Wall clock time and date at job start Thu Mar 4 2021 18:03:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86304 * 109.47115 * 2 1 4 4 C 1.50707 * 109.46988 * 119.99681 * 2 1 3 5 5 C 1.36451 * 120.29445 * 120.00374 * 4 2 1 6 6 C 1.40092 * 119.25006 * 180.23434 * 5 4 2 7 7 C 1.40851 * 132.85810 * 180.37923 * 6 5 4 8 8 C 1.46571 * 126.58404 * 359.34876 * 7 6 5 9 9 O 1.21726 * 119.99817 * 0.25655 * 8 7 6 10 10 N 1.34774 * 120.00295 * 180.24942 * 8 7 6 11 11 C 1.46504 * 119.99956 * 180.02562 * 10 8 7 12 12 H 1.09003 * 112.84913 * 334.66808 * 11 10 8 13 13 C 1.53778 * 113.61713 * 105.86396 * 11 10 8 14 14 C 1.53946 * 87.01999 * 139.95017 * 13 11 10 15 15 O 1.42905 * 113.61358 * 89.20078 * 14 13 11 16 16 C 1.52999 * 113.66713 * 220.06738 * 14 13 11 17 17 F 1.39904 * 109.47275 * 157.56197 * 16 14 13 18 18 F 1.39901 * 109.47057 * 277.56023 * 16 14 13 19 19 F 1.39895 * 109.47328 * 37.56077 * 16 14 13 20 20 C 1.53778 * 113.61109 * 203.47283 * 11 10 8 21 21 C 1.40552 * 106.84146 * 179.58170 * 7 6 5 22 22 N 1.30742 * 108.74246 * 359.77191 * 21 7 6 23 23 N 1.36573 * 120.23263 * 359.50537 * 6 5 4 24 24 C 1.36237 * 120.07940 * 0.49481 * 23 6 5 25 25 C 1.35185 * 120.70698 * 359.74316 * 24 23 6 26 26 H 0.96691 * 114.00067 * 299.99996 * 1 2 3 27 27 H 1.08998 * 109.47394 * 239.99527 * 2 1 3 28 28 H 1.48500 * 109.99872 * 178.67621 * 3 2 1 29 29 H 1.48498 * 109.99719 * 299.99499 * 3 2 1 30 30 H 1.08002 * 120.37098 * 359.94991 * 5 4 2 31 31 H 0.97000 * 119.99721 * 0.02562 * 10 8 7 32 32 H 1.09002 * 113.61373 * 254.53273 * 13 11 10 33 33 H 1.08999 * 113.61127 * 25.42807 * 13 11 10 34 34 H 0.96698 * 114.00007 * 82.46448 * 15 14 13 35 35 H 1.08996 * 113.61495 * 334.56011 * 20 11 10 36 36 H 1.08998 * 113.61548 * 105.39097 * 20 11 10 37 37 H 1.08000 * 125.63235 * 179.72766 * 21 7 6 38 38 H 1.08000 * 119.64861 * 179.76179 * 24 23 6 39 39 H 1.07997 * 119.84228 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2306 5 6 2.7163 -1.8203 1.1124 6 6 3.1670 -2.4664 2.2709 7 6 3.9755 -3.6002 2.4825 8 6 4.5763 -4.4497 1.4502 9 8 4.3968 -4.1965 0.2732 10 7 5.3276 -5.5111 1.8042 11 6 5.9285 -6.3599 0.7723 12 1 5.3820 -6.3315 -0.1704 13 6 7.4442 -6.1552 0.6119 14 6 7.5515 -7.6818 0.4447 15 8 7.4187 -8.1201 -0.9090 16 6 8.7630 -8.2934 1.1511 17 9 8.5264 -9.6512 1.3915 18 9 9.8949 -8.1536 0.3408 19 9 8.9756 -7.6347 2.3668 20 6 6.2490 -7.7841 1.2559 21 6 4.0912 -3.7638 3.8737 22 7 3.4181 -2.8123 4.4660 23 7 2.8313 -1.9824 3.5030 24 6 2.0472 -0.8735 3.6107 25 6 1.5969 -0.2366 2.5065 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5139 -0.8899 28 1 3.5346 1.7703 0.0322 29 1 1.5616 2.4678 -1.2086 30 1 2.9831 -2.1990 0.1368 31 1 5.4704 -5.7131 2.7421 32 1 7.7170 -5.5967 -0.2835 33 1 7.9315 -5.7792 1.5114 34 1 8.2346 -8.0582 -1.4243 35 1 6.4091 -7.8542 2.3317 36 1 5.5575 -8.5385 0.8807 37 1 4.6441 -4.5468 4.3713 38 1 1.7828 -0.4990 4.5885 39 1 0.9765 0.6415 2.6081 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_11618758.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:45 Heat of formation + Delta-G solvation = -130.241828 kcal Electronic energy + Delta-G solvation = -31648.089362 eV Core-core repulsion = 26531.438619 eV Total energy + Delta-G solvation = -5116.650743 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.097 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -51.27150 -48.81380 -48.74592 -43.31309 -41.36844 -39.84857 -39.24780 -37.20566 -36.61000 -34.36477 -33.94997 -32.09139 -30.42652 -28.76519 -27.28115 -27.19191 -25.24356 -24.38523 -23.34268 -22.89991 -21.58643 -21.15328 -20.00602 -19.56968 -19.47349 -19.09482 -18.46907 -17.86185 -17.56333 -17.24616 -16.99822 -16.81932 -16.42108 -16.28211 -15.85985 -15.73810 -15.59433 -15.39160 -15.37190 -15.19044 -15.11443 -14.92623 -14.89108 -14.51546 -14.46992 -14.24566 -14.02991 -13.88480 -13.67594 -13.49224 -13.28038 -13.13778 -12.50276 -12.40131 -12.23152 -12.00049 -11.95022 -11.57421 -11.38205 -11.01890 -10.78505 -10.26256 -10.20496 -8.81346 -5.07160 -0.57474 -0.10602 0.98749 1.04694 1.20515 1.42784 1.67941 1.96067 2.06565 2.16334 2.36581 2.45831 2.55768 2.64164 2.83779 3.08771 3.23814 3.34860 3.45925 3.46651 3.49705 3.60737 3.74410 3.87629 3.93439 4.10001 4.20422 4.36495 4.38649 4.40596 4.43251 4.62332 4.63978 4.75276 4.77445 4.93709 5.10088 5.16591 5.28120 5.41591 5.67649 6.25577 6.28368 6.53335 6.77166 7.22562 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.077 4.077 3 Si 0.816 3.184 4 C -0.053 4.053 5 C -0.135 4.135 6 C 0.152 3.848 7 C -0.348 4.348 8 C 0.601 3.399 9 O -0.592 6.592 10 N -0.703 5.703 11 C 0.141 3.859 12 H 0.105 0.895 13 C -0.165 4.165 14 C 0.069 3.931 15 O -0.522 6.522 16 C 0.437 3.563 17 F -0.182 7.182 18 F -0.186 7.186 19 F -0.173 7.173 20 C -0.119 4.119 21 C 0.132 3.868 22 N -0.338 5.338 23 N -0.273 5.273 24 C 0.115 3.885 25 C -0.146 4.146 26 H 0.401 0.599 27 H 0.105 0.895 28 H -0.303 1.303 29 H -0.290 1.290 30 H 0.138 0.862 31 H 0.417 0.583 32 H 0.092 0.908 33 H 0.119 0.881 34 H 0.404 0.596 35 H 0.134 0.866 36 H 0.104 0.896 37 H 0.235 0.765 38 H 0.214 0.786 39 H 0.222 0.778 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.532 4.911 5.806 8.015 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.185 4.185 3 Si 0.719 3.281 4 C -0.059 4.059 5 C -0.155 4.155 6 C 0.030 3.970 7 C -0.363 4.363 8 C 0.391 3.609 9 O -0.474 6.474 10 N -0.354 5.354 11 C 0.036 3.964 12 H 0.123 0.877 13 C -0.204 4.204 14 C 0.025 3.975 15 O -0.331 6.331 16 C 0.383 3.617 17 F -0.164 7.164 18 F -0.167 7.167 19 F -0.155 7.155 20 C -0.156 4.156 21 C -0.048 4.048 22 N -0.158 5.158 23 N -0.037 5.037 24 C -0.010 4.010 25 C -0.166 4.166 26 H 0.252 0.748 27 H 0.123 0.877 28 H -0.230 1.230 29 H -0.217 1.217 30 H 0.155 0.845 31 H 0.255 0.745 32 H 0.110 0.890 33 H 0.137 0.863 34 H 0.257 0.743 35 H 0.152 0.848 36 H 0.122 0.878 37 H 0.251 0.749 38 H 0.231 0.769 39 H 0.238 0.762 Dipole moment (debyes) X Y Z Total from point charges -2.974 5.628 5.470 8.393 hybrid contribution 1.658 -1.520 -1.069 2.491 sum -1.317 4.108 4.401 6.162 Atomic orbital electron populations 1.86586 1.15919 1.82279 1.50754 1.25328 0.85988 1.11193 0.95969 0.93865 0.76904 0.72250 0.85048 1.20777 0.94046 0.93568 0.97542 1.20646 1.01087 0.96554 0.97248 1.19473 0.95985 0.94599 0.86931 1.19672 1.17598 1.04684 0.94316 1.17076 0.76988 0.79901 0.86892 1.90767 1.63332 1.72946 1.20344 1.45442 1.51625 1.27855 1.10517 1.22070 0.92311 0.89127 0.92931 0.87692 1.24291 0.97845 0.92638 1.05640 1.23240 0.92719 0.96106 0.85474 1.86622 1.40278 1.87217 1.18942 1.21278 0.85539 0.76766 0.78149 1.93217 1.94373 1.34196 1.94591 1.93184 1.55078 1.95540 1.72912 1.93185 1.95431 1.80605 1.46254 1.23580 0.93139 0.97566 1.01349 1.24606 0.93413 0.95821 0.91005 1.77564 1.19598 1.07236 1.11407 1.46384 1.32519 1.19725 1.05069 1.22475 0.90564 0.83903 1.04090 1.21354 1.03480 1.03572 0.88201 0.74779 0.87719 1.23044 1.21746 0.84459 0.74541 0.88985 0.86288 0.74306 0.84846 0.87780 0.74858 0.76942 0.76151 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.05 12.88 -148.98 -1.92 0.14 16 2 C -0.08 0.23 2.84 71.24 0.20 0.44 16 3 Si 0.82 -4.51 31.96 68.60 2.19 -2.32 16 4 C -0.05 0.11 4.53 -19.81 -0.09 0.02 16 5 C -0.14 -0.76 9.35 22.30 0.21 -0.56 16 6 C 0.15 1.02 6.76 39.49 0.27 1.29 16 7 C -0.35 -2.01 6.17 -19.90 -0.12 -2.13 16 8 C 0.60 4.43 7.78 86.42 0.67 5.10 16 9 O -0.59 -9.18 15.32 -4.43 -0.07 -9.25 16 10 N -0.70 0.58 5.35 -444.08 -2.38 -1.80 16 11 C 0.14 -0.04 4.15 45.52 0.19 0.15 16 12 H 0.11 0.55 7.50 -2.39 -0.02 0.53 16 13 C -0.17 0.36 7.16 31.18 0.22 0.59 16 14 C 0.07 -0.14 1.36 -10.21 -0.01 -0.15 16 15 O -0.52 0.31 13.42 -148.98 -2.00 -1.69 16 16 C 0.44 -0.02 2.85 71.98 0.21 0.19 16 17 F -0.18 -0.53 17.18 44.97 0.77 0.25 16 18 F -0.19 -0.26 16.65 44.97 0.75 0.49 16 19 F -0.17 0.07 15.76 44.97 0.71 0.78 16 20 C -0.12 0.48 7.01 31.12 0.22 0.70 16 21 C 0.13 0.05 11.44 85.42 0.98 1.03 16 22 N -0.34 -1.30 12.57 -56.62 -0.71 -2.01 16 23 N -0.27 -0.77 3.86 -187.29 -0.72 -1.49 16 24 C 0.12 -0.69 11.17 83.30 0.93 0.25 16 25 C -0.15 1.39 8.38 22.03 0.18 1.57 16 26 H 0.40 -5.98 8.08 -74.06 -0.60 -6.58 16 27 H 0.11 0.05 7.71 -2.39 -0.02 0.03 16 28 H -0.30 -0.77 7.11 99.48 0.71 -0.06 16 29 H -0.29 -0.52 7.11 99.48 0.71 0.18 16 30 H 0.14 1.30 7.01 -2.91 -0.02 1.28 16 31 H 0.42 -3.30 7.63 -92.71 -0.71 -4.00 16 32 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 33 H 0.12 -0.51 7.14 -2.39 -0.02 -0.52 16 34 H 0.40 -2.68 8.42 -74.06 -0.62 -3.31 16 35 H 0.13 -1.15 7.85 -2.39 -0.02 -1.17 16 36 H 0.10 -0.35 8.14 -2.39 -0.02 -0.37 16 37 H 0.24 -2.24 7.46 -2.91 -0.02 -2.26 16 38 H 0.21 -2.86 8.06 -2.91 -0.02 -2.89 16 39 H 0.22 -4.69 7.31 -2.91 -0.02 -4.72 16 Total: 0.00 -32.35 350.58 -0.03 -32.39 By element: Atomic # 1 Polarization: -23.24 SS G_CDS: -0.71 Total: -23.96 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 4.05 Total: 8.46 kcal Atomic # 7 Polarization: -1.48 SS G_CDS: -3.81 Total: -5.30 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -3.98 Total: -10.80 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 2.23 Total: 1.51 kcal Atomic # 14 Polarization: -4.51 SS G_CDS: 2.19 Total: -2.32 kcal Total: -32.35 -0.03 -32.39 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_11618758.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.856 kcal (2) G-P(sol) polarization free energy of solvation -32.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.035 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.386 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds