Wall clock time and date at job start Thu Mar 4 2021 18:01:55
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 O
2 2 C 1.42906 * 1
3 3 Si 1.86297 * 109.46859 * 2 1
4 4 C 1.50696 * 109.46986 * 239.99929 * 2 1 3
5 5 C 1.38244 * 119.96925 * 119.97955 * 4 2 1
6 6 C 1.38298 * 120.10894 * 179.97438 * 5 4 2
7 7 C 1.38122 * 120.05502 * 359.76552 * 6 5 4
8 8 C 1.38751 * 119.94355 * 0.51523 * 7 6 5
9 9 O 1.35896 * 120.05804 * 179.74334 * 8 7 6
10 10 C 1.42900 * 116.99812 * 359.72064 * 9 8 7
11 11 C 1.53003 * 109.47277 * 180.02562 * 10 9 8
12 12 C 1.50705 * 109.47127 * 179.97438 * 11 10 9
13 13 O 1.21275 * 119.99947 * 0.02562 * 12 11 10
14 14 N 1.34776 * 119.99715 * 180.02562 * 12 11 10
15 15 C 1.46505 * 119.99597 * 180.02562 * 14 12 11
16 16 H 1.08998 * 112.91090 * 23.74977 * 15 14 12
17 17 C 1.53781 * 113.61334 * 154.99978 * 15 14 12
18 18 C 1.53786 * 87.17350 * 89.07333 * 17 15 14
19 19 O 1.42907 * 113.61055 * 270.92744 * 18 17 15
20 20 C 1.52990 * 113.61464 * 140.02626 * 18 17 15
21 21 F 1.39897 * 109.47425 * 59.99764 * 20 18 17
22 22 F 1.39900 * 109.47354 * 179.97438 * 20 18 17
23 23 F 1.39899 * 109.47234 * 299.99577 * 20 18 17
24 24 C 1.53781 * 113.61146 * 252.49455 * 15 14 12
25 25 C 1.38164 * 119.97374 * 300.00099 * 4 2 1
26 26 H 0.96702 * 113.99660 * 59.99945 * 1 2 3
27 27 H 1.08995 * 109.46438 * 119.99848 * 2 1 3
28 28 H 1.48497 * 110.00447 * 298.67770 * 3 2 1
29 29 H 1.48495 * 110.00209 * 60.00240 * 3 2 1
30 30 H 1.07990 * 119.94854 * 0.02562 * 5 4 2
31 31 H 1.07995 * 119.97250 * 180.02562 * 6 5 4
32 32 H 1.07995 * 120.02672 * 180.27070 * 7 6 5
33 33 H 1.09002 * 109.47278 * 59.99972 * 10 9 8
34 34 H 1.09004 * 109.47430 * 300.00214 * 10 9 8
35 35 H 1.09000 * 109.47069 * 60.00494 * 11 10 9
36 36 H 1.08993 * 109.47053 * 299.99877 * 11 10 9
37 37 H 0.96995 * 120.00232 * 359.97438 * 14 12 11
38 38 H 1.09002 * 113.61445 * 203.66333 * 17 15 14
39 39 H 1.09002 * 113.61408 * 334.48063 * 17 15 14
40 40 H 0.96698 * 113.99817 * 179.97438 * 19 18 17
41 41 H 1.09005 * 113.61471 * 25.43638 * 24 15 14
42 42 H 1.08996 * 113.61178 * 156.24980 * 24 15 14
43 43 H 1.08007 * 120.02826 * 0.02562 * 25 4 2
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 8 0.0000 0.0000 0.0000
2 6 1.4291 0.0000 0.0000
3 14 2.0500 1.7565 0.0000
4 6 1.9313 -0.7104 -1.2304
5 6 2.7257 -0.0379 -2.1402
6 6 3.1887 -0.6872 -3.2701
7 6 2.8623 -2.0112 -3.4898
8 6 2.0603 -2.6867 -2.5811
9 8 1.7334 -3.9878 -2.7975
10 6 2.2453 -4.5965 -3.9848
11 6 1.7747 -6.0506 -4.0561
12 6 2.3141 -6.6923 -5.3085
13 8 3.0070 -6.0500 -6.0688
14 7 2.0264 -7.9799 -5.5835
15 6 2.5512 -8.6038 -6.8007
16 1 3.4498 -8.1136 -7.1753
17 6 2.6791 -10.1332 -6.7031
18 6 1.2337 -10.2110 -7.2225
19 8 0.2504 -10.1773 -6.1859
20 6 1.0030 -11.3428 -8.2256
21 9 1.2956 -12.5695 -7.6202
22 9 -0.3335 -11.3344 -8.6391
23 9 1.8357 -11.1598 -9.3348
24 6 1.4829 -8.8409 -7.8812
25 6 1.5972 -2.0332 -1.4485
26 1 -0.3933 0.4417 -0.7651
27 1 1.7923 -0.5138 0.8900
28 1 1.5879 2.4586 -1.2242
29 1 1.5615 2.4679 1.2085
30 1 2.9859 0.9960 -1.9680
31 1 3.8095 -0.1598 -3.9792
32 1 3.2277 -2.5190 -4.3700
33 1 3.3348 -4.5672 -3.9674
34 1 1.8812 -4.0540 -4.8573
35 1 0.6853 -6.0795 -4.0738
36 1 2.1385 -6.5934 -3.1837
37 1 1.4725 -8.4937 -4.9752
38 1 3.4131 -10.5547 -7.3899
39 1 2.7965 -10.4973 -5.6824
40 1 -0.6606 -10.2255 -6.5064
41 1 0.6331 -8.1617 -7.8115
42 1 1.8897 -8.9076 -8.8902
43 1 0.9759 -2.5580 -0.7378
There are 66 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 66
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
m_22_17047570_4549614.mol2 43
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Thu Mar 4 2021 18:01:55
Heat of formation + Delta-G solvation = -246.132915 kcal
Electronic energy + Delta-G solvation = -31756.484634 eV
Core-core repulsion = 26547.892768 eV
Total energy + Delta-G solvation = -5208.591866 eV
No. of doubly occupied orbitals = 66
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 362.122 amu
Computer time = 1.06 seconds
Orbital eigenvalues (eV)
-51.25442 -48.80167 -48.73427 -41.69323 -41.25522 -40.04553 -39.11560 -37.38866
-36.45832 -34.29098 -33.11445 -32.47747 -30.83864 -28.81551 -27.17607 -27.04772
-25.64340 -23.89884 -23.66787 -22.22995 -21.53559 -20.98380 -20.06662 -19.55078
-19.43311 -19.35689 -18.21124 -17.78361 -17.49691 -17.24469 -17.13139 -16.93843
-16.80344 -16.28346 -16.11142 -15.95606 -15.61077 -15.53685 -15.38855 -15.17873
-14.96706 -14.92933 -14.91132 -14.77096 -14.66199 -14.42516 -14.19375 -14.12543
-13.82914 -13.64495 -13.22089 -12.95283 -12.93411 -12.85323 -12.62366 -12.39957
-11.99501 -11.91801 -11.81397 -11.57789 -11.23961 -11.11287 -10.67863 -10.21989
-9.93610 -9.27422 -4.89885 0.19745 0.39241 1.30027 1.45944 1.50414
1.62520 1.65215 1.96764 2.33292 2.48110 2.57980 2.65352 2.66134
2.85004 3.38771 3.40729 3.46200 3.52604 3.56173 3.64601 3.84529
3.89145 3.96189 4.09928 4.23197 4.24031 4.28326 4.39514 4.46305
4.47744 4.55879 4.61924 4.66708 4.67918 4.73480 4.76330 4.78845
4.98348 5.26041 5.38029 5.41850 5.43945 5.70375 6.23275 6.33019
6.44551 6.47147 7.10919
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 O -0.548 6.548
2 C -0.087 4.087
3 Si 0.776 3.224
4 C -0.082 4.082
5 C -0.157 4.157
6 C -0.075 4.075
7 C -0.210 4.210
8 C 0.117 3.883
9 O -0.325 6.325
10 C 0.074 3.926
11 C -0.134 4.134
12 C 0.525 3.475
13 O -0.578 6.578
14 N -0.696 5.696
15 C 0.129 3.871
16 H 0.109 0.891
17 C -0.121 4.121
18 C 0.069 3.931
19 O -0.516 6.516
20 C 0.431 3.569
21 F -0.185 7.185
22 F -0.187 7.187
23 F -0.178 7.178
24 C -0.165 4.165
25 C -0.142 4.142
26 H 0.386 0.614
27 H 0.126 0.874
28 H -0.282 1.282
29 H -0.303 1.303
30 H 0.148 0.852
31 H 0.153 0.847
32 H 0.138 0.862
33 H 0.068 0.932
34 H 0.065 0.935
35 H 0.124 0.876
36 H 0.126 0.874
37 H 0.420 0.580
38 H 0.132 0.868
39 H 0.107 0.893
40 H 0.405 0.595
41 H 0.094 0.906
42 H 0.119 0.881
43 H 0.127 0.873
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 1.656 -0.769 -0.207 1.837
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 O -0.356 6.356
2 C -0.195 4.195
3 Si 0.681 3.319
4 C -0.082 4.082
5 C -0.174 4.174
6 C -0.093 4.093
7 C -0.229 4.229
8 C 0.071 3.929
9 O -0.239 6.239
10 C -0.001 4.001
11 C -0.173 4.173
12 C 0.313 3.687
13 O -0.458 6.458
14 N -0.348 5.348
15 C 0.023 3.977
16 H 0.127 0.873
17 C -0.158 4.158
18 C 0.025 3.975
19 O -0.325 6.325
20 C 0.377 3.623
21 F -0.166 7.166
22 F -0.169 7.169
23 F -0.159 7.159
24 C -0.204 4.204
25 C -0.160 4.160
26 H 0.235 0.765
27 H 0.143 0.857
28 H -0.208 1.208
29 H -0.231 1.231
30 H 0.165 0.835
31 H 0.171 0.829
32 H 0.155 0.845
33 H 0.086 0.914
34 H 0.084 0.916
35 H 0.142 0.858
36 H 0.144 0.856
37 H 0.259 0.741
38 H 0.150 0.850
39 H 0.125 0.875
40 H 0.258 0.742
41 H 0.113 0.887
42 H 0.137 0.863
43 H 0.145 0.855
Dipole moment (debyes) X Y Z Total
from point charges 2.396 0.045 0.272 2.412
hybrid contribution -2.056 -0.971 -1.145 2.546
sum 0.340 -0.926 -0.873 1.317
Atomic orbital electron populations
1.86572 1.18470 1.80465 1.50135 1.25347 0.83508 1.12246 0.98399
0.93901 0.90302 0.71357 0.76376 1.20164 0.97693 0.93496 0.96895
1.21174 1.00273 1.00875 0.95114 1.21253 0.97634 0.93392 0.97037
1.21556 1.03015 0.97061 1.01247 1.19141 0.95264 0.83510 0.94944
1.85954 1.71446 1.22799 1.43725 1.22446 0.99085 0.93065 0.85518
1.21431 1.04855 0.94075 0.96949 1.20575 0.79278 0.81924 0.86931
1.90740 1.39961 1.63496 1.51571 1.45577 1.53103 1.11632 1.24513
1.21583 0.97512 0.93152 0.85446 0.87255 1.23582 0.91172 0.95518
1.05574 1.23673 0.94108 0.91386 0.88290 1.86502 1.19612 1.95609
1.30824 1.21521 0.73865 0.84651 0.82265 1.93210 1.93068 1.47294
1.83041 1.93181 1.35560 1.96710 1.91414 1.93186 1.71951 1.95131
1.55667 1.24277 1.01438 0.93966 1.00682 1.20320 1.03809 0.94666
0.97249 0.76458 0.85672 1.20811 1.23098 0.83478 0.82928 0.84458
0.91389 0.91649 0.85767 0.85604 0.74148 0.85036 0.87488 0.74177
0.88707 0.86250 0.85496
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 O -0.55 -1.99 12.77 -148.98 -1.90 -3.89 16
2 C -0.09 -0.03 2.82 71.23 0.20 0.17 16
3 Si 0.78 -1.47 29.79 68.60 2.04 0.57 16
4 C -0.08 -0.14 5.39 -19.88 -0.11 -0.25 16
5 C -0.16 0.08 8.67 22.29 0.19 0.27 16
6 C -0.08 0.02 10.04 22.26 0.22 0.24 16
7 C -0.21 -0.52 9.04 22.37 0.20 -0.32 16
8 C 0.12 0.57 6.69 22.51 0.15 0.72 16
9 O -0.33 -1.34 10.14 -92.38 -0.94 -2.28 16
10 C 0.07 0.04 4.03 71.98 0.29 0.33 16
11 C -0.13 0.60 6.07 29.85 0.18 0.78 16
12 C 0.53 -0.39 7.83 87.66 0.69 0.30 16
13 O -0.58 -4.30 15.58 -3.01 -0.05 -4.34 16
14 N -0.70 3.57 5.15 -440.03 -2.27 1.30 16
15 C 0.13 -0.62 4.32 45.52 0.20 -0.42 16
16 H 0.11 -0.23 7.47 -2.39 -0.02 -0.25 16
17 C -0.12 0.85 7.00 31.12 0.22 1.07 16
18 C 0.07 -0.41 1.37 -10.18 -0.01 -0.43 16
19 O -0.52 3.87 12.14 -148.98 -1.81 2.06 16
20 C 0.43 -0.81 2.86 71.98 0.21 -0.61 16
21 F -0.18 -0.25 17.18 44.97 0.77 0.52 16
22 F -0.19 0.10 16.65 44.97 0.75 0.85 16
23 F -0.18 0.10 15.77 44.97 0.71 0.81 16
24 C -0.16 0.97 7.16 31.21 0.22 1.19 16
25 C -0.14 -0.67 9.55 22.37 0.21 -0.45 16
26 H 0.39 -0.76 8.70 -74.06 -0.64 -1.40 16
27 H 0.13 -0.14 7.96 -2.39 -0.02 -0.16 16
28 H -0.28 -0.48 7.11 99.48 0.71 0.23 16
29 H -0.30 -1.74 7.11 99.48 0.71 -1.04 16
30 H 0.15 -0.73 4.87 -2.92 -0.01 -0.75 16
31 H 0.15 -0.79 8.06 -2.91 -0.02 -0.82 16
32 H 0.14 0.11 6.30 -2.91 -0.02 0.09 16
33 H 0.07 0.09 7.61 -2.39 -0.02 0.08 16
34 H 0.07 0.11 7.63 -2.39 -0.02 0.09 16
35 H 0.12 -0.94 8.14 -2.39 -0.02 -0.96 16
36 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16
37 H 0.42 -3.60 7.59 -92.71 -0.70 -4.30 16
38 H 0.13 -1.17 7.88 -2.39 -0.02 -1.19 16
39 H 0.11 -0.82 8.14 -2.39 -0.02 -0.84 16
40 H 0.41 -4.95 8.43 -74.06 -0.62 -5.58 16
41 H 0.09 -0.53 8.14 -2.38 -0.02 -0.54 16
42 H 0.12 -0.76 7.15 -2.39 -0.02 -0.78 16
43 H 0.13 0.66 8.06 -2.91 -0.02 0.64 16
Total: 0.00 -19.81 372.47 -0.45 -20.26
By element:
Atomic # 1 Polarization: -17.64 SS G_CDS: -0.82 Total: -18.47 kcal
Atomic # 6 Polarization: -0.45 SS G_CDS: 3.06 Total: 2.61 kcal
Atomic # 7 Polarization: 3.57 SS G_CDS: -2.27 Total: 1.30 kcal
Atomic # 8 Polarization: -3.76 SS G_CDS: -4.69 Total: -8.45 kcal
Atomic # 9 Polarization: -0.06 SS G_CDS: 2.23 Total: 2.17 kcal
Atomic # 14 Polarization: -1.47 SS G_CDS: 2.04 Total: 0.57 kcal
Total: -19.81 -0.45 -20.26 kcal
The number of atoms in the molecule is 43
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
m_22_17047570_4549614.mol2 43
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -225.876 kcal
(2) G-P(sol) polarization free energy of solvation -19.809 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -245.685 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.448 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.257 kcal
(6) G-S(sol) free energy of system = (1) + (5) -246.133 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.06 seconds