Wall clock time and date at job start Thu Mar 4 2021 18:01:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.46950 * 2 1 4 4 C 1.50702 * 109.46801 * 240.00586 * 2 1 3 5 5 C 1.33745 * 125.11833 * 300.01532 * 4 2 1 6 6 C 1.37796 * 115.07883 * 179.73715 * 5 4 2 7 7 C 1.34980 * 114.70291 * 0.49921 * 6 5 4 8 8 C 1.47562 * 125.27714 * 179.78996 * 7 6 5 9 9 C 1.39823 * 119.99617 * 179.72638 * 8 7 6 10 10 C 1.36566 * 119.99764 * 180.02562 * 9 8 7 11 11 C 1.39837 * 120.00057 * 359.97438 * 10 9 8 12 12 C 1.47555 * 120.00337 * 179.97438 * 11 10 9 13 13 O 1.21600 * 119.99563 * 0.02562 * 12 11 10 14 14 N 1.34769 * 120.00109 * 179.97438 * 12 11 10 15 15 C 1.46501 * 120.00014 * 179.97438 * 14 12 11 16 16 H 1.09004 * 112.85074 * 336.20143 * 15 14 12 17 17 C 1.53782 * 113.61142 * 107.50467 * 15 14 12 18 18 C 1.53962 * 87.11063 * 89.18830 * 17 15 14 19 19 O 1.42894 * 113.61503 * 270.84416 * 18 17 15 20 20 C 1.52999 * 113.66529 * 139.88900 * 18 17 15 21 21 F 1.39906 * 109.47316 * 322.55120 * 20 18 17 22 22 F 1.39897 * 109.47311 * 82.55104 * 20 18 17 23 23 F 1.39897 * 109.46987 * 202.55279 * 20 18 17 24 24 C 1.53781 * 113.61619 * 205.00312 * 15 14 12 25 25 C 1.39835 * 119.99422 * 0.27586 * 11 10 9 26 26 C 1.36555 * 119.99936 * 359.43786 * 25 11 10 27 27 S 1.75855 * 125.12163 * 120.02663 * 4 2 1 28 28 H 0.96700 * 113.99758 * 60.00282 * 1 2 3 29 29 H 1.08997 * 109.47388 * 120.00368 * 2 1 3 30 30 H 1.48497 * 110.00173 * 298.68598 * 3 2 1 31 31 H 1.48502 * 109.99831 * 60.00367 * 3 2 1 32 32 H 1.08004 * 122.46012 * 359.97438 * 5 4 2 33 33 H 1.08004 * 122.65060 * 180.30507 * 6 5 4 34 34 H 1.07991 * 120.00360 * 0.02562 * 9 8 7 35 35 H 1.08003 * 119.99886 * 179.97438 * 10 9 8 36 36 H 0.97001 * 120.00013 * 0.02562 * 14 12 11 37 37 H 1.08997 * 113.61668 * 203.66381 * 17 15 14 38 38 H 1.08998 * 113.61674 * 334.48890 * 17 15 14 39 39 H 0.96703 * 113.99734 * 277.42605 * 19 18 17 40 40 H 1.09002 * 113.61445 * 25.43587 * 24 15 14 41 41 H 1.09002 * 113.61408 * 156.25317 * 24 15 14 42 42 H 1.08002 * 119.99712 * 179.72401 * 25 11 10 43 43 H 1.08005 * 120.00417 * 180.27705 * 26 25 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.6718 -1.9845 -1.5432 6 6 2.2326 -2.4222 -2.7233 7 6 2.9672 -1.4969 -3.3761 8 6 3.6727 -1.7151 -4.6537 9 6 4.3999 -0.6733 -5.2374 10 6 5.0524 -0.8750 -6.4200 11 6 4.9937 -2.1236 -7.0468 12 6 5.6982 -2.3415 -8.3249 13 8 6.3303 -1.4353 -8.8328 14 7 5.6420 -3.5451 -8.9287 15 6 6.3411 -3.7612 -10.1979 16 1 6.5093 -2.8372 -10.7512 17 6 7.5958 -4.6408 -10.0681 18 6 6.6765 -5.8520 -10.3092 19 8 6.1150 -6.3920 -9.1112 20 6 7.2941 -6.9216 -11.2122 21 9 8.0395 -6.3050 -12.2229 22 9 8.1308 -7.7466 -10.4530 23 9 6.2767 -7.6911 -11.7866 24 6 5.7352 -4.8883 -11.0508 25 6 4.2621 -3.1639 -6.4656 26 6 3.6145 -2.9638 -5.2801 27 16 2.9471 0.0113 -2.4715 28 1 -0.3933 0.4417 -0.7651 29 1 1.7924 -0.5139 0.8899 30 1 1.5878 2.4586 -1.2241 31 1 1.5615 2.4679 1.2086 32 1 1.0639 -2.6224 -0.9186 33 1 2.0977 -3.4273 -3.0950 34 1 4.4456 0.2909 -4.7532 35 1 5.6138 -0.0701 -6.8712 36 1 5.1381 -4.2680 -8.5233 37 1 8.3244 -4.4822 -10.8631 38 1 8.0426 -4.6200 -9.0741 39 1 6.7025 -6.9988 -8.6403 40 1 4.6791 -5.0684 -10.8498 41 1 5.9539 -4.7965 -12.1147 42 1 4.2130 -4.1270 -6.9519 43 1 3.0531 -3.7686 -4.8288 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_13308390.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:01:00 Heat of formation + Delta-G solvation = -167.725166 kcal Electronic energy + Delta-G solvation = -33858.301455 eV Core-core repulsion = 28548.039481 eV Total energy + Delta-G solvation = -5310.261974 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.079 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -51.23438 -48.78008 -48.71410 -41.79646 -40.68277 -39.63863 -38.97092 -37.47431 -36.45371 -34.49705 -33.28164 -32.19354 -30.50803 -28.81464 -27.21364 -27.16183 -25.00125 -24.14414 -23.81784 -23.28869 -21.89172 -20.99886 -20.27528 -20.11838 -19.53782 -19.41434 -19.11988 -18.58376 -17.71942 -17.28261 -17.08730 -16.60955 -16.33628 -16.27617 -16.17116 -16.15206 -15.77789 -15.58677 -15.55509 -15.31863 -15.15758 -15.02515 -14.90118 -14.89427 -14.68063 -14.51151 -14.45669 -14.30865 -13.88362 -13.78829 -13.75326 -13.62139 -13.26908 -13.10915 -12.90825 -12.61702 -12.54032 -12.41642 -12.07651 -11.91252 -11.51615 -11.23657 -11.15334 -10.87144 -10.64956 -10.23034 -10.17731 -9.54145 -9.02557 -5.08319 -0.88680 0.25419 0.35040 0.39884 0.77113 1.20758 1.51770 1.52784 1.55466 1.84908 1.92553 1.94645 2.43227 2.58577 2.65847 2.82712 2.86149 3.30821 3.39410 3.41216 3.49664 3.53812 3.66503 3.73048 3.75729 3.85566 4.20934 4.24016 4.32078 4.41925 4.46628 4.47521 4.52858 4.57966 4.63382 4.67667 4.72920 4.77836 4.93499 5.02392 5.11842 5.23423 5.29605 5.33392 5.40381 5.49123 5.74119 6.25533 6.37542 6.44746 7.09237 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.034 4.034 3 Si 0.709 3.291 4 C -0.219 4.219 5 C -0.111 4.111 6 C -0.117 4.117 7 C -0.160 4.160 8 C 0.008 3.992 9 C -0.129 4.129 10 C -0.061 4.061 11 C -0.151 4.151 12 C 0.561 3.439 13 O -0.576 6.576 14 N -0.692 5.692 15 C 0.127 3.873 16 H 0.109 0.891 17 C -0.165 4.165 18 C 0.071 3.929 19 O -0.516 6.516 20 C 0.432 3.568 21 F -0.178 7.178 22 F -0.186 7.186 23 F -0.184 7.184 24 C -0.120 4.120 25 C -0.067 4.067 26 C -0.109 4.109 27 S 0.124 5.876 28 H 0.388 0.612 29 H 0.140 0.860 30 H -0.266 1.266 31 H -0.272 1.272 32 H 0.154 0.846 33 H 0.166 0.834 34 H 0.135 0.865 35 H 0.131 0.869 36 H 0.417 0.583 37 H 0.121 0.879 38 H 0.094 0.906 39 H 0.406 0.594 40 H 0.108 0.892 41 H 0.133 0.867 42 H 0.158 0.842 43 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.393 -3.247 1.755 3.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.146 4.146 3 Si 0.612 3.388 4 C -0.336 4.336 5 C -0.141 4.141 6 C -0.147 4.147 7 C -0.277 4.277 8 C 0.006 3.994 9 C -0.147 4.147 10 C -0.080 4.080 11 C -0.155 4.155 12 C 0.350 3.650 13 O -0.456 6.456 14 N -0.344 5.344 15 C 0.021 3.979 16 H 0.127 0.873 17 C -0.204 4.204 18 C 0.027 3.973 19 O -0.325 6.325 20 C 0.378 3.622 21 F -0.159 7.159 22 F -0.168 7.168 23 F -0.165 7.165 24 C -0.158 4.158 25 C -0.085 4.085 26 C -0.129 4.129 27 S 0.392 5.608 28 H 0.237 0.763 29 H 0.157 0.843 30 H -0.192 1.192 31 H -0.198 1.198 32 H 0.171 0.829 33 H 0.183 0.817 34 H 0.153 0.847 35 H 0.149 0.851 36 H 0.257 0.743 37 H 0.139 0.861 38 H 0.113 0.887 39 H 0.259 0.741 40 H 0.126 0.874 41 H 0.151 0.849 42 H 0.176 0.824 43 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 0.069 -0.305 1.573 1.604 hybrid contribution -1.106 -2.288 -0.164 2.546 sum -1.037 -2.593 1.409 3.128 Atomic orbital electron populations 1.86601 1.17828 1.80199 1.50127 1.24462 0.83351 1.10096 0.96689 0.94471 0.91015 0.73857 0.79462 1.25098 1.07087 0.99209 1.02226 1.20186 1.01322 0.94925 0.97656 1.20635 0.97772 1.01343 0.94939 1.23178 1.06575 0.98209 0.99735 1.18461 0.95060 0.94585 0.91337 1.21040 0.98296 0.99313 0.96085 1.20954 0.96542 0.96454 0.94091 1.19991 1.03130 0.96254 0.96076 1.18451 0.79699 0.82254 0.84573 1.90790 1.44349 1.43829 1.66672 1.45502 1.52679 1.13107 1.23119 1.21621 0.92182 0.98851 0.85217 0.87322 1.24264 0.97797 0.92555 1.05752 1.23622 0.98042 0.88747 0.86874 1.86486 1.45626 1.65962 1.34470 1.21486 0.76655 0.83152 0.80912 1.93189 1.77749 1.82441 1.62565 1.93181 1.73219 1.74870 1.75524 1.93211 1.59760 1.77596 1.85973 1.23587 1.01138 0.90434 1.00616 1.21234 0.93834 0.98585 0.94895 1.21177 1.00028 0.96443 0.95237 1.84198 1.48825 1.12867 1.14922 0.76280 0.84290 1.19169 1.19791 0.82857 0.81697 0.84733 0.85071 0.74283 0.86123 0.88718 0.74092 0.87393 0.84870 0.82440 0.82349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.41 12.86 -148.98 -1.92 -2.32 16 2 C -0.03 0.06 2.96 71.24 0.21 0.27 16 3 Si 0.71 -1.13 30.96 68.60 2.12 1.00 16 4 C -0.22 0.26 5.73 24.67 0.14 0.40 16 5 C -0.11 0.19 10.00 21.14 0.21 0.41 16 6 C -0.12 0.30 9.64 21.42 0.21 0.51 16 7 C -0.16 0.08 6.37 23.98 0.15 0.23 16 8 C 0.01 0.00 5.88 -20.05 -0.12 -0.12 16 9 C -0.13 -0.14 9.54 22.26 0.21 0.07 16 10 C -0.06 -0.18 9.53 22.27 0.21 0.03 16 11 C -0.15 -0.22 5.88 -20.05 -0.12 -0.34 16 12 C 0.56 2.27 7.76 86.70 0.67 2.94 16 13 O -0.58 -6.95 15.93 -4.03 -0.06 -7.01 16 14 N -0.69 1.65 5.10 -443.17 -2.26 -0.61 16 15 C 0.13 -0.40 4.32 45.52 0.20 -0.21 16 16 H 0.11 -0.03 7.46 -2.38 -0.02 -0.05 16 17 C -0.16 0.81 7.16 31.18 0.22 1.04 16 18 C 0.07 -0.40 1.36 -10.20 -0.01 -0.42 16 19 O -0.52 3.97 12.16 -148.98 -1.81 2.16 16 20 C 0.43 -0.83 2.86 71.98 0.21 -0.62 16 21 F -0.18 0.08 15.76 44.97 0.71 0.78 16 22 F -0.19 0.13 16.65 44.97 0.75 0.88 16 23 F -0.18 -0.21 17.18 44.97 0.77 0.56 16 24 C -0.12 0.77 7.00 31.12 0.22 0.99 16 25 C -0.07 0.27 9.48 22.26 0.21 0.48 16 26 C -0.11 0.43 9.48 22.26 0.21 0.65 16 27 S 0.12 -0.09 19.46 -56.49 -1.10 -1.19 16 28 H 0.39 -1.70 8.70 -74.06 -0.64 -2.35 16 29 H 0.14 -0.59 7.96 -2.39 -0.02 -0.61 16 30 H -0.27 -0.68 7.11 99.48 0.71 0.03 16 31 H -0.27 -1.26 7.11 99.48 0.71 -0.55 16 32 H 0.15 -0.55 8.06 -2.91 -0.02 -0.57 16 33 H 0.17 -1.23 6.88 -2.91 -0.02 -1.25 16 34 H 0.13 -0.10 7.26 -2.92 -0.02 -0.12 16 35 H 0.13 0.56 7.64 -2.91 -0.02 0.54 16 36 H 0.42 -2.74 5.61 -92.71 -0.52 -3.26 16 37 H 0.12 -0.68 7.13 -2.39 -0.02 -0.70 16 38 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 39 H 0.41 -5.12 8.43 -74.06 -0.62 -5.74 16 40 H 0.11 -0.79 8.14 -2.39 -0.02 -0.81 16 41 H 0.13 -1.12 7.88 -2.39 -0.02 -1.14 16 42 H 0.16 -1.58 6.38 -2.91 -0.02 -1.60 16 43 H 0.16 -1.46 6.74 -2.91 -0.02 -1.48 16 Total: 0.00 -19.15 387.64 -0.37 -19.53 By element: Atomic # 1 Polarization: -19.49 SS G_CDS: -0.61 Total: -20.10 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: 3.04 Total: 6.33 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -2.26 Total: -0.61 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -3.79 Total: -7.18 kcal Atomic # 9 Polarization: 0.00 SS G_CDS: 2.23 Total: 2.23 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: 2.12 Total: 1.00 kcal Atomic # 16 Polarization: -0.09 SS G_CDS: -1.10 Total: -1.19 kcal Total: -19.15 -0.37 -19.53 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_13308390.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.199 kcal (2) G-P(sol) polarization free energy of solvation -19.154 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -167.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.372 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.526 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds