Wall clock time and date at job start Thu Mar 4 2021 18:01:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86308 * 109.47006 * 2 1 4 4 C 1.50702 * 109.47177 * 119.99830 * 2 1 3 5 5 C 1.31120 * 118.54591 * 250.00388 * 4 2 1 6 6 N 1.38925 * 121.84626 * 180.38198 * 5 4 2 7 7 C 1.47032 * 118.88384 * 346.68584 * 6 5 4 8 8 C 1.50695 * 109.82217 * 163.20506 * 7 6 5 9 9 O 1.21282 * 119.99917 * 339.99477 * 8 7 6 10 10 N 1.34772 * 120.00305 * 159.99954 * 8 7 6 11 11 C 1.46506 * 120.00033 * 179.97438 * 10 8 7 12 12 H 1.08992 * 112.90684 * 336.24748 * 11 10 8 13 13 C 1.54049 * 113.61276 * 107.61836 * 11 10 8 14 14 C 1.53781 * 87.08031 * 89.07129 * 13 11 10 15 15 O 1.42898 * 113.68948 * 270.86685 * 14 13 11 16 16 C 1.52991 * 113.61611 * 139.97702 * 14 13 11 17 17 F 1.39901 * 109.47365 * 322.50364 * 16 14 13 18 18 F 1.39902 * 109.47259 * 82.50273 * 16 14 13 19 19 F 1.39900 * 109.47459 * 202.50218 * 16 14 13 20 20 C 1.53781 * 87.08070 * 25.42738 * 14 13 11 21 21 C 1.53541 * 107.65915 * 43.66127 * 7 6 5 22 22 C 1.50202 * 118.54514 * 69.98077 * 4 2 1 23 23 H 0.96698 * 113.99994 * 60.00220 * 1 2 3 24 24 H 1.09001 * 109.47442 * 239.99993 * 2 1 3 25 25 H 1.48496 * 109.99840 * 298.68008 * 3 2 1 26 26 H 1.48495 * 109.99841 * 59.99831 * 3 2 1 27 27 H 1.07997 * 119.07626 * 0.35843 * 5 4 2 28 28 H 0.97001 * 120.55621 * 166.70081 * 6 5 4 29 29 H 1.09010 * 109.81595 * 284.05809 * 7 6 5 30 30 H 0.97002 * 120.00078 * 359.97438 * 10 8 7 31 31 H 1.09005 * 113.62125 * 334.52173 * 13 11 10 32 32 H 1.08996 * 113.68970 * 203.62749 * 13 11 10 33 33 H 0.96699 * 114.00481 * 277.53589 * 15 14 13 34 34 H 1.09002 * 113.61445 * 89.11830 * 20 14 13 35 35 H 1.09002 * 113.61408 * 219.93560 * 20 14 13 36 36 H 1.08999 * 109.62309 * 58.77757 * 21 7 6 37 37 H 1.08998 * 109.62011 * 179.33074 * 21 7 6 38 38 H 1.09000 * 109.32763 * 280.22459 * 22 4 2 39 39 H 1.08991 * 109.32981 * 39.88431 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.5116 -0.0027 2.1695 6 7 3.0066 -0.5879 3.3282 7 6 2.6221 -1.9711 3.6455 8 6 3.5611 -2.5385 4.6785 9 8 4.6504 -2.0336 4.8502 10 7 3.1906 -3.6070 5.4116 11 6 4.1039 -4.1588 6.4155 12 1 5.1487 -3.9235 6.2135 13 6 3.6735 -3.8701 7.8662 14 6 2.8657 -5.1771 7.8035 15 8 1.5315 -5.0049 7.3214 16 6 2.9302 -5.9999 9.0917 17 9 4.2155 -5.9122 9.6372 18 9 1.9991 -5.5027 10.0098 19 9 2.6352 -7.3373 8.8062 20 6 3.8554 -5.6449 6.7235 21 6 2.7170 -2.7898 2.3500 22 6 1.7448 -2.1976 1.3271 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5138 -0.8900 25 1 1.5879 2.4586 -1.2242 26 1 1.5614 2.4679 1.2084 27 1 2.6076 1.0650 2.0384 28 1 3.5959 -0.0922 3.9180 29 1 1.5999 -1.9930 4.0237 30 1 2.3193 -4.0106 5.2746 31 1 3.0545 -2.9787 7.9690 32 1 4.4959 -3.8990 8.5810 33 1 0.9043 -4.7108 7.9961 34 1 4.7285 -6.1595 7.1248 35 1 3.3835 -6.1876 5.9044 36 1 3.7335 -2.7409 1.9597 37 1 2.4490 -3.8268 2.5519 38 1 0.7216 -2.4136 1.6348 39 1 1.9313 -2.6487 0.3526 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_15413834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:01:33 Heat of formation + Delta-G solvation = -211.600451 kcal Electronic energy + Delta-G solvation = -28257.476023 eV Core-core repulsion = 23560.090160 eV Total energy + Delta-G solvation = -4697.385864 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.118 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -51.24592 -48.79308 -48.72476 -41.79404 -40.60505 -39.22148 -37.49053 -36.43728 -34.35795 -33.29940 -32.81164 -28.96994 -27.41670 -27.16589 -25.39527 -24.26496 -23.44361 -21.97862 -21.00379 -20.11627 -19.54569 -19.43082 -19.06642 -18.98511 -18.39342 -17.60563 -17.26147 -17.01045 -16.41457 -16.05595 -15.89630 -15.59633 -15.46863 -15.33737 -15.18862 -15.16651 -14.91498 -14.90721 -14.74308 -14.66855 -14.38859 -14.17588 -13.84747 -13.82429 -13.69080 -13.58624 -12.96383 -12.87733 -12.61924 -12.42748 -11.91351 -11.75908 -11.69528 -11.24506 -11.23595 -10.91130 -10.25751 -10.22343 -8.45628 -4.89303 1.29970 1.38875 1.44719 1.51339 1.59560 1.79474 1.96355 2.41646 2.56818 2.61122 2.67712 2.85963 3.38535 3.41640 3.52126 3.56598 3.67613 3.77386 3.93816 4.06773 4.23836 4.25895 4.46830 4.47617 4.47910 4.60322 4.65471 4.68089 4.72752 4.77653 4.80775 5.02896 5.25123 5.30544 5.40291 5.58147 6.21531 6.28027 6.44798 6.71434 6.82859 7.07400 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.058 4.058 3 Si 0.742 3.258 4 C -0.247 4.247 5 C 0.136 3.864 6 N -0.735 5.735 7 C 0.137 3.863 8 C 0.520 3.480 9 O -0.566 6.566 10 N -0.692 5.692 11 C 0.131 3.869 12 H 0.110 0.890 13 C -0.165 4.165 14 C 0.070 3.930 15 O -0.516 6.516 16 C 0.431 3.569 17 F -0.178 7.178 18 F -0.188 7.188 19 F -0.184 7.184 20 C -0.120 4.120 21 C -0.120 4.120 22 C -0.052 4.052 23 H 0.386 0.614 24 H 0.081 0.919 25 H -0.294 1.294 26 H -0.300 1.300 27 H 0.138 0.862 28 H 0.408 0.592 29 H 0.102 0.898 30 H 0.419 0.581 31 H 0.094 0.906 32 H 0.120 0.880 33 H 0.405 0.595 34 H 0.132 0.868 35 H 0.108 0.892 36 H 0.068 0.932 37 H 0.099 0.901 38 H 0.063 0.937 39 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.183 -1.632 -1.141 2.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.169 4.169 3 Si 0.650 3.350 4 C -0.257 4.257 5 C 0.015 3.985 6 N -0.368 5.368 7 C 0.028 3.972 8 C 0.306 3.694 9 O -0.444 6.444 10 N -0.344 5.344 11 C 0.024 3.976 12 H 0.128 0.872 13 C -0.204 4.204 14 C 0.026 3.974 15 O -0.326 6.326 16 C 0.376 3.624 17 F -0.159 7.159 18 F -0.169 7.169 19 F -0.166 7.166 20 C -0.158 4.158 21 C -0.159 4.159 22 C -0.089 4.089 23 H 0.236 0.764 24 H 0.099 0.901 25 H -0.222 1.222 26 H -0.228 1.228 27 H 0.155 0.845 28 H 0.245 0.755 29 H 0.120 0.880 30 H 0.258 0.742 31 H 0.112 0.888 32 H 0.138 0.862 33 H 0.258 0.742 34 H 0.150 0.850 35 H 0.127 0.873 36 H 0.087 0.913 37 H 0.117 0.883 38 H 0.082 0.918 39 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.038 -1.099 -0.966 1.794 hybrid contribution -1.767 0.066 0.666 1.889 sum -0.728 -1.034 -0.299 1.299 Atomic orbital electron populations 1.86575 1.19695 1.80356 1.50524 1.24728 0.83128 1.09894 0.99115 0.94505 0.90980 0.73761 0.75795 1.20154 1.12357 0.96122 0.97093 1.20510 0.95556 0.96513 0.85890 1.44320 1.54929 1.12787 1.24767 1.21076 0.97447 0.84034 0.94632 1.20760 0.87245 0.80164 0.81235 1.90727 1.23841 1.60752 1.69081 1.45547 1.20655 1.31093 1.37115 1.21635 0.95489 0.93251 0.87178 0.87169 1.24280 1.00989 0.96348 0.98797 1.23622 0.87258 0.96578 0.89961 1.86501 1.16271 1.89754 1.40025 1.21538 0.73642 0.79496 0.87675 1.93187 1.39245 1.96012 1.87495 1.93181 1.66374 1.87300 1.70045 1.93211 1.93098 1.36806 1.93466 1.23585 0.97761 0.96925 0.97504 1.21855 1.01042 0.99581 0.93402 1.19963 0.98482 0.91173 0.99326 0.76428 0.90103 1.22218 1.22814 0.84474 0.75518 0.88028 0.74223 0.88790 0.86199 0.74207 0.84984 0.87344 0.91305 0.88266 0.91845 0.90326 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.92 12.86 -148.98 -1.92 -3.84 16 2 C -0.06 -0.04 2.80 71.24 0.20 0.16 16 3 Si 0.74 -0.21 29.92 68.60 2.05 1.84 16 4 C -0.25 -0.47 5.40 -16.76 -0.09 -0.56 16 5 C 0.14 0.21 9.62 83.41 0.80 1.02 16 6 N -0.74 -0.80 5.46 -328.99 -1.80 -2.60 16 7 C 0.14 -0.21 3.36 44.32 0.15 -0.06 16 8 C 0.52 0.10 7.08 87.66 0.62 0.72 16 9 O -0.57 -4.38 15.70 -3.04 -0.05 -4.43 16 10 N -0.69 3.35 5.16 -439.60 -2.27 1.08 16 11 C 0.13 -0.64 4.34 45.61 0.20 -0.44 16 12 H 0.11 -0.25 7.47 -2.39 -0.02 -0.27 16 13 C -0.17 0.98 7.16 31.21 0.22 1.20 16 14 C 0.07 -0.42 1.36 -10.27 -0.01 -0.43 16 15 O -0.52 3.84 12.15 -148.98 -1.81 2.03 16 16 C 0.43 -0.83 2.85 71.98 0.21 -0.62 16 17 F -0.18 0.11 15.75 44.97 0.71 0.82 16 18 F -0.19 0.09 16.65 44.97 0.75 0.84 16 19 F -0.18 -0.23 17.18 44.97 0.77 0.54 16 20 C -0.12 0.88 7.00 31.12 0.22 1.10 16 21 C -0.12 0.32 5.47 30.79 0.17 0.49 16 22 C -0.05 0.02 5.85 29.71 0.17 0.19 16 23 H 0.39 -1.49 8.74 -74.06 -0.65 -2.14 16 24 H 0.08 -0.19 7.96 -2.39 -0.02 -0.21 16 25 H -0.29 -1.33 7.11 99.48 0.71 -0.62 16 26 H -0.30 -1.90 6.88 99.48 0.68 -1.22 16 27 H 0.14 -0.02 4.34 -2.91 -0.01 -0.03 16 28 H 0.41 0.53 8.12 -92.71 -0.75 -0.22 16 29 H 0.10 -0.38 8.14 -2.38 -0.02 -0.40 16 30 H 0.42 -3.37 7.60 -92.71 -0.70 -4.07 16 31 H 0.09 -0.51 8.14 -2.38 -0.02 -0.53 16 32 H 0.12 -0.77 7.13 -2.39 -0.02 -0.79 16 33 H 0.40 -4.86 8.42 -74.06 -0.62 -5.49 16 34 H 0.13 -1.21 7.88 -2.39 -0.02 -1.23 16 35 H 0.11 -0.88 8.14 -2.39 -0.02 -0.90 16 36 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 37 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 38 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 39 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 Total: 0.00 -17.63 331.75 -2.26 -19.89 By element: Atomic # 1 Polarization: -17.37 SS G_CDS: -1.56 Total: -18.93 kcal Atomic # 6 Polarization: -0.09 SS G_CDS: 2.85 Total: 2.76 kcal Atomic # 7 Polarization: 2.55 SS G_CDS: -4.06 Total: -1.52 kcal Atomic # 8 Polarization: -2.46 SS G_CDS: -3.77 Total: -6.24 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 2.23 Total: 2.19 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: 2.05 Total: 1.84 kcal Total: -17.63 -2.26 -19.89 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_15413834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -191.714 kcal (2) G-P(sol) polarization free energy of solvation -17.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -209.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.259 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.887 kcal (6) G-S(sol) free energy of system = (1) + (5) -211.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds