Wall clock time and date at job start Thu Mar 4 2021 12:27:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.34802 * 125.90238 * 2 1 4 4 C 1.40997 * 107.48713 * 180.02562 * 3 2 1 5 5 C 1.50705 * 126.25541 * 180.02562 * 4 3 2 6 6 O 1.42898 * 109.46977 * 254.97502 * 5 4 3 7 7 Si 1.86296 * 109.47222 * 14.97511 * 5 4 3 8 8 C 1.34810 * 107.48374 * 359.73512 * 4 3 2 9 9 C 1.50697 * 125.90341 * 180.25292 * 8 4 3 10 10 N 1.36654 * 125.90155 * 180.02562 * 2 1 3 11 11 C 1.39658 * 125.68425 * 359.96544 * 10 2 1 12 12 C 1.40204 * 120.15546 * 270.02400 * 11 10 2 13 13 C 1.47578 * 120.18850 * 359.95511 * 12 11 10 14 14 O 1.21582 * 120.00301 * 359.97438 * 13 12 11 15 15 N 1.34777 * 119.99633 * 180.02562 * 13 12 11 16 16 C 1.46502 * 119.99843 * 179.97438 * 15 13 12 17 17 H 1.09000 * 112.90816 * 23.74366 * 16 15 13 18 18 C 1.53784 * 113.61491 * 154.99806 * 16 15 13 19 19 C 1.53787 * 87.07923 * 139.97939 * 18 16 15 20 20 O 1.42902 * 113.61146 * 89.12003 * 19 18 16 21 21 C 1.53003 * 113.61385 * 220.01697 * 19 18 16 22 22 F 1.39900 * 109.47004 * 60.00341 * 21 19 18 23 23 F 1.39901 * 109.46872 * 180.02562 * 21 19 18 24 24 F 1.39895 * 109.47172 * 300.00326 * 21 19 18 25 25 C 1.53778 * 87.08035 * 334.56830 * 19 18 16 26 26 C 1.39652 * 119.61603 * 180.22568 * 12 11 10 27 27 C 1.37826 * 119.92084 * 359.49772 * 26 12 11 28 28 C 1.38533 * 120.30579 * 0.50401 * 27 26 12 29 29 C 1.38067 * 120.39412 * 359.74525 * 28 27 26 30 30 H 1.09005 * 109.47025 * 269.95625 * 1 2 3 31 31 H 1.08993 * 109.47399 * 29.95366 * 1 2 3 32 32 H 1.09003 * 109.46947 * 149.95751 * 1 2 3 33 33 H 1.08007 * 126.25983 * 0.06097 * 3 2 1 34 34 H 1.09003 * 109.46669 * 134.98106 * 5 4 3 35 35 H 0.96704 * 114.00287 * 59.99754 * 6 5 4 36 36 H 1.48504 * 109.99895 * 58.68430 * 7 5 4 37 37 H 1.48501 * 109.99603 * 179.97438 * 7 5 4 38 38 H 1.09001 * 109.47497 * 270.20167 * 9 8 4 39 39 H 1.09000 * 109.46813 * 30.20056 * 9 8 4 40 40 H 1.08995 * 109.47008 * 150.19860 * 9 8 4 41 41 H 0.97002 * 120.00010 * 359.97438 * 15 13 12 42 42 H 1.09004 * 113.61451 * 25.43425 * 18 16 15 43 43 H 1.08994 * 113.61477 * 254.52726 * 18 16 15 44 44 H 0.96699 * 113.99936 * 179.97438 * 20 19 18 45 45 H 1.08999 * 113.61111 * 139.98327 * 25 19 18 46 46 H 1.08999 * 113.61280 * 270.79710 * 25 19 18 47 47 H 1.08006 * 120.04399 * 179.72285 * 26 12 11 48 48 H 1.07998 * 119.84902 * 180.25469 * 27 26 12 49 49 H 1.08005 * 119.80338 * 179.71957 * 28 27 26 50 50 H 1.08000 * 119.96735 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2975 1.0919 0.0000 4 6 3.6353 0.6465 -0.0006 5 6 4.8648 1.5180 -0.0003 6 8 5.4550 1.5094 -1.3016 7 14 4.3903 3.2611 0.4549 8 6 3.6133 -0.7014 0.0050 9 6 4.8195 -1.6048 0.0119 10 7 2.3083 -1.1069 -0.0005 11 6 1.8672 -2.4320 -0.0004 12 6 1.6448 -3.1002 1.2119 13 6 1.8765 -2.4077 2.4944 14 8 2.2618 -1.2545 2.5016 15 7 1.6620 -3.0539 3.6575 16 6 1.8926 -2.3666 4.9306 17 1 1.8283 -1.2819 4.8449 18 6 1.0739 -2.9419 6.0984 19 6 2.3258 -2.7455 6.9696 20 8 2.3967 -1.4592 7.5882 21 6 2.5759 -3.8927 7.9507 22 9 2.7451 -5.0857 7.2399 23 9 3.7295 -3.6257 8.6959 24 9 1.4817 -4.0151 8.8137 25 6 3.1478 -2.8524 5.6744 26 6 1.2082 -4.4267 1.1989 27 6 0.9890 -5.0665 -0.0020 28 6 1.2097 -4.4032 -1.1980 29 6 1.6463 -3.0933 -1.2001 30 1 -0.3633 -0.0008 1.0277 31 1 -0.3634 0.8903 -0.5131 32 1 -0.3633 -0.8896 -0.5145 33 1 1.9666 2.1201 0.0009 34 1 5.5814 1.1349 0.7262 35 1 4.8725 1.8381 -2.0000 36 1 3.7464 3.2793 1.7929 37 1 5.5943 4.1304 0.4593 38 1 5.1152 -1.8241 -1.0141 39 1 5.6414 -1.1096 0.5289 40 1 4.5743 -2.5342 0.5259 41 1 1.3550 -3.9740 3.6517 42 1 0.7956 -3.9872 5.9633 43 1 0.2335 -2.3138 6.3937 44 1 3.1817 -1.3298 8.1378 45 1 3.9816 -2.1519 5.6274 46 1 3.4377 -3.8729 5.4242 47 1 1.0390 -4.9494 2.1287 48 1 0.6474 -6.0910 -0.0107 49 1 1.0397 -4.9138 -2.1344 50 1 1.8165 -2.5829 -2.1365 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_12335856.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:26 Heat of formation + Delta-G solvation = -142.156015 kcal Electronic energy + Delta-G solvation = -41295.082539 eV Core-core repulsion = 35648.502071 eV Total energy + Delta-G solvation = -5646.580467 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.149 amu Computer time = 1.69 seconds Orbital eigenvalues (eV) -51.31982 -48.86266 -48.79206 -42.85720 -41.55925 -40.42834 -39.20988 -37.65997 -36.70457 -34.57892 -34.04599 -33.57196 -32.20919 -30.41621 -30.11125 -28.86249 -27.27268 -27.21269 -25.52709 -24.59958 -24.00008 -23.33144 -21.87315 -21.54978 -20.90978 -20.31105 -20.00209 -19.61220 -19.51802 -18.87123 -17.86631 -17.55205 -17.44757 -17.03027 -16.77764 -16.42297 -16.12453 -16.04521 -15.92603 -15.77097 -15.64052 -15.49860 -15.23730 -15.19954 -14.97931 -14.97327 -14.93019 -14.75066 -14.69456 -14.44691 -14.35045 -14.16796 -14.00941 -13.97711 -13.79641 -13.59455 -13.39492 -13.31730 -13.21475 -13.05818 -12.90002 -12.75501 -12.60605 -12.35814 -12.15856 -12.01399 -11.74782 -11.45400 -11.05632 -10.36985 -10.33473 -10.13925 -10.02736 -9.50792 -8.65868 -4.97360 -0.42651 0.05464 1.21823 1.35523 1.43381 1.69859 1.70491 1.89421 1.95743 1.98595 2.04631 2.32571 2.49455 2.56742 2.60815 2.77214 3.27979 3.38534 3.41223 3.51631 3.63683 3.70439 3.78331 3.96913 4.00946 4.06646 4.16767 4.20243 4.24847 4.31539 4.31855 4.34811 4.43067 4.49938 4.55018 4.55700 4.66427 4.68742 4.69678 4.71128 4.77634 4.79988 4.93560 5.01979 5.05811 5.19357 5.23331 5.27968 5.29783 5.47001 5.64278 6.14086 6.18920 6.28581 6.34773 6.64994 6.88631 7.06575 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.031 3.969 3 C -0.202 4.202 4 C -0.209 4.209 5 C -0.034 4.034 6 O -0.559 6.559 7 Si 0.788 3.212 8 C 0.051 3.949 9 C -0.072 4.072 10 N -0.392 5.392 11 C 0.145 3.855 12 C -0.147 4.147 13 C 0.548 3.452 14 O -0.544 6.544 15 N -0.702 5.702 16 C 0.143 3.857 17 H 0.102 0.898 18 C -0.117 4.117 19 C 0.069 3.931 20 O -0.522 6.522 21 C 0.438 3.562 22 F -0.173 7.173 23 F -0.186 7.186 24 F -0.182 7.182 25 C -0.165 4.165 26 C -0.074 4.074 27 C -0.107 4.107 28 C -0.076 4.076 29 C -0.122 4.122 30 H 0.059 0.941 31 H 0.097 0.903 32 H 0.064 0.936 33 H 0.154 0.846 34 H 0.086 0.914 35 H 0.391 0.609 36 H -0.305 1.305 37 H -0.297 1.297 38 H 0.077 0.923 39 H 0.070 0.930 40 H 0.053 0.947 41 H 0.416 0.584 42 H 0.134 0.866 43 H 0.103 0.897 44 H 0.404 0.596 45 H 0.088 0.912 46 H 0.120 0.880 47 H 0.163 0.837 48 H 0.169 0.831 49 H 0.163 0.837 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.439 -7.152 -3.553 9.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.078 4.078 3 C -0.226 4.226 4 C -0.215 4.215 5 C -0.145 4.145 6 O -0.366 6.366 7 Si 0.696 3.304 8 C -0.059 4.059 9 C -0.130 4.130 10 N -0.067 5.067 11 C 0.055 3.945 12 C -0.151 4.151 13 C 0.335 3.665 14 O -0.421 6.421 15 N -0.356 5.356 16 C 0.037 3.963 17 H 0.120 0.880 18 C -0.155 4.155 19 C 0.025 3.975 20 O -0.331 6.331 21 C 0.383 3.617 22 F -0.154 7.154 23 F -0.167 7.167 24 F -0.163 7.163 25 C -0.204 4.204 26 C -0.093 4.093 27 C -0.125 4.125 28 C -0.094 4.094 29 C -0.141 4.141 30 H 0.077 0.923 31 H 0.116 0.884 32 H 0.083 0.917 33 H 0.171 0.829 34 H 0.104 0.896 35 H 0.241 0.759 36 H -0.233 1.233 37 H -0.225 1.225 38 H 0.096 0.904 39 H 0.089 0.911 40 H 0.072 0.928 41 H 0.255 0.745 42 H 0.152 0.848 43 H 0.122 0.878 44 H 0.257 0.743 45 H 0.106 0.894 46 H 0.138 0.862 47 H 0.180 0.820 48 H 0.187 0.813 49 H 0.181 0.819 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.222 -6.156 -2.932 8.589 hybrid contribution 0.950 -0.982 1.251 1.853 sum -4.272 -7.138 -1.681 8.487 Atomic orbital electron populations 1.20287 0.87138 1.03906 1.02120 1.20523 0.93934 0.84994 1.08302 1.20646 0.91783 0.98051 1.12101 1.19591 0.94995 0.92872 1.14081 1.24356 0.93321 1.08795 0.88045 1.86402 1.44180 1.89033 1.17004 0.93688 0.80013 0.74392 0.82289 1.20194 0.84224 0.94097 1.07393 1.20167 0.93287 0.96970 1.02529 1.41023 1.05206 1.02989 1.57440 1.17828 0.99731 0.83581 0.93406 1.20203 1.06624 0.96445 0.91827 1.18477 0.77385 0.86071 0.84531 1.90923 1.45502 1.17978 1.87706 1.45658 1.68624 1.17139 1.04148 1.22034 0.94826 0.98153 0.81280 0.87955 1.23580 0.95628 1.05196 0.91097 1.23197 1.03019 0.82045 0.89282 1.86626 1.50439 1.28287 1.67751 1.21247 0.73970 0.84917 0.81538 1.93184 1.95225 1.49119 1.77889 1.93187 1.51066 1.93704 1.78763 1.93217 1.54491 1.96381 1.72215 1.24246 0.98861 1.05119 0.92159 1.21630 0.95403 0.91260 1.00988 1.21689 0.97750 1.01961 0.91077 1.21700 0.94429 0.92656 1.00658 1.21469 0.99929 0.96188 0.96501 0.92251 0.88414 0.91731 0.82879 0.89601 0.75923 1.23256 1.22462 0.90447 0.91114 0.92806 0.74506 0.84767 0.87831 0.74322 0.89354 0.86176 0.81962 0.81305 0.81916 0.84651 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.20 10.09 71.24 0.72 0.52 16 2 C 0.03 0.25 6.00 41.02 0.25 0.49 16 3 C -0.20 -1.67 9.27 22.16 0.21 -1.46 16 4 C -0.21 -2.03 5.35 -19.97 -0.11 -2.14 16 5 C -0.03 -0.28 2.60 71.24 0.19 -0.09 16 6 O -0.56 -3.68 12.88 -148.98 -1.92 -5.60 16 7 Si 0.79 4.52 30.81 68.60 2.11 6.63 16 8 C 0.05 0.51 5.98 41.02 0.25 0.75 16 9 C -0.07 -0.52 9.87 71.24 0.70 0.19 16 10 N -0.39 -3.03 1.45 -319.54 -0.46 -3.49 16 11 C 0.14 0.46 4.52 38.50 0.17 0.64 16 12 C -0.15 -0.08 5.89 -19.99 -0.12 -0.20 16 13 C 0.55 2.26 7.77 86.71 0.67 2.93 16 14 O -0.54 -7.07 13.28 -3.97 -0.05 -7.13 16 15 N -0.70 2.20 5.31 -443.16 -2.35 -0.15 16 16 C 0.14 -0.21 4.17 45.52 0.19 -0.02 16 17 H 0.10 0.51 7.47 -2.39 -0.02 0.49 16 18 C -0.12 0.60 7.01 31.12 0.22 0.81 16 19 C 0.07 -0.18 1.36 -10.27 -0.01 -0.19 16 20 O -0.52 0.36 13.41 -148.98 -2.00 -1.64 16 21 C 0.44 -0.34 2.85 71.98 0.21 -0.13 16 22 F -0.17 0.25 15.75 44.97 0.71 0.96 16 23 F -0.19 -0.18 16.65 44.97 0.75 0.57 16 24 F -0.18 -0.39 17.18 44.97 0.77 0.39 16 25 C -0.16 0.49 7.14 31.12 0.22 0.71 16 26 C -0.07 0.54 9.53 22.51 0.21 0.76 16 27 C -0.11 1.03 10.02 22.24 0.22 1.25 16 28 C -0.08 0.56 10.03 22.30 0.22 0.79 16 29 C -0.12 0.19 9.96 22.35 0.22 0.42 16 30 H 0.06 0.25 8.14 -2.38 -0.02 0.23 16 31 H 0.10 -0.11 8.14 -2.39 -0.02 -0.13 16 32 H 0.06 0.07 7.83 -2.39 -0.02 0.05 16 33 H 0.15 0.58 6.59 -2.91 -0.02 0.56 16 34 H 0.09 0.90 7.49 -2.39 -0.02 0.88 16 35 H 0.39 -0.50 8.70 -74.05 -0.64 -1.14 16 36 H -0.30 -4.01 7.11 99.48 0.71 -3.30 16 37 H -0.30 -3.30 7.11 99.48 0.71 -2.59 16 38 H 0.08 0.41 8.14 -2.39 -0.02 0.39 16 39 H 0.07 0.57 7.49 -2.39 -0.02 0.55 16 40 H 0.05 0.36 7.83 -2.39 -0.02 0.34 16 41 H 0.42 -4.22 6.76 -92.71 -0.63 -4.84 16 42 H 0.13 -1.34 7.86 -2.39 -0.02 -1.35 16 43 H 0.10 -0.43 8.14 -2.39 -0.02 -0.45 16 44 H 0.40 -2.61 8.42 -74.06 -0.62 -3.23 16 45 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 46 H 0.12 -0.64 7.13 -2.39 -0.02 -0.66 16 47 H 0.16 -2.29 6.40 -2.91 -0.02 -2.30 16 48 H 0.17 -2.62 8.06 -2.91 -0.02 -2.65 16 49 H 0.16 -2.03 8.06 -2.91 -0.02 -2.05 16 50 H 0.14 -0.25 8.06 -2.91 -0.02 -0.27 16 Total: 0.00 -26.40 425.23 1.38 -25.02 By element: Atomic # 1 Polarization: -20.76 SS G_CDS: -0.81 Total: -21.57 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: 4.63 Total: 6.02 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -2.82 Total: -3.64 kcal Atomic # 8 Polarization: -10.40 SS G_CDS: -3.97 Total: -14.37 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 2.23 Total: 1.91 kcal Atomic # 14 Polarization: 4.52 SS G_CDS: 2.11 Total: 6.63 kcal Total: -26.40 1.38 -25.02 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_12335856.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.138 kcal (2) G-P(sol) polarization free energy of solvation -26.396 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.534 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.018 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds