Wall clock time and date at job start Thu Mar 4 2021 18:03:10
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
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* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
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Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.50702 * 1
3 3 C 1.33811 * 122.44598 * 2 1
4 4 C 1.50698 * 124.52576 * 359.97438 * 3 2 1
5 5 O 1.42897 * 109.47073 * 113.32601 * 4 3 2
6 6 Si 1.86303 * 109.47540 * 233.32637 * 4 3 2
7 7 S 1.70619 * 110.95323 * 180.02562 * 3 2 1
8 8 C 1.75828 * 91.56190 * 0.02562 * 7 3 2
9 9 C 1.46585 * 125.45769 * 180.02562 * 8 7 3
10 10 O 1.21701 * 119.99903 * 180.02562 * 9 8 7
11 11 N 1.34773 * 119.99924 * 0.02562 * 9 8 7
12 12 C 1.46502 * 120.00094 * 180.02562 * 11 9 8
13 13 H 1.09003 * 112.90239 * 336.24832 * 12 11 9
14 14 C 1.53775 * 113.61908 * 107.50226 * 12 11 9
15 15 C 1.53780 * 87.08388 * 89.11630 * 14 12 11
16 16 O 1.42900 * 113.61545 * 270.88973 * 15 14 12
17 17 C 1.52999 * 113.61797 * 139.97892 * 15 14 12
18 18 F 1.39898 * 109.47260 * 322.51022 * 17 15 14
19 19 F 1.39901 * 109.46777 * 82.50321 * 17 15 14
20 20 F 1.39899 * 109.47314 * 202.50411 * 17 15 14
21 21 C 1.53783 * 113.61563 * 205.00366 * 12 11 9
22 22 C 1.36649 * 109.08627 * 0.26203 * 8 7 3
23 23 H 1.08998 * 109.47145 * 84.90023 * 1 2 3
24 24 H 1.09008 * 109.47246 * 204.89549 * 1 2 3
25 25 H 1.08991 * 109.47458 * 324.89865 * 1 2 3
26 26 H 1.09002 * 109.47365 * 353.32976 * 4 3 2
27 27 H 0.96704 * 114.00253 * 60.00010 * 5 4 3
28 28 H 1.48492 * 110.00079 * 180.02562 * 6 4 3
29 29 H 1.48499 * 109.99936 * 301.32311 * 6 4 3
30 30 H 0.97006 * 120.00298 * 0.02562 * 11 9 8
31 31 H 1.09001 * 113.61306 * 334.56544 * 14 12 11
32 32 H 1.08995 * 113.69449 * 203.67821 * 14 12 11
33 33 H 0.96697 * 113.99728 * 277.49218 * 16 15 14
34 34 H 1.09000 * 113.61666 * 156.33319 * 21 12 11
35 35 H 1.08998 * 113.61268 * 25.42701 * 21 12 11
36 36 H 1.07999 * 123.35112 * 179.73601 * 22 8 7
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5070 0.0000 0.0000
3 6 2.2249 1.1292 0.0000
4 6 1.6354 2.5161 -0.0006
5 8 1.9396 3.1635 1.2365
6 14 2.3584 3.4978 -1.4093
7 16 3.8969 0.7893 -0.0007
8 6 3.5937 -0.9427 -0.0018
9 6 4.6231 -1.9862 -0.0023
10 8 4.3002 -3.1595 -0.0035
11 7 5.9273 -1.6462 -0.0013
12 6 6.9562 -2.6891 -0.0024
13 1 6.5997 -3.6370 0.4006
14 6 7.6910 -2.8282 -1.3460
15 6 8.6828 -1.7758 -0.8231
16 8 8.2980 -0.4311 -1.1162
17 6 10.1391 -2.0714 -1.1874
18 9 10.3670 -3.4499 -1.1159
19 9 10.3945 -1.6235 -2.4879
20 9 10.9871 -1.4113 -0.2917
21 6 8.2977 -2.2316 0.5943
22 6 2.2446 -1.1601 -0.0075
23 1 -0.3633 0.0913 -1.0236
24 1 -0.3634 -0.9322 0.4326
25 1 -0.3634 0.8407 0.5909
26 1 0.5539 2.4512 -0.1203
27 1 2.8865 3.2560 1.4097
28 1 1.7855 4.8677 -1.4204
29 1 3.8357 3.5666 -1.2748
30 1 6.1847 -0.7109 0.0000
31 1 7.1056 -2.4898 -2.2009
32 1 8.1379 -3.8102 -1.5012
33 1 8.5376 -0.1387 -2.0063
34 1 8.9101 -3.0508 0.9710
35 1 8.2020 -1.4114 1.3058
36 1 1.8020 -2.1452 -0.0134
There are 58 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 58
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990)
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
m_22_17047570_6739946.mol2 36
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Thu Mar 4 2021 18:03:10
Heat of formation + Delta-G solvation = -203.524889 kcal
Electronic energy + Delta-G solvation = -27385.493311 eV
Core-core repulsion = 22742.121125 eV
Total energy + Delta-G solvation = -4643.372186 eV
No. of doubly occupied orbitals = 58
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 338.063 amu
Computer time = 0.70 seconds
Orbital eigenvalues (eV)
-51.25509 -48.79754 -48.73463 -41.69930 -40.33120 -39.49653 -37.70929 -36.49178
-34.34308 -32.39645 -29.82695 -28.97518 -27.21515 -26.80153 -24.69732 -23.75356
-22.06593 -21.10830 -20.28080 -20.12858 -19.56732 -19.43513 -19.33043 -17.91338
-17.55066 -17.17874 -17.00616 -16.39477 -16.21703 -15.89195 -15.83279 -15.59955
-15.49568 -15.17928 -15.17001 -14.93143 -14.91711 -14.80984 -14.72668 -14.42423
-14.04397 -13.93369 -13.79360 -13.44054 -13.17301 -13.03999 -12.94885 -12.67277
-12.48594 -12.29409 -11.95776 -11.78085 -11.36152 -11.26227 -10.94817 -10.37667
-9.73732 -9.45134 -5.00328 -0.71008 0.27256 0.68928 1.08346 1.25258
1.48946 1.51800 1.82094 1.87868 2.00292 2.39634 2.55759 2.62948
2.82553 3.25584 3.36211 3.41981 3.49610 3.51859 3.67535 4.08476
4.20265 4.23457 4.41992 4.44212 4.44905 4.52274 4.60462 4.67257
4.73805 4.80784 4.87887 5.01782 5.30104 5.31089 5.41491 6.19066
6.30342 6.30810 6.93665
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.102 4.102
2 C -0.099 4.099
3 C -0.231 4.231
4 C -0.049 4.049
5 O -0.540 6.540
6 Si 0.740 3.260
7 S 0.222 5.778
8 C -0.280 4.280
9 C 0.594 3.406
10 O -0.563 6.563
11 N -0.696 5.696
12 C 0.127 3.873
13 H 0.114 0.886
14 C -0.164 4.164
15 C 0.069 3.931
16 O -0.519 6.519
17 C 0.434 3.566
18 F -0.176 7.176
19 F -0.186 7.186
20 F -0.184 7.184
21 C -0.121 4.121
22 C -0.050 4.050
23 H 0.093 0.907
24 H 0.073 0.927
25 H 0.074 0.926
26 H 0.141 0.859
27 H 0.384 0.616
28 H -0.279 1.279
29 H -0.259 1.259
30 H 0.412 0.588
31 H 0.095 0.905
32 H 0.125 0.875
33 H 0.406 0.594
34 H 0.137 0.863
35 H 0.105 0.895
36 H 0.154 0.846
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -0.683 2.121 -2.435 3.301
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.161 4.161
2 C -0.112 4.112
3 C -0.350 4.350
4 C -0.160 4.160
5 O -0.348 6.348
6 Si 0.641 3.359
7 S 0.492 5.508
8 C -0.401 4.401
9 C 0.382 3.618
10 O -0.444 6.444
11 N -0.348 5.348
12 C 0.021 3.979
13 H 0.132 0.868
14 C -0.202 4.202
15 C 0.025 3.975
16 O -0.328 6.328
17 C 0.379 3.621
18 F -0.158 7.158
19 F -0.167 7.167
20 F -0.165 7.165
21 C -0.159 4.159
22 C -0.084 4.084
23 H 0.111 0.889
24 H 0.092 0.908
25 H 0.093 0.907
26 H 0.159 0.841
27 H 0.233 0.767
28 H -0.205 1.205
29 H -0.184 1.184
30 H 0.250 0.750
31 H 0.114 0.886
32 H 0.143 0.857
33 H 0.259 0.741
34 H 0.155 0.845
35 H 0.123 0.877
36 H 0.171 0.829
Dipole moment (debyes) X Y Z Total
from point charges 0.098 2.919 -2.037 3.561
hybrid contribution 0.077 -0.444 0.358 0.575
sum 0.175 2.475 -1.678 2.996
Atomic orbital electron populations
1.20690 0.87696 1.03686 1.04007 1.18829 0.99155 0.90265 1.02951
1.24570 0.98807 1.01066 1.10567 1.24807 1.06603 0.89494 0.95102
1.86651 1.30552 1.79781 1.37815 0.93923 0.78881 0.78957 0.84171
1.82831 1.02893 0.96869 1.68238 1.24440 0.97877 0.97624 1.20124
1.17125 0.82236 0.87139 0.75318 1.90836 1.82222 1.19627 1.51686
1.45498 1.04192 1.10716 1.74381 1.21672 0.87008 0.92623 0.96556
0.86783 1.24242 0.96549 0.99991 0.99452 1.23624 0.85741 0.86624
1.01546 1.86504 1.81509 1.24624 1.40210 1.21428 0.91682 0.74481
0.74474 1.93189 1.95573 1.31051 1.95973 1.93184 1.95437 1.89073
1.39033 1.93212 1.74308 1.80919 1.68107 1.23614 0.95620 1.03505
0.93136 1.20839 0.91022 1.00515 0.96022 0.88862 0.90788 0.90731
0.84107 0.76675 1.20546 1.18383 0.74993 0.88599 0.85658 0.74077
0.84461 0.87690 0.82879
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.10 0.44 9.48 71.24 0.68 1.12 16
2 C -0.10 0.04 5.78 -21.05 -0.12 -0.08 16
3 C -0.23 0.33 4.83 24.68 0.12 0.45 16
4 C -0.05 0.14 2.77 71.24 0.20 0.34 16
5 O -0.54 -0.21 12.88 -148.98 -1.92 -2.13 16
6 Si 0.74 -3.00 32.13 68.60 2.20 -0.80 16
7 S 0.22 -0.44 20.83 -56.49 -1.18 -1.62 16
8 C -0.28 -0.77 6.45 24.08 0.16 -0.62 16
9 C 0.59 3.20 7.78 86.42 0.67 3.87 16
10 O -0.56 -7.02 16.44 -4.35 -0.07 -7.09 16
11 N -0.70 0.20 5.15 -444.09 -2.29 -2.09 16
12 C 0.13 -0.30 4.32 45.52 0.20 -0.10 16
13 H 0.11 -0.02 7.46 -2.39 -0.02 -0.04 16
14 C -0.16 0.75 7.15 31.12 0.22 0.97 16
15 C 0.07 -0.32 1.36 -10.27 -0.01 -0.34 16
16 O -0.52 3.08 12.14 -148.98 -1.81 1.27 16
17 C 0.43 -0.65 2.85 71.98 0.21 -0.44 16
18 F -0.18 0.07 15.75 44.97 0.71 0.78 16
19 F -0.19 0.07 16.65 44.97 0.75 0.82 16
20 F -0.18 -0.31 17.18 44.97 0.77 0.46 16
21 C -0.12 0.67 7.01 31.12 0.22 0.88 16
22 C -0.05 -0.12 9.78 21.72 0.21 0.09 16
23 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16
24 H 0.07 -0.33 8.11 -2.38 -0.02 -0.35 16
25 H 0.07 -0.34 6.99 -2.39 -0.02 -0.35 16
26 H 0.14 -0.71 6.25 -2.39 -0.01 -0.73 16
27 H 0.38 -1.92 8.70 -74.05 -0.64 -2.56 16
28 H -0.28 -0.70 7.11 99.48 0.71 0.01 16
29 H -0.26 0.39 7.11 99.48 0.71 1.10 16
30 H 0.41 -1.20 6.70 -92.70 -0.62 -1.82 16
31 H 0.10 -0.40 8.14 -2.39 -0.02 -0.41 16
32 H 0.13 -0.74 7.13 -2.39 -0.02 -0.76 16
33 H 0.41 -4.54 8.43 -74.06 -0.62 -5.17 16
34 H 0.14 -1.11 7.88 -2.39 -0.02 -1.13 16
35 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16
36 H 0.15 0.39 8.06 -2.91 -0.02 0.36 16
Total: 0.00 -16.70 333.05 -0.75 -17.45
By element:
Atomic # 1 Polarization: -12.53 SS G_CDS: -0.66 Total: -13.19 kcal
Atomic # 6 Polarization: 3.40 SS G_CDS: 2.74 Total: 6.14 kcal
Atomic # 7 Polarization: 0.20 SS G_CDS: -2.29 Total: -2.09 kcal
Atomic # 8 Polarization: -4.16 SS G_CDS: -3.80 Total: -7.96 kcal
Atomic # 9 Polarization: -0.17 SS G_CDS: 2.23 Total: 2.06 kcal
Atomic # 14 Polarization: -3.00 SS G_CDS: 2.20 Total: -0.80 kcal
Atomic # 16 Polarization: -0.44 SS G_CDS: -1.18 Total: -1.62 kcal
Total: -16.70 -0.75 -17.45 kcal
The number of atoms in the molecule is 36
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
m_22_17047570_6739946.mol2 36
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -186.071 kcal
(2) G-P(sol) polarization free energy of solvation -16.704 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -202.774 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.751 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.454 kcal
(6) G-S(sol) free energy of system = (1) + (5) -203.525 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.71 seconds