Wall clock time and date at job start Thu Mar 4 2021 18:03:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37932 * 120.07489 * 2 1 4 4 C 1.38388 * 120.14401 * 179.97438 * 3 2 1 5 5 C 1.50703 * 119.85273 * 179.97438 * 4 3 2 6 6 C 1.38332 * 120.29565 * 359.97438 * 4 3 2 7 7 C 1.50693 * 119.93021 * 179.97438 * 6 4 3 8 8 O 1.42903 * 109.47075 * 74.99863 * 7 6 4 9 9 Si 1.86305 * 109.47239 * 194.99828 * 7 6 4 10 10 C 1.37988 * 120.14215 * 359.73974 * 6 4 3 11 11 C 1.39550 * 119.85154 * 0.52861 * 10 6 4 12 12 C 1.47844 * 120.14347 * 179.74665 * 11 10 6 13 13 O 1.21556 * 120.00088 * 173.74764 * 12 11 10 14 14 N 1.34777 * 120.00229 * 353.74440 * 12 11 10 15 15 C 1.46494 * 120.00100 * 179.97438 * 14 12 11 16 16 H 1.09002 * 112.90941 * 23.75350 * 15 14 12 17 17 C 1.53776 * 113.61525 * 155.00285 * 15 14 12 18 18 C 1.53780 * 87.17596 * 89.15999 * 17 15 14 19 19 O 1.42904 * 113.61134 * 270.76208 * 18 17 15 20 20 C 1.52998 * 113.61668 * 139.94240 * 18 17 15 21 21 F 1.39900 * 109.47158 * 60.00320 * 20 18 17 22 22 F 1.39899 * 109.47109 * 179.97438 * 20 18 17 23 23 F 1.39899 * 109.47027 * 300.00180 * 20 18 17 24 24 C 1.53782 * 87.07810 * 25.39338 * 18 17 15 25 25 H 1.09000 * 109.46448 * 263.42660 * 1 2 3 26 26 H 1.08992 * 109.46935 * 23.42533 * 1 2 3 27 27 H 1.08995 * 109.47381 * 143.43235 * 1 2 3 28 28 H 1.08000 * 119.93064 * 359.97438 * 3 2 1 29 29 H 1.09004 * 109.46845 * 90.00180 * 5 4 3 30 30 H 1.08993 * 109.46929 * 210.00583 * 5 4 3 31 31 H 1.08998 * 109.46917 * 330.00945 * 5 4 3 32 32 H 1.09003 * 109.47108 * 314.99535 * 7 6 4 33 33 H 0.96692 * 113.99856 * 59.99906 * 8 7 6 34 34 H 1.48500 * 110.00095 * 58.67927 * 9 7 6 35 35 H 1.48497 * 109.99940 * 179.97438 * 9 7 6 36 36 H 1.08001 * 120.07281 * 180.25602 * 10 6 4 37 37 H 0.96995 * 119.99580 * 0.02562 * 14 12 11 38 38 H 1.09007 * 113.61506 * 334.56976 * 17 15 14 39 39 H 1.09006 * 113.62019 * 203.75116 * 17 15 14 40 40 H 0.96707 * 113.99597 * 179.97438 * 19 18 17 41 41 H 1.08997 * 113.61334 * 89.11890 * 24 18 17 42 42 H 1.09002 * 113.61005 * 220.01919 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5821 1.1953 0.0005 5 6 4.3307 2.5033 -0.0001 6 6 4.2814 0.0017 0.0016 7 6 5.7883 0.0132 0.0016 8 8 6.2620 0.3667 1.3027 9 14 6.4222 -1.6791 -0.4514 10 6 3.6021 -1.1993 0.0076 11 6 2.2066 -1.2081 0.0014 12 6 1.4722 -2.4913 0.0020 13 8 0.2616 -2.4986 0.1113 14 7 2.1450 -3.6529 -0.1185 15 6 1.4173 -4.9243 -0.1173 16 1 0.3767 -4.8179 -0.4238 17 6 2.1598 -6.0597 -0.8415 18 6 2.8263 -6.3811 0.5065 19 8 4.0431 -5.6653 0.7285 20 6 2.9601 -7.8801 0.7822 21 9 3.7379 -8.4708 -0.2194 22 9 3.5749 -8.0728 2.0240 23 9 1.6903 -8.4672 0.7938 24 6 1.6003 -5.7384 1.1765 25 1 -0.3632 -0.1176 1.0209 26 1 -0.3633 0.9429 -0.4085 27 1 -0.3634 -0.8253 -0.6122 28 1 1.6583 2.1290 -0.0004 29 1 4.5108 2.8192 1.0275 30 1 5.2837 2.3762 -0.5135 31 1 3.7389 3.2603 -0.5145 32 1 6.1461 0.7419 -0.7258 33 1 5.9812 -0.2397 2.0016 34 1 5.9106 -2.0719 -1.7891 35 1 7.9071 -1.6809 -0.4556 36 1 4.1491 -2.1305 0.0126 37 1 3.1110 -3.6470 -0.2054 38 1 2.8583 -5.7095 -1.6015 39 1 1.5024 -6.8504 -1.2031 40 1 4.4668 -5.8629 1.5750 41 1 0.7889 -6.4407 1.3674 42 1 1.8473 -5.1289 2.0458 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_9599494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:22 Heat of formation + Delta-G solvation = -207.932584 kcal Electronic energy + Delta-G solvation = -31657.267727 eV Core-core repulsion = 26769.014544 eV Total energy + Delta-G solvation = -4888.253183 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.122 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -51.19171 -48.73711 -48.67234 -41.90887 -40.92436 -39.58790 -37.60059 -36.41976 -34.62082 -34.38273 -32.95542 -29.50686 -28.88054 -28.18780 -27.12126 -25.62971 -24.31398 -23.63673 -22.55658 -21.14700 -20.81537 -20.01381 -19.48703 -19.36419 -18.94807 -17.52812 -17.47541 -17.00194 -16.64915 -16.41785 -16.27755 -16.15931 -15.80445 -15.58438 -15.52663 -15.31734 -15.11548 -14.95315 -14.85304 -14.83131 -14.63093 -14.61589 -14.54843 -14.13633 -13.93890 -13.84936 -13.62168 -13.40432 -13.07379 -12.95659 -12.73863 -12.66291 -12.56182 -12.45298 -12.16229 -11.86507 -11.81951 -11.17284 -10.73789 -10.42612 -10.21707 -9.89106 -9.61677 -5.05312 -0.25744 0.17456 1.28076 1.56462 1.60585 1.72779 1.94738 1.96900 2.48406 2.62823 2.64305 2.71741 2.90886 3.42884 3.45688 3.47225 3.57421 3.59631 3.65723 3.74193 3.81792 4.14764 4.19674 4.28911 4.44709 4.50164 4.51772 4.53845 4.58171 4.68315 4.71402 4.76076 4.78503 4.81590 4.83463 4.91567 5.04571 5.12526 5.25872 5.45197 5.49428 5.53623 5.80576 6.33928 6.48302 6.77070 7.13738 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.024 4.024 3 C -0.138 4.138 4 C -0.031 4.031 5 C -0.120 4.120 6 C -0.141 4.141 7 C -0.067 4.067 8 O -0.549 6.549 9 Si 0.757 3.243 10 C -0.063 4.063 11 C -0.159 4.159 12 C 0.562 3.438 13 O -0.557 6.557 14 N -0.696 5.696 15 C 0.129 3.871 16 H 0.111 0.889 17 C -0.124 4.124 18 C 0.071 3.929 19 O -0.515 6.515 20 C 0.432 3.568 21 F -0.185 7.185 22 F -0.186 7.186 23 F -0.179 7.179 24 C -0.163 4.163 25 H 0.072 0.928 26 H 0.072 0.928 27 H 0.080 0.920 28 H 0.145 0.855 29 H 0.082 0.918 30 H 0.071 0.929 31 H 0.077 0.923 32 H 0.112 0.888 33 H 0.394 0.606 34 H -0.283 1.283 35 H -0.295 1.295 36 H 0.150 0.850 37 H 0.414 0.586 38 H 0.104 0.896 39 H 0.132 0.868 40 H 0.408 0.592 41 H 0.120 0.880 42 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.196 0.051 1.376 1.824 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.025 4.025 3 C -0.155 4.155 4 C -0.032 4.032 5 C -0.176 4.176 6 C -0.141 4.141 7 C -0.177 4.177 8 O -0.357 6.357 9 Si 0.663 3.337 10 C -0.081 4.081 11 C -0.162 4.162 12 C 0.351 3.649 13 O -0.437 6.437 14 N -0.349 5.349 15 C 0.023 3.977 16 H 0.129 0.871 17 C -0.162 4.162 18 C 0.027 3.973 19 O -0.325 6.325 20 C 0.377 3.623 21 F -0.167 7.167 22 F -0.167 7.167 23 F -0.160 7.160 24 C -0.202 4.202 25 H 0.090 0.910 26 H 0.090 0.910 27 H 0.098 0.902 28 H 0.163 0.837 29 H 0.101 0.899 30 H 0.090 0.910 31 H 0.096 0.904 32 H 0.129 0.871 33 H 0.244 0.756 34 H -0.209 1.209 35 H -0.223 1.223 36 H 0.167 0.833 37 H 0.253 0.747 38 H 0.123 0.877 39 H 0.150 0.850 40 H 0.261 0.739 41 H 0.138 0.862 42 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 0.966 0.245 -0.002 0.997 hybrid contribution 0.543 -0.109 0.390 0.677 sum 1.509 0.136 0.388 1.564 Atomic orbital electron populations 1.21034 0.89971 1.03250 1.03227 1.20221 0.97040 0.91874 0.93323 1.21186 0.93605 0.98106 1.02651 1.20216 0.93538 0.95866 0.93560 1.20936 1.00054 0.93126 1.03476 1.20177 0.96521 0.92836 1.04564 1.25082 0.91136 1.12002 0.89475 1.86487 1.75962 1.56746 1.16470 0.94156 0.77665 0.78376 0.83514 1.21182 0.92498 0.97805 0.96649 1.19654 0.93696 0.92840 1.09992 1.18372 0.86758 0.84176 0.75597 1.90743 1.14837 1.87470 1.50684 1.45546 1.11459 1.04235 1.73656 1.21642 0.97712 0.82325 0.95985 0.87092 1.23606 0.99182 0.99093 0.94312 1.23583 0.88499 0.83106 1.02113 1.86493 1.35438 1.65139 1.45432 1.21516 0.73667 0.93073 0.74006 1.93210 1.75556 1.86574 1.61325 1.93183 1.83327 1.96304 1.43886 1.93185 1.40289 1.86379 1.96172 1.24255 0.96621 0.99898 0.99398 0.90963 0.90960 0.90192 0.83745 0.89935 0.91043 0.90420 0.87093 0.75579 1.20921 1.22313 0.83259 0.74691 0.87707 0.84969 0.73866 0.86175 0.88317 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.41 8.74 71.24 0.62 0.21 16 2 C -0.02 -0.07 5.91 -19.61 -0.12 -0.19 16 3 C -0.14 -0.10 9.31 22.23 0.21 0.11 16 4 C -0.03 0.00 5.89 -19.81 -0.12 -0.12 16 5 C -0.12 0.27 9.53 71.24 0.68 0.94 16 6 C -0.14 0.19 5.25 -19.90 -0.10 0.09 16 7 C -0.07 0.18 2.04 71.23 0.15 0.32 16 8 O -0.55 1.36 12.80 -148.98 -1.91 -0.54 16 9 Si 0.76 -2.91 29.92 68.60 2.05 -0.86 16 10 C -0.06 0.15 8.13 22.53 0.18 0.33 16 11 C -0.16 -0.30 5.87 -20.09 -0.12 -0.42 16 12 C 0.56 1.74 7.70 86.79 0.67 2.41 16 13 O -0.56 -5.08 12.94 -3.89 -0.05 -5.13 16 14 N -0.70 1.93 5.11 -442.64 -2.26 -0.33 16 15 C 0.13 -0.53 4.33 45.58 0.20 -0.33 16 16 H 0.11 -0.18 7.47 -2.39 -0.02 -0.20 16 17 C -0.12 0.83 7.00 31.12 0.22 1.05 16 18 C 0.07 -0.46 1.36 -10.27 -0.01 -0.47 16 19 O -0.52 4.65 12.16 -148.98 -1.81 2.84 16 20 C 0.43 -1.11 2.85 71.98 0.21 -0.91 16 21 F -0.19 -0.15 17.18 44.97 0.77 0.62 16 22 F -0.19 0.30 16.65 44.97 0.75 1.05 16 23 F -0.18 0.18 15.75 44.97 0.71 0.88 16 24 C -0.16 1.02 7.15 31.18 0.22 1.24 16 25 H 0.07 0.31 8.14 -2.39 -0.02 0.29 16 26 H 0.07 0.02 8.04 -2.39 -0.02 0.00 16 27 H 0.08 0.57 5.85 -2.39 -0.01 0.55 16 28 H 0.14 -0.36 8.06 -2.91 -0.02 -0.38 16 29 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.07 -0.15 6.22 -2.39 -0.01 -0.16 16 31 H 0.08 -0.31 8.08 -2.39 -0.02 -0.33 16 32 H 0.11 -0.19 6.48 -2.39 -0.02 -0.21 16 33 H 0.39 -4.00 8.70 -74.06 -0.64 -4.64 16 34 H -0.28 -0.33 7.11 99.48 0.71 0.38 16 35 H -0.30 -1.12 7.11 99.48 0.71 -0.41 16 36 H 0.15 -1.17 3.53 -2.91 -0.01 -1.18 16 37 H 0.41 -2.59 5.68 -92.71 -0.53 -3.12 16 38 H 0.10 -0.73 8.14 -2.38 -0.02 -0.75 16 39 H 0.13 -1.14 7.88 -2.38 -0.02 -1.16 16 40 H 0.41 -5.96 8.42 -74.05 -0.62 -6.58 16 41 H 0.12 -0.82 7.13 -2.39 -0.02 -0.84 16 42 H 0.10 -0.62 8.14 -2.39 -0.02 -0.64 16 Total: 0.00 -17.29 351.89 0.50 -16.78 By element: Atomic # 1 Polarization: -18.96 SS G_CDS: -0.63 Total: -19.59 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: 2.88 Total: 4.27 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -2.26 Total: -0.33 kcal Atomic # 8 Polarization: 0.94 SS G_CDS: -3.77 Total: -2.83 kcal Atomic # 9 Polarization: 0.33 SS G_CDS: 2.23 Total: 2.56 kcal Atomic # 14 Polarization: -2.91 SS G_CDS: 2.05 Total: -0.86 kcal Total: -17.29 0.50 -16.78 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_9599494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -191.149 kcal (2) G-P(sol) polarization free energy of solvation -17.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -208.436 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.504 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.784 kcal (6) G-S(sol) free energy of system = (1) + (5) -207.933 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds