Wall clock time and date at job start Thu Mar 4 2021 18:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86302 * 109.46621 * 2 1 4 4 C 1.50696 * 109.46914 * 240.00318 * 2 1 3 5 5 C 1.38708 * 120.02796 * 284.99476 * 4 2 1 6 6 O 1.35900 * 120.05751 * 359.96075 * 5 4 2 7 7 C 1.42894 * 117.00370 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.47583 * 179.97438 * 7 6 5 9 9 O 1.21283 * 119.99341 * 359.97438 * 8 7 6 10 10 N 1.34776 * 120.00405 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99941 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85388 * 23.79874 * 11 10 8 13 13 C 1.53786 * 113.61357 * 154.99692 * 11 10 8 14 14 C 1.53783 * 87.08007 * 89.11437 * 13 11 10 15 15 O 1.42899 * 113.61444 * 270.79998 * 14 13 11 16 16 C 1.53001 * 113.61412 * 139.97962 * 14 13 11 17 17 F 1.39897 * 109.46849 * 59.99956 * 16 14 13 18 18 F 1.39903 * 109.46958 * 179.97438 * 16 14 13 19 19 F 1.39894 * 109.47229 * 300.00074 * 16 14 13 20 20 C 1.53784 * 87.08391 * 25.42981 * 14 13 11 21 21 C 1.38759 * 119.89010 * 179.97438 * 5 4 2 22 22 C 1.38119 * 119.94381 * 0.02562 * 21 5 4 23 23 C 1.38295 * 120.05704 * 359.97438 * 22 21 5 24 24 C 1.38171 * 120.03158 * 104.95308 * 4 2 1 25 25 H 0.96701 * 113.99868 * 299.99783 * 1 2 3 26 26 H 1.08999 * 109.47369 * 119.99832 * 2 1 3 27 27 H 1.48506 * 109.99736 * 178.68311 * 3 2 1 28 28 H 1.48502 * 110.00216 * 300.00095 * 3 2 1 29 29 H 1.09001 * 109.47181 * 300.00095 * 7 6 5 30 30 H 1.08998 * 109.47333 * 59.99666 * 7 6 5 31 31 H 0.97002 * 119.99581 * 359.97438 * 10 8 7 32 32 H 1.09002 * 113.60902 * 203.66443 * 13 11 10 33 33 H 1.09003 * 113.61259 * 334.56520 * 13 11 10 34 34 H 0.96692 * 114.00503 * 180.02562 * 15 14 13 35 35 H 1.08997 * 113.62035 * 220.01721 * 20 14 13 36 36 H 1.09000 * 113.61248 * 89.11401 * 20 14 13 37 37 H 1.08001 * 120.03037 * 180.02562 * 21 5 4 38 38 H 1.07997 * 119.97310 * 179.97438 * 22 21 5 39 39 H 1.07995 * 119.94657 * 179.74935 * 23 22 21 40 40 H 1.08005 * 119.97011 * 0.04236 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8697 -2.0939 -1.3070 6 8 1.3572 -2.8107 -0.2724 7 6 1.3256 -4.2316 -0.4202 8 6 0.7297 -4.8524 0.8169 9 8 0.3682 -4.1473 1.7351 10 7 0.5995 -6.1911 0.9035 11 6 0.0197 -6.7944 2.1060 12 1 -0.6245 -6.1080 2.6555 13 6 -0.6172 -8.1720 1.8582 14 6 0.7648 -8.7772 2.1562 15 8 1.5966 -8.9010 1.0009 16 6 0.7056 -10.0611 2.9861 17 9 -0.0338 -11.0282 2.2968 18 9 2.0035 -10.5353 3.2047 19 9 0.0929 -9.7942 4.2151 20 6 1.0496 -7.5170 2.9903 21 6 2.3325 -2.7450 -2.4416 22 6 2.8537 -2.0144 -3.4914 23 6 2.9140 -0.6350 -3.4128 24 6 2.4528 0.0161 -2.2838 25 1 -0.3933 0.4417 0.7651 26 1 1.7924 -0.5138 0.8900 27 1 3.5346 1.7704 0.0321 28 1 1.5613 2.4680 -1.2085 29 1 0.7185 -4.4933 -1.2869 30 1 2.3399 -4.6050 -0.5611 31 1 0.8890 -6.7549 0.1692 32 1 -1.3783 -8.4393 2.5913 33 1 -0.9471 -8.3219 0.8301 34 1 2.4670 -9.2814 1.1818 35 1 2.0653 -7.1382 2.8764 36 1 0.7442 -7.6054 4.0330 37 1 2.2853 -3.8222 -2.5037 38 1 3.2144 -2.5206 -4.3746 39 1 3.3256 -0.0657 -4.2330 40 1 2.5010 1.0934 -2.2248 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_2989392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:01:43 Heat of formation + Delta-G solvation = -234.026282 kcal Electronic energy + Delta-G solvation = -30821.322908 eV Core-core repulsion = 25768.793644 eV Total energy + Delta-G solvation = -5052.529264 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.106 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -51.25083 -48.79794 -48.72927 -41.84900 -41.32237 -39.96759 -38.47436 -37.49023 -36.45036 -34.30222 -32.95657 -31.40505 -29.82042 -28.37633 -27.19221 -26.68622 -24.43354 -23.53249 -22.57225 -21.91414 -21.02756 -20.07893 -19.54489 -19.47486 -19.35441 -18.42687 -18.28480 -17.49420 -17.42844 -17.09649 -16.89495 -16.79817 -16.10205 -15.76921 -15.73474 -15.56616 -15.46846 -15.24718 -15.17341 -15.04011 -14.93701 -14.90768 -14.77334 -14.67958 -14.09135 -13.97768 -13.84591 -13.73042 -13.55721 -13.06227 -12.94663 -12.74473 -12.64388 -12.21579 -12.01991 -11.93368 -11.82077 -11.25131 -11.07199 -10.28427 -10.26018 -10.10969 -9.33429 -4.96606 0.08447 0.27967 1.28161 1.36173 1.36993 1.50398 1.61461 1.90557 2.35406 2.49881 2.54980 2.58276 2.65172 2.84604 3.36841 3.39002 3.45933 3.50987 3.57623 3.68167 3.85391 3.94402 4.02205 4.06560 4.16043 4.21850 4.22806 4.40255 4.45715 4.46225 4.53825 4.65176 4.70612 4.75905 4.85246 5.15548 5.23235 5.35134 5.37093 5.60636 6.17021 6.24892 6.41546 6.87449 7.05538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.078 4.078 3 Si 0.781 3.219 4 C -0.136 4.136 5 C 0.134 3.866 6 O -0.306 6.306 7 C 0.034 3.966 8 C 0.519 3.481 9 O -0.562 6.562 10 N -0.690 5.690 11 C 0.130 3.870 12 H 0.107 0.893 13 C -0.119 4.119 14 C 0.072 3.928 15 O -0.515 6.515 16 C 0.431 3.569 17 F -0.184 7.184 18 F -0.187 7.187 19 F -0.178 7.178 20 C -0.165 4.165 21 C -0.208 4.208 22 C -0.073 4.073 23 C -0.158 4.158 24 C -0.105 4.105 25 H 0.397 0.603 26 H 0.066 0.934 27 H -0.286 1.286 28 H -0.282 1.282 29 H 0.120 0.880 30 H 0.124 0.876 31 H 0.422 0.578 32 H 0.132 0.868 33 H 0.109 0.891 34 H 0.406 0.594 35 H 0.095 0.905 36 H 0.120 0.880 37 H 0.163 0.837 38 H 0.161 0.839 39 H 0.148 0.852 40 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.920 -2.238 -1.822 3.466 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.187 4.187 3 Si 0.685 3.315 4 C -0.137 4.137 5 C 0.088 3.912 6 O -0.218 6.218 7 C -0.044 4.044 8 C 0.306 3.694 9 O -0.440 6.440 10 N -0.344 5.344 11 C 0.024 3.976 12 H 0.125 0.875 13 C -0.157 4.157 14 C 0.028 3.972 15 O -0.325 6.325 16 C 0.377 3.623 17 F -0.166 7.166 18 F -0.168 7.168 19 F -0.160 7.160 20 C -0.204 4.204 21 C -0.226 4.226 22 C -0.091 4.091 23 C -0.176 4.176 24 C -0.122 4.122 25 H 0.247 0.753 26 H 0.084 0.916 27 H -0.213 1.213 28 H -0.210 1.210 29 H 0.138 0.862 30 H 0.142 0.858 31 H 0.261 0.739 32 H 0.150 0.850 33 H 0.127 0.873 34 H 0.259 0.741 35 H 0.114 0.886 36 H 0.138 0.862 37 H 0.181 0.819 38 H 0.178 0.822 39 H 0.165 0.835 40 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 1.646 -1.190 -2.218 3.008 hybrid contribution 0.765 -1.592 -0.028 1.767 sum 2.411 -2.782 -2.246 4.313 Atomic orbital electron populations 1.86444 1.17616 1.82557 1.50588 1.24835 0.85712 1.11467 0.96638 0.94173 0.77429 0.75169 0.84761 1.19053 1.05673 0.91450 0.97546 1.18967 0.93834 0.90738 0.87641 1.86154 1.77844 1.18730 1.39110 1.22723 1.04612 0.79699 0.97335 1.20384 0.78172 0.82762 0.88123 1.90765 1.49766 1.62360 1.41069 1.45365 1.63284 1.05432 1.20345 1.21591 0.95180 0.94220 0.86621 0.87511 1.23588 0.93002 0.92391 1.06723 1.23597 0.97642 0.87990 0.88012 1.86488 1.31374 1.85577 1.29032 1.21515 0.73545 0.87675 0.79570 1.93211 1.77398 1.66735 1.79220 1.93182 1.38313 1.90234 1.95091 1.93187 1.83267 1.93747 1.45755 1.24239 1.02674 0.92909 1.00580 1.21680 1.05009 1.02144 0.93766 1.21421 0.95455 0.93603 0.98591 1.21370 1.02317 0.95664 0.98253 1.21018 0.98429 0.99319 0.93469 0.75307 0.91588 1.21323 1.20959 0.86235 0.85837 0.73930 0.84951 0.87260 0.74107 0.88602 0.86182 0.81911 0.82152 0.83452 0.85787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.46 12.86 -148.98 -1.92 -6.37 16 2 C -0.08 -0.54 2.37 71.23 0.17 -0.37 16 3 Si 0.78 1.49 30.20 68.60 2.07 3.57 16 4 C -0.14 -1.28 5.30 -19.77 -0.10 -1.38 16 5 C 0.13 0.97 6.66 22.51 0.15 1.12 16 6 O -0.31 -2.50 9.00 -73.39 -0.66 -3.16 16 7 C 0.03 -0.05 5.22 71.24 0.37 0.32 16 8 C 0.52 1.31 7.91 87.66 0.69 2.00 16 9 O -0.56 -7.30 16.10 16.00 0.26 -7.04 16 10 N -0.69 2.99 5.15 -440.03 -2.27 0.72 16 11 C 0.13 -0.51 4.32 45.52 0.20 -0.32 16 12 H 0.11 -0.05 7.47 -2.39 -0.02 -0.07 16 13 C -0.12 0.84 7.01 31.12 0.22 1.05 16 14 C 0.07 -0.44 1.36 -10.27 -0.01 -0.46 16 15 O -0.52 4.29 12.15 -148.98 -1.81 2.48 16 16 C 0.43 -0.92 2.85 71.98 0.21 -0.71 16 17 F -0.18 -0.19 17.18 44.97 0.77 0.58 16 18 F -0.19 0.17 16.65 44.97 0.75 0.92 16 19 F -0.18 0.10 15.75 44.97 0.71 0.81 16 20 C -0.17 0.92 7.15 31.12 0.22 1.14 16 21 C -0.21 -0.16 9.04 22.37 0.20 0.05 16 22 C -0.07 0.02 10.04 22.25 0.22 0.24 16 23 C -0.16 -0.44 10.04 22.28 0.22 -0.21 16 24 C -0.10 -0.76 8.66 22.25 0.19 -0.56 16 25 H 0.40 -0.83 8.74 -74.06 -0.65 -1.47 16 26 H 0.07 0.49 7.83 -2.39 -0.02 0.47 16 27 H -0.29 -1.92 7.11 99.48 0.71 -1.21 16 28 H -0.28 -1.93 6.75 99.48 0.67 -1.26 16 29 H 0.12 -0.82 7.66 -2.39 -0.02 -0.84 16 30 H 0.12 -0.98 7.66 -2.39 -0.02 -1.00 16 31 H 0.42 -3.87 7.60 -92.71 -0.70 -4.57 16 32 H 0.13 -1.15 7.88 -2.39 -0.02 -1.17 16 33 H 0.11 -0.87 8.14 -2.39 -0.02 -0.89 16 34 H 0.41 -5.33 8.42 -74.06 -0.62 -5.95 16 35 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 36 H 0.12 -0.72 7.13 -2.39 -0.02 -0.73 16 37 H 0.16 -1.09 6.30 -2.91 -0.02 -1.11 16 38 H 0.16 -1.07 8.06 -2.91 -0.02 -1.09 16 39 H 0.15 -0.28 8.06 -2.91 -0.02 -0.30 16 40 H 0.12 0.80 4.90 -2.91 -0.01 0.79 16 Total: 0.00 -26.58 350.81 0.03 -26.55 By element: Atomic # 1 Polarization: -20.13 SS G_CDS: -0.82 Total: -20.95 kcal Atomic # 6 Polarization: -1.04 SS G_CDS: 2.95 Total: 1.91 kcal Atomic # 7 Polarization: 2.99 SS G_CDS: -2.27 Total: 0.72 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -4.13 Total: -14.10 kcal Atomic # 9 Polarization: 0.08 SS G_CDS: 2.23 Total: 2.31 kcal Atomic # 14 Polarization: 1.49 SS G_CDS: 2.07 Total: 3.57 kcal Total: -26.58 0.03 -26.55 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_2989392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.481 kcal (2) G-P(sol) polarization free energy of solvation -26.578 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -234.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.032 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.546 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds