Wall clock time and date at job start Thu Mar 4 2021 18:00:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47246 * 2 1 4 4 C 1.50698 * 109.47555 * 120.00064 * 2 1 3 5 5 C 1.34190 * 126.54082 * 254.97696 * 4 2 1 6 6 N 1.36875 * 109.96752 * 179.97438 * 5 4 2 7 7 C 1.37406 * 109.97465 * 359.97438 * 6 5 4 8 8 C 1.39332 * 133.24179 * 180.02562 * 7 6 5 9 9 C 1.36354 * 120.23289 * 179.97438 * 8 7 6 10 10 C 1.40164 * 120.66710 * 359.95662 * 9 8 7 11 11 C 1.47664 * 119.97184 * 180.02562 * 10 9 8 12 12 O 1.21579 * 119.99890 * 180.02562 * 11 10 9 13 13 N 1.34771 * 119.99762 * 359.97438 * 11 10 9 14 14 C 1.46499 * 119.99903 * 180.02562 * 13 11 10 15 15 H 1.08997 * 112.90637 * 336.24925 * 14 13 11 16 16 C 1.53779 * 113.61746 * 107.50534 * 14 13 11 17 17 C 1.53779 * 87.08402 * 89.11614 * 16 14 13 18 18 O 1.42900 * 113.61490 * 270.88769 * 17 16 14 19 19 C 1.52994 * 113.61529 * 139.98073 * 17 16 14 20 20 F 1.39899 * 109.47402 * 322.50351 * 19 17 16 21 21 F 1.39901 * 109.46846 * 82.50400 * 19 17 16 22 22 F 1.39901 * 109.47376 * 202.50313 * 19 17 16 23 23 C 1.53784 * 87.08045 * 25.43458 * 17 16 14 24 24 C 1.39185 * 120.05793 * 0.29793 * 10 9 8 25 25 C 1.39234 * 119.39277 * 359.47492 * 24 10 9 26 26 H 0.96704 * 114.00305 * 59.99450 * 1 2 3 27 27 H 1.09003 * 109.47258 * 240.00261 * 2 1 3 28 28 H 1.48500 * 109.99871 * 298.68215 * 3 2 1 29 29 H 1.48500 * 110.00170 * 60.00326 * 3 2 1 30 30 H 1.07996 * 125.01646 * 0.02562 * 5 4 2 31 31 H 0.96995 * 125.01129 * 179.97438 * 6 5 4 32 32 H 1.08002 * 119.88558 * 359.97438 * 8 7 6 33 33 H 1.08005 * 119.66228 * 179.97438 * 9 8 7 34 34 H 0.97001 * 120.00748 * 0.02562 * 13 11 10 35 35 H 1.09006 * 113.61280 * 203.66438 * 16 14 13 36 36 H 1.08999 * 113.61062 * 334.48192 * 16 14 13 37 37 H 0.96701 * 113.99636 * 277.49879 * 18 17 16 38 38 H 1.09004 * 113.61451 * 220.02152 * 23 17 16 39 39 H 1.08994 * 113.61477 * 89.11454 * 23 17 16 40 40 H 1.08001 * 120.30896 * 179.72561 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4612 -0.1387 2.3227 6 7 2.8027 -1.1005 3.2347 7 6 2.4938 -2.3454 2.7419 8 6 2.6311 -3.6348 3.2517 9 6 2.2255 -4.7100 2.5178 10 6 1.6655 -4.5364 1.2447 11 6 1.2310 -5.7117 0.4634 12 8 0.7456 -5.5617 -0.6412 13 7 1.3734 -6.9506 0.9743 14 6 0.9428 -8.1167 0.1990 15 1 0.1820 -7.8752 -0.5432 16 6 2.1085 -8.9483 -0.3618 17 6 2.0714 -9.7430 0.9542 18 8 2.8960 -9.1885 1.9812 19 6 2.2824 -11.2468 0.7681 20 9 1.6451 -11.6656 -0.4048 21 9 3.6518 -11.5179 0.6771 22 9 1.7431 -11.9323 1.8620 23 6 0.5922 -9.3376 1.0658 24 6 1.5239 -3.2576 0.7139 25 6 1.9327 -2.1576 1.4631 26 1 -0.3934 0.4418 -0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5878 2.4585 -1.2242 29 1 1.5616 2.4679 1.2085 30 1 2.5973 0.9236 2.4620 31 1 3.2036 -0.9286 4.1011 32 1 3.0603 -3.7832 4.2316 33 1 2.3367 -5.7055 2.9217 34 1 1.7610 -7.0704 1.8554 35 1 1.8410 -9.5403 -1.2371 36 1 3.0254 -8.3758 -0.5020 37 1 3.8275 -9.4398 1.9163 38 1 0.2854 -9.0797 2.0795 39 1 -0.0897 -10.0360 0.5808 40 1 1.0970 -3.1194 -0.2685 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_13287722.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:00:35 Heat of formation + Delta-G solvation = -170.083896 kcal Electronic energy + Delta-G solvation = -31594.414067 eV Core-core repulsion = 26541.461553 eV Total energy + Delta-G solvation = -5052.952514 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.102 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -51.23320 -48.77809 -48.71110 -42.46029 -41.58842 -40.02008 -37.96653 -37.49857 -36.43435 -34.21519 -33.37000 -30.91721 -30.52228 -28.68784 -27.16778 -26.44373 -25.27257 -23.72997 -23.46730 -21.80677 -20.97201 -20.63809 -20.01170 -19.52583 -19.40745 -19.06002 -18.50657 -18.37213 -17.45370 -17.16754 -16.98658 -16.24306 -16.13634 -15.85910 -15.64428 -15.55377 -15.44343 -15.21231 -15.15558 -15.04278 -14.89805 -14.89023 -14.81744 -14.79246 -14.65646 -14.15132 -13.91376 -13.78735 -13.72930 -13.43120 -12.92565 -12.77090 -12.64469 -12.55368 -12.14845 -11.90467 -11.81339 -11.22607 -11.11779 -10.79167 -10.36690 -10.23102 -9.33271 -8.81388 -4.87535 -0.15768 0.20513 1.34483 1.48898 1.51865 1.64825 1.80484 1.96125 1.98799 2.10778 2.43973 2.58558 2.66659 2.86007 2.87601 3.40790 3.48399 3.53833 3.54749 3.64612 3.74448 3.80983 4.03337 4.13527 4.25065 4.27356 4.41659 4.47100 4.47806 4.56593 4.59324 4.68162 4.73250 4.78350 4.81696 5.01050 5.27935 5.34015 5.42250 5.51261 5.57426 5.98111 6.27213 6.50340 6.57992 6.64508 7.15626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.065 4.065 3 Si 0.784 3.216 4 C -0.181 4.181 5 C 0.079 3.921 6 N -0.571 5.571 7 C 0.112 3.888 8 C -0.125 4.125 9 C -0.065 4.065 10 C -0.179 4.179 11 C 0.565 3.435 12 O -0.583 6.583 13 N -0.691 5.691 14 C 0.126 3.874 15 H 0.106 0.894 16 C -0.165 4.165 17 C 0.072 3.928 18 O -0.516 6.516 19 C 0.433 3.567 20 F -0.178 7.178 21 F -0.186 7.186 22 F -0.184 7.184 23 C -0.120 4.120 24 C -0.017 4.017 25 C -0.129 4.129 26 H 0.390 0.610 27 H 0.071 0.929 28 H -0.293 1.293 29 H -0.278 1.278 30 H 0.205 0.795 31 H 0.439 0.561 32 H 0.161 0.839 33 H 0.157 0.843 34 H 0.417 0.583 35 H 0.121 0.879 36 H 0.094 0.906 37 H 0.406 0.594 38 H 0.107 0.893 39 H 0.133 0.867 40 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.675 2.526 4.818 7.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.172 4.172 3 Si 0.687 3.313 4 C -0.188 4.188 5 C -0.049 4.049 6 N -0.175 5.175 7 C 0.002 3.998 8 C -0.145 4.145 9 C -0.085 4.085 10 C -0.184 4.184 11 C 0.355 3.645 12 O -0.464 6.464 13 N -0.344 5.344 14 C 0.020 3.980 15 H 0.124 0.876 16 C -0.204 4.204 17 C 0.029 3.971 18 O -0.325 6.325 19 C 0.378 3.622 20 F -0.159 7.159 21 F -0.167 7.167 22 F -0.165 7.165 23 C -0.158 4.158 24 C -0.037 4.037 25 C -0.134 4.134 26 H 0.239 0.761 27 H 0.089 0.911 28 H -0.220 1.220 29 H -0.205 1.205 30 H 0.222 0.778 31 H 0.280 0.720 32 H 0.179 0.821 33 H 0.175 0.825 34 H 0.257 0.743 35 H 0.139 0.861 36 H 0.113 0.887 37 H 0.259 0.741 38 H 0.126 0.874 39 H 0.151 0.849 40 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 4.748 3.396 4.932 7.642 hybrid contribution -0.411 -0.907 -0.393 1.071 sum 4.337 2.489 4.540 6.753 Atomic orbital electron populations 1.86586 1.19424 1.80786 1.50523 1.24540 0.83318 1.12348 0.96998 0.94123 0.89656 0.70310 0.77197 1.19816 1.09809 0.91091 0.98056 1.22085 0.99165 0.95550 0.88094 1.41735 1.53934 1.03211 1.18629 1.18645 0.99729 0.87821 0.93582 1.20051 1.04471 0.87898 1.02114 1.20867 0.95810 1.00054 0.91782 1.19544 1.09153 0.92213 0.97451 1.18431 0.77097 0.83805 0.85147 1.90762 1.46719 1.86733 1.22223 1.45451 1.63348 1.03959 1.21645 1.21609 0.97064 0.84649 0.94631 0.87629 1.24235 1.01557 0.98315 0.96303 1.23566 0.96873 0.84024 0.92685 1.86493 1.24963 1.72424 1.48614 1.21471 0.73804 0.93035 0.73851 1.93187 1.81972 1.91815 1.48963 1.93181 1.32375 1.95275 1.95918 1.93211 1.85942 1.82616 1.54739 1.23589 0.91325 0.97066 1.03788 1.20584 0.94179 0.90489 0.98456 1.19201 1.05261 0.93445 0.95495 0.76061 0.91103 1.22024 1.20480 0.77840 0.71972 0.82118 0.82508 0.74298 0.86121 0.88736 0.74100 0.87417 0.84871 0.86996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.65 12.86 -148.98 -1.92 -5.56 16 2 C -0.06 -0.17 3.05 71.24 0.22 0.05 16 3 Si 0.78 -2.25 30.79 68.60 2.11 -0.13 16 4 C -0.18 -0.75 5.61 -18.61 -0.10 -0.86 16 5 C 0.08 -0.16 10.43 82.98 0.87 0.70 16 6 N -0.57 2.25 6.05 -187.47 -1.13 1.11 16 7 C 0.11 0.17 7.27 39.19 0.28 0.45 16 8 C -0.13 0.27 10.00 22.09 0.22 0.49 16 9 C -0.07 0.05 9.46 22.30 0.21 0.26 16 10 C -0.18 -1.12 5.87 -20.09 -0.12 -1.23 16 11 C 0.57 4.57 7.76 86.73 0.67 5.25 16 12 O -0.58 -9.55 15.93 -3.97 -0.06 -9.62 16 13 N -0.69 -0.39 5.10 -443.08 -2.26 -2.65 16 14 C 0.13 -0.10 4.32 45.52 0.20 0.10 16 15 H 0.11 0.26 7.47 -2.39 -0.02 0.24 16 16 C -0.17 0.52 7.15 31.12 0.22 0.74 16 17 C 0.07 -0.30 1.36 -10.27 -0.01 -0.32 16 18 O -0.52 3.24 12.14 -148.98 -1.81 1.44 16 19 C 0.43 -0.36 2.85 71.98 0.21 -0.16 16 20 F -0.18 -0.11 15.75 44.97 0.71 0.60 16 21 F -0.19 -0.03 16.65 44.97 0.75 0.72 16 22 F -0.18 -0.38 17.18 44.97 0.77 0.39 16 23 C -0.12 0.55 7.01 31.12 0.22 0.77 16 24 C -0.02 -0.17 9.64 22.74 0.22 0.05 16 25 C -0.13 -0.93 6.34 -20.21 -0.13 -1.06 16 26 H 0.39 -0.59 8.74 -74.05 -0.65 -1.24 16 27 H 0.07 0.14 7.96 -2.39 -0.02 0.12 16 28 H -0.29 -0.73 7.11 99.48 0.71 -0.02 16 29 H -0.28 -0.29 7.04 99.48 0.70 0.41 16 30 H 0.21 -1.75 6.30 -2.91 -0.02 -1.77 16 31 H 0.44 -4.94 8.96 -92.71 -0.83 -5.77 16 32 H 0.16 -1.44 8.06 -2.91 -0.02 -1.46 16 33 H 0.16 -1.13 6.36 -2.91 -0.02 -1.15 16 34 H 0.42 -1.61 5.59 -92.71 -0.52 -2.13 16 35 H 0.12 -0.49 7.13 -2.38 -0.02 -0.51 16 36 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 37 H 0.41 -4.65 8.43 -74.06 -0.62 -5.27 16 38 H 0.11 -0.59 8.14 -2.39 -0.02 -0.60 16 39 H 0.13 -0.90 7.88 -2.39 -0.02 -0.92 16 40 H 0.11 1.50 7.64 -2.91 -0.02 1.48 16 Total: 0.00 -26.24 351.56 -1.08 -27.32 By element: Atomic # 1 Polarization: -17.45 SS G_CDS: -1.41 Total: -18.85 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: 3.17 Total: 5.24 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -3.39 Total: -1.53 kcal Atomic # 8 Polarization: -9.96 SS G_CDS: -3.79 Total: -13.74 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 2.23 Total: 1.71 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: 2.11 Total: -0.13 kcal Total: -26.24 -1.08 -27.32 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_13287722.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.766 kcal (2) G-P(sol) polarization free energy of solvation -26.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.008 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.076 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.318 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.084 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds