Wall clock time and date at job start Thu Mar 4 2021 18:03:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35655 * 117.00079 * 2 1 4 4 C 1.38402 * 120.12256 * 359.97438 * 3 2 1 5 5 C 1.38728 * 120.02981 * 180.02562 * 4 3 2 6 6 O 1.35708 * 119.85815 * 180.02562 * 5 4 3 7 7 C 1.42902 * 117.00284 * 359.97438 * 6 5 4 8 8 C 1.39137 * 120.27669 * 359.97438 * 5 4 3 9 9 C 1.50702 * 119.88016 * 180.02562 * 8 5 4 10 10 O 1.42892 * 109.47242 * 74.99819 * 9 8 5 11 11 Si 1.86298 * 109.46915 * 195.00358 * 9 8 5 12 12 C 1.37586 * 120.24038 * 0.29714 * 8 5 4 13 13 C 1.39824 * 119.96258 * 359.45960 * 12 8 5 14 14 C 1.47303 * 120.13375 * 180.29442 * 13 12 8 15 15 O 1.21620 * 119.99938 * 180.22735 * 14 13 12 16 16 N 1.34771 * 120.00153 * 0.22035 * 14 13 12 17 17 C 1.46503 * 120.00033 * 180.02562 * 16 14 13 18 18 H 1.08992 * 112.85074 * 23.79981 * 17 16 14 19 19 C 1.53778 * 113.61468 * 155.00069 * 17 16 14 20 20 C 1.53780 * 87.08274 * 139.97797 * 19 17 16 21 21 O 1.42902 * 113.61648 * 89.19713 * 20 19 17 22 22 C 1.53000 * 113.61719 * 220.02207 * 20 19 17 23 23 F 1.39891 * 109.47404 * 59.99586 * 22 20 19 24 24 F 1.39903 * 109.47312 * 180.02562 * 22 20 19 25 25 F 1.39906 * 109.46732 * 299.99387 * 22 20 19 26 26 C 1.53781 * 87.08282 * 334.56665 * 20 19 17 27 27 H 1.09004 * 109.47084 * 300.00212 * 1 2 3 28 28 H 1.08992 * 109.47133 * 59.99973 * 1 2 3 29 29 H 1.09002 * 109.47401 * 180.02562 * 1 2 3 30 30 H 1.07999 * 119.98020 * 0.02562 * 4 3 2 31 31 H 1.09001 * 109.47031 * 299.99927 * 7 6 5 32 32 H 1.09000 * 109.47219 * 60.00031 * 7 6 5 33 33 H 1.08999 * 109.47048 * 180.02562 * 7 6 5 34 34 H 1.09000 * 109.46724 * 314.99865 * 9 8 5 35 35 H 0.96703 * 114.00176 * 180.02562 * 10 9 8 36 36 H 1.48506 * 109.99834 * 178.68053 * 11 9 8 37 37 H 1.48502 * 110.00011 * 299.99318 * 11 9 8 38 38 H 1.08004 * 120.02032 * 179.70419 * 12 8 5 39 39 H 0.97003 * 119.99941 * 0.02562 * 16 14 13 40 40 H 1.08999 * 113.61689 * 254.52416 * 19 17 16 41 41 H 1.09000 * 113.61373 * 25.35019 * 19 17 16 42 42 H 0.96700 * 114.00091 * 180.02562 * 21 20 19 43 43 H 1.09003 * 113.61804 * 270.88369 * 26 20 19 44 44 H 1.09001 * 113.61885 * 139.97495 * 26 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3711 -0.0005 5 6 1.9254 3.6061 -0.0011 6 8 1.1853 4.7436 -0.0011 7 6 -0.2357 4.5931 -0.0011 8 6 3.3146 3.6834 -0.0005 9 6 3.9917 5.0297 -0.0005 10 8 3.8937 5.6122 1.3006 11 14 5.7866 4.8221 -0.4545 12 6 4.0725 2.5350 -0.0056 13 6 3.4462 1.2849 0.0000 14 6 4.2539 0.0531 0.0012 15 8 3.7066 -1.0329 0.0019 16 7 5.5995 0.1296 0.0012 17 6 6.4028 -1.0955 0.0017 18 1 5.8664 -1.9536 -0.4032 19 6 7.8085 -0.9107 -0.5937 20 6 8.3198 -1.8261 0.5312 21 8 8.3061 -3.2139 0.1907 22 6 9.6531 -1.3745 1.1306 23 9 9.5116 -0.0910 1.6687 24 9 10.0358 -2.2643 2.1401 25 9 10.6313 -1.3558 0.1306 26 6 7.0949 -1.3777 1.3458 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3634 -1.0277 0.0005 30 1 0.2150 2.3165 -0.0005 31 1 -0.5429 4.0439 -0.8911 32 1 -0.5429 4.0439 0.8889 33 1 -0.7052 5.5768 -0.0015 34 1 3.5060 5.6806 -0.7276 35 1 4.3087 6.4825 1.3742 36 1 6.4581 6.1462 -0.4891 37 1 6.4602 3.9367 0.5292 38 1 5.1506 2.5992 -0.0100 39 1 6.0360 0.9958 0.0009 40 1 7.9205 -1.3388 -1.5898 41 1 8.1793 0.1122 -0.5285 42 1 8.6262 -3.7947 0.8944 43 1 7.2711 -0.4828 1.9425 44 1 6.6307 -2.1828 1.9153 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_12297780.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 18:03:52 Heat of formation + Delta-G solvation = -268.509377 kcal Electronic energy + Delta-G solvation = -36168.151208 eV Core-core repulsion = 30639.906834 eV Total energy + Delta-G solvation = -5528.244374 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.121 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -51.25855 -48.80560 -48.72798 -42.12623 -41.27043 -40.21797 -39.58211 -38.39067 -37.15244 -36.58013 -34.19540 -32.37201 -31.68021 -28.98960 -28.84952 -28.07906 -27.16624 -26.07951 -25.11147 -23.77908 -22.59205 -21.66229 -21.22928 -20.08701 -19.88070 -19.54695 -19.44775 -18.65809 -18.53568 -18.10135 -17.42931 -17.08699 -17.06845 -16.73517 -16.53376 -16.35241 -16.22845 -15.80454 -15.76406 -15.58468 -15.48010 -15.40424 -15.29139 -15.17808 -14.91252 -14.88802 -14.50511 -14.32726 -14.17836 -13.97883 -13.85071 -13.69667 -13.63631 -13.45221 -13.22888 -12.78604 -12.53624 -12.52134 -12.45829 -12.13218 -11.91836 -11.87955 -11.62643 -11.35764 -10.95870 -10.40270 -10.19908 -9.91780 -9.19397 -4.91066 -0.26372 0.07991 1.30929 1.43479 1.60351 1.69358 1.94511 2.07738 2.12018 2.18263 2.40580 2.55411 2.57858 2.66050 2.86375 3.33769 3.36564 3.47820 3.49815 3.55027 3.68946 3.72205 3.87096 4.08336 4.14150 4.17625 4.24341 4.28841 4.29374 4.31400 4.42069 4.44770 4.46559 4.64962 4.66710 4.68341 4.77013 4.80366 4.86044 4.96895 5.05328 5.29332 5.40319 6.03255 6.28229 6.28454 6.47140 6.65027 7.19514 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.010 3.990 2 O -0.303 6.303 3 C 0.219 3.781 4 C -0.311 4.311 5 C 0.214 3.786 6 O -0.312 6.312 7 C 0.012 3.988 8 C -0.163 4.163 9 C -0.075 4.075 10 O -0.556 6.556 11 Si 0.756 3.244 12 C 0.001 3.999 13 C -0.228 4.228 14 C 0.568 3.432 15 O -0.558 6.558 16 N -0.710 5.710 17 C 0.140 3.860 18 H 0.112 0.888 19 C -0.120 4.120 20 C 0.070 3.930 21 O -0.519 6.519 22 C 0.436 3.564 23 F -0.175 7.175 24 F -0.186 7.186 25 F -0.181 7.181 26 C -0.169 4.169 27 H 0.069 0.931 28 H 0.074 0.926 29 H 0.113 0.887 30 H 0.165 0.835 31 H 0.073 0.927 32 H 0.064 0.936 33 H 0.120 0.880 34 H 0.083 0.917 35 H 0.392 0.608 36 H -0.285 1.285 37 H -0.269 1.269 38 H 0.160 0.840 39 H 0.412 0.588 40 H 0.110 0.890 41 H 0.132 0.868 42 H 0.404 0.596 43 H 0.115 0.885 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.653 4.396 -2.730 5.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.214 6.214 3 C 0.170 3.830 4 C -0.330 4.330 5 C 0.166 3.834 6 O -0.223 6.223 7 C -0.082 4.082 8 C -0.164 4.164 9 C -0.182 4.182 10 O -0.366 6.366 11 Si 0.659 3.341 12 C -0.017 4.017 13 C -0.232 4.232 14 C 0.358 3.642 15 O -0.437 6.437 16 N -0.363 5.363 17 C 0.035 3.965 18 H 0.130 0.870 19 C -0.158 4.158 20 C 0.026 3.974 21 O -0.328 6.328 22 C 0.382 3.618 23 F -0.157 7.157 24 F -0.167 7.167 25 F -0.163 7.163 26 C -0.208 4.208 27 H 0.087 0.913 28 H 0.092 0.908 29 H 0.132 0.868 30 H 0.182 0.818 31 H 0.092 0.908 32 H 0.083 0.917 33 H 0.139 0.861 34 H 0.101 0.899 35 H 0.242 0.758 36 H -0.211 1.211 37 H -0.195 1.195 38 H 0.177 0.823 39 H 0.250 0.750 40 H 0.128 0.872 41 H 0.150 0.850 42 H 0.257 0.743 43 H 0.133 0.867 44 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.635 3.410 -2.908 5.199 hybrid contribution -0.103 1.032 1.705 1.995 sum -2.738 4.441 -1.203 5.354 Atomic orbital electron populations 1.23482 0.76480 1.05802 1.02676 1.86360 1.23241 1.25784 1.86005 1.18954 0.91024 0.84749 0.88306 1.21415 1.02061 0.90672 1.18851 1.18915 0.90851 0.85057 0.88551 1.86111 1.21087 1.28614 1.86497 1.23476 0.76213 1.05925 1.02617 1.18593 0.90413 0.94968 1.12381 1.24858 1.12475 0.93091 0.87814 1.86565 1.80842 1.38626 1.30524 0.94419 0.71398 0.80837 0.87484 1.20952 1.00145 0.89067 0.91547 1.19092 0.90870 0.93634 1.19613 1.18017 0.82417 0.88347 0.75430 1.90825 1.72249 1.30111 1.50550 1.45702 1.05192 1.09829 1.75532 1.22134 0.89995 0.88726 0.95664 0.87007 1.23610 0.93243 1.00055 0.98875 1.23184 0.87960 0.86032 1.00261 1.86623 1.87765 1.13044 1.45373 1.21315 0.88547 0.75554 0.76425 1.93182 1.95787 1.40021 1.86700 1.93184 1.92732 1.68417 1.62377 1.93217 1.65933 1.96196 1.60911 1.24287 0.93829 1.04172 0.98527 0.91259 0.90759 0.86833 0.81780 0.90837 0.91694 0.86134 0.89890 0.75805 1.21148 1.19503 0.82339 0.75019 0.87199 0.85016 0.74316 0.86681 0.88742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -2.50 8.56 -68.75 -0.59 -3.09 16 3 C 0.22 1.40 6.70 22.82 0.15 1.55 16 4 C -0.31 -0.65 8.01 22.43 0.18 -0.47 16 5 C 0.21 0.69 6.67 22.60 0.15 0.84 16 6 O -0.31 -0.61 9.80 -90.29 -0.88 -1.49 16 7 C 0.01 -0.06 9.80 113.37 1.11 1.05 16 8 C -0.16 -0.38 5.31 -19.80 -0.11 -0.49 16 9 C -0.07 0.04 2.36 71.24 0.17 0.21 16 10 O -0.56 -1.34 12.86 -148.98 -1.92 -3.25 16 11 Si 0.76 -3.53 30.18 68.60 2.07 -1.46 16 12 C 0.00 0.00 8.14 22.50 0.18 0.18 16 13 C -0.23 -1.28 5.89 -20.00 -0.12 -1.40 16 14 C 0.57 4.35 7.76 86.63 0.67 5.02 16 15 O -0.56 -8.79 14.75 16.87 0.25 -8.55 16 16 N -0.71 -0.14 5.30 -443.42 -2.35 -2.49 16 17 C 0.14 -0.02 4.18 45.52 0.19 0.17 16 18 H 0.11 0.51 7.46 -2.39 -0.02 0.49 16 19 C -0.12 0.50 7.01 31.12 0.22 0.71 16 20 C 0.07 -0.13 1.36 -10.27 -0.01 -0.15 16 21 O -0.52 0.53 13.42 -148.98 -2.00 -1.47 16 22 C 0.44 0.11 2.85 71.98 0.21 0.31 16 23 F -0.18 -0.09 15.76 44.97 0.71 0.62 16 24 F -0.19 -0.30 16.65 44.97 0.75 0.45 16 25 F -0.18 -0.50 17.18 44.97 0.77 0.27 16 26 C -0.17 0.29 7.15 31.12 0.22 0.51 16 27 H 0.07 -0.29 7.66 -2.38 -0.02 -0.31 16 28 H 0.07 -0.37 7.66 -2.39 -0.02 -0.39 16 29 H 0.11 -0.38 8.14 -2.39 -0.02 -0.40 16 30 H 0.16 -0.53 4.50 -2.91 -0.01 -0.54 16 31 H 0.07 -0.60 7.65 -2.39 -0.02 -0.62 16 32 H 0.06 -0.42 7.65 -2.39 -0.02 -0.44 16 33 H 0.12 -1.04 8.14 -2.39 -0.02 -1.06 16 34 H 0.08 -0.19 7.82 -2.39 -0.02 -0.20 16 35 H 0.39 -2.13 8.74 -74.06 -0.65 -2.78 16 36 H -0.28 -0.01 7.11 99.48 0.71 0.69 16 37 H -0.27 0.48 6.75 99.48 0.67 1.15 16 38 H 0.16 -0.72 3.20 -2.91 -0.01 -0.73 16 39 H 0.41 -2.30 6.74 -92.71 -0.63 -2.92 16 40 H 0.11 -0.48 8.14 -2.39 -0.02 -0.50 16 41 H 0.13 -1.11 7.86 -2.39 -0.02 -1.12 16 42 H 0.40 -2.81 8.42 -74.06 -0.62 -3.43 16 43 H 0.11 -0.35 7.13 -2.39 -0.02 -0.37 16 44 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 Total: 0.00 -25.25 376.34 0.38 -24.87 By element: Atomic # 1 Polarization: -12.80 SS G_CDS: -0.76 Total: -13.56 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 4.33 Total: 9.15 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -2.35 Total: -2.49 kcal Atomic # 8 Polarization: -12.71 SS G_CDS: -5.14 Total: -17.85 kcal Atomic # 9 Polarization: -0.89 SS G_CDS: 2.23 Total: 1.34 kcal Atomic # 14 Polarization: -3.53 SS G_CDS: 2.07 Total: -1.46 kcal Total: -25.25 0.38 -24.87 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_12297780.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -243.635 kcal (2) G-P(sol) polarization free energy of solvation -25.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -268.885 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.874 kcal (6) G-S(sol) free energy of system = (1) + (5) -268.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds