Heat of formation + Delta-G solvation = -138.918947 kcal Electronic energy + Delta-G solvation = -41521.813454 eV Core-core repulsion = 35875.373357 eV Total energy + Delta-G solvation = -5646.440097 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.149 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -51.23811 -48.78505 -48.71739 -42.85747 -41.58599 -40.34540 -39.10803 -37.80823 -36.43323 -34.54005 -34.02301 -33.56668 -32.16082 -30.42140 -30.09791 -28.76368 -27.22191 -27.17038 -25.42297 -24.57036 -24.02925 -23.40243 -22.03051 -21.08729 -20.86218 -20.32473 -20.03392 -19.53501 -19.40801 -18.80430 -17.86707 -17.54879 -17.37314 -17.09375 -16.67298 -16.33162 -16.16530 -15.96303 -15.87806 -15.73367 -15.59059 -15.42391 -15.32177 -15.16185 -14.95678 -14.89917 -14.88670 -14.74754 -14.66449 -14.55359 -14.28818 -14.13677 -14.04977 -13.85815 -13.76678 -13.46252 -13.33922 -13.25276 -13.07834 -12.94298 -12.89122 -12.73445 -12.62053 -12.36418 -12.14285 -11.91116 -11.65442 -11.22647 -11.00597 -10.47132 -10.30108 -10.12193 -10.00743 -9.52584 -8.65550 -4.83437 -0.40598 0.05095 1.23212 1.43904 1.51692 1.67331 1.75493 1.87307 1.90690 1.95546 2.04926 2.42594 2.58133 2.60902 2.66054 2.85952 3.39605 3.44709 3.53861 3.59025 3.62138 3.64520 3.78945 3.96925 4.06572 4.17761 4.20704 4.24618 4.24760 4.35120 4.42972 4.46967 4.47683 4.50771 4.61173 4.66716 4.69170 4.70102 4.71856 4.75600 4.76280 4.77814 4.96979 5.00807 5.06640 5.19216 5.24109 5.29759 5.43383 5.46213 5.64050 6.13373 6.23802 6.28012 6.46281 6.59492 6.65278 7.14892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.034 3.966 3 C -0.206 4.206 4 C -0.203 4.203 5 C -0.044 4.044 6 O -0.552 6.552 7 Si 0.767 3.233 8 C 0.056 3.944 9 C -0.077 4.077 10 N -0.391 5.391 11 C 0.145 3.855 12 C -0.143 4.143 13 C 0.549 3.451 14 O -0.537 6.537 15 N -0.693 5.693 16 C 0.134 3.866 17 H 0.107 0.893 18 C -0.164 4.164 19 C 0.072 3.928 20 O -0.516 6.516 21 C 0.432 3.568 22 F -0.178 7.178 23 F -0.187 7.187 24 F -0.184 7.184 25 C -0.119 4.119 26 C -0.074 4.074 27 C -0.107 4.107 28 C -0.077 4.077 29 C -0.124 4.124 30 H 0.077 0.923 31 H 0.087 0.913 32 H 0.054 0.946 33 H 0.141 0.859 34 H 0.104 0.896 35 H 0.382 0.618 36 H -0.284 1.284 37 H -0.301 1.301 38 H 0.065 0.935 39 H 0.081 0.919 40 H 0.062 0.938 41 H 0.414 0.586 42 H 0.119 0.881 43 H 0.090 0.910 44 H 0.405 0.595 45 H 0.107 0.893 46 H 0.132 0.868 47 H 0.158 0.842 48 H 0.168 0.832 49 H 0.162 0.838 50 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.796 -7.105 -0.284 8.577 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.075 4.075 3 C -0.230 4.230 4 C -0.209 4.209 5 C -0.154 4.154 6 O -0.359 6.359 7 Si 0.673 3.327 8 C -0.055 4.055 9 C -0.134 4.134 10 N -0.065 5.065 11 C 0.055 3.945 12 C -0.147 4.147 13 C 0.336 3.664 14 O -0.414 6.414 15 N -0.347 5.347 16 C 0.029 3.971 17 H 0.125 0.875 18 C -0.203 4.203 19 C 0.028 3.972 20 O -0.325 6.325 21 C 0.377 3.623 22 F -0.159 7.159 23 F -0.169 7.169 24 F -0.165 7.165 25 C -0.157 4.157 26 C -0.093 4.093 27 C -0.125 4.125 28 C -0.096 4.096 29 C -0.143 4.143 30 H 0.096 0.904 31 H 0.106 0.894 32 H 0.073 0.927 33 H 0.159 0.841 34 H 0.122 0.878 35 H 0.230 0.770 36 H -0.210 1.210 37 H -0.229 1.229 38 H 0.083 0.917 39 H 0.100 0.900 40 H 0.081 0.919 41 H 0.253 0.747 42 H 0.137 0.863 43 H 0.109 0.891 44 H 0.258 0.742 45 H 0.126 0.874 46 H 0.150 0.850 47 H 0.176 0.824 48 H 0.185 0.815 49 H 0.180 0.820 50 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -4.702 -5.772 -0.225 7.448 hybrid contribution 0.689 -0.887 0.484 1.223 sum -4.013 -6.659 0.258 7.779 Atomic orbital electron populations 1.20277 0.87250 1.03138 1.02779 1.20468 0.93853 0.84950 1.08211 1.20593 0.92216 0.97754 1.12408 1.19478 0.94676 0.92798 1.13996 1.24376 0.94500 1.09539 0.86954 1.86508 1.44550 1.87274 1.17610 0.93723 0.77231 0.72137 0.89624 1.20214 0.84159 0.93994 1.07091 1.20226 0.93624 0.97458 1.02091 1.41026 1.05287 1.02888 1.57289 1.17787 0.99809 0.83563 0.93325 1.20206 1.06146 0.96248 0.92066 1.18340 0.77702 0.86118 0.84260 1.90914 1.45361 1.17498 1.87605 1.45472 1.68249 1.17160 1.03827 1.21531 0.94899 0.98334 0.82383 0.87471 1.24261 0.98198 0.97598 1.00217 1.23653 1.02311 0.88001 0.83217 1.86482 1.51044 1.28609 1.66385 1.21517 0.74256 0.73930 0.92591 1.93188 1.93069 1.43782 1.85902 1.93181 1.55585 1.71181 1.96917 1.93211 1.53658 1.85230 1.84441 1.23572 0.96584 0.96340 0.99161 1.21609 0.95449 0.91507 1.00719 1.21671 0.97819 1.01902 0.91091 1.21668 0.94622 0.92668 1.00606 1.21448 1.00147 0.96258 0.96483 0.90432 0.89440 0.92659 0.84095 0.87802 0.76989 1.20987 1.22935 0.91663 0.90016 0.91941 0.74682 0.86276 0.89108 0.74199 0.87449 0.84973 0.82427 0.81468 0.82047 0.84973 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.23 10.09 71.24 0.72 0.49 16 2 C 0.03 0.27 5.98 41.02 0.25 0.52 16 3 C -0.21 -1.82 9.27 22.16 0.21 -1.62 16 4 C -0.20 -1.89 5.35 -19.98 -0.11 -2.00 16 5 C -0.04 -0.33 2.49 71.23 0.18 -0.15 16 6 O -0.55 -4.84 12.88 -148.98 -1.92 -6.76 16 7 Si 0.77 4.14 30.86 68.60 2.12 6.25 16 8 C 0.06 0.51 6.00 41.02 0.25 0.76 16 9 C -0.08 -0.48 9.87 71.23 0.70 0.23 16 10 N -0.39 -2.92 1.45 -319.53 -0.46 -3.38 16 11 C 0.15 0.48 4.52 38.50 0.17 0.66 16 12 C -0.14 -0.09 5.89 -20.00 -0.12 -0.21 16 13 C 0.55 1.74 7.77 86.71 0.67 2.41 16 14 O -0.54 -5.54 13.29 -4.00 -0.05 -5.60 16 15 N -0.69 2.17 5.09 -443.18 -2.26 -0.09 16 16 C 0.13 -0.50 4.29 45.52 0.20 -0.30 16 17 H 0.11 -0.06 7.50 -2.39 -0.02 -0.08 16 18 C -0.16 0.81 7.17 31.21 0.22 1.03 16 19 C 0.07 -0.42 1.36 -10.17 -0.01 -0.43 16 20 O -0.52 4.06 12.17 -148.98 -1.81 2.25 16 21 C 0.43 -0.83 2.85 71.98 0.21 -0.62 16 22 F -0.18 0.06 15.76 44.97 0.71 0.77 16 23 F -0.19 0.11 16.65 44.97 0.75 0.86 16 24 F -0.18 -0.19 17.18 44.97 0.77 0.58 16 25 C -0.12 0.81 7.01 31.12 0.22 1.03 16 26 C -0.07 0.46 9.53 22.52 0.21 0.67 16 27 C -0.11 0.91 10.02 22.24 0.22 1.13 16 28 C -0.08 0.50 10.03 22.30 0.22 0.72 16 29 C -0.12 0.10 9.96 22.35 0.22 0.32 16 30 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 31 H 0.09 0.11 8.14 -2.39 -0.02 0.09 16 32 H 0.05 0.18 7.83 -2.39 -0.02 0.16 16 33 H 0.14 0.93 6.52 -2.91 -0.02 0.91 16 34 H 0.10 0.74 7.96 -2.39 -0.02 0.72 16 35 H 0.38 1.41 8.70 -74.06 -0.64 0.77 16 36 H -0.28 -2.48 7.01 99.48 0.70 -1.78 16 37 H -0.30 -3.40 7.11 99.48 0.71 -2.70 16 38 H 0.06 0.41 8.14 -2.39 -0.02 0.39 16 39 H 0.08 0.54 7.87 -2.38 -0.02 0.52 16 40 H 0.06 0.29 7.83 -2.39 -0.02 0.27 16 41 H 0.41 -2.90 5.66 -92.71 -0.53 -3.43 16 42 H 0.12 -0.64 7.14 -2.39 -0.02 -0.66 16 43 H 0.09 -0.35 8.14 -2.38 -0.02 -0.37 16 44 H 0.41 -5.08 8.42 -74.06 -0.62 -5.70 16 45 H 0.11 -0.83 8.14 -2.39 -0.02 -0.85 16 46 H 0.13 -1.13 7.88 -2.39 -0.02 -1.15 16 47 H 0.16 -1.80 6.40 -2.91 -0.02 -1.82 16 48 H 0.17 -2.38 8.06 -2.91 -0.02 -2.40 16 49 H 0.16 -1.84 8.06 -2.91 -0.02 -1.87 16 50 H 0.13 -0.09 8.06 -2.91 -0.02 -0.12 16 Total: 0.00 -21.28 423.54 1.75 -19.54 By element: Atomic # 1 Polarization: -18.32 SS G_CDS: -0.72 Total: -19.05 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: 4.63 Total: 4.63 kcal Atomic # 7 Polarization: -0.75 SS G_CDS: -2.72 Total: -3.47 kcal Atomic # 8 Polarization: -6.33 SS G_CDS: -3.79 Total: -10.11 kcal Atomic # 9 Polarization: -0.01 SS G_CDS: 2.23 Total: 2.22 kcal Atomic # 14 Polarization: 4.14 SS G_CDS: 2.12 Total: 6.25 kcal Total: -21.28 1.75 -19.54 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_12335856.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.384 kcal (2) G-P(sol) polarization free energy of solvation -21.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.668 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.535 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds