Wall clock time and date at job start Thu Mar 4 2021 12:27:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86305 * 109.46757 * 2 1 4 4 C 1.50700 * 109.47168 * 240.00398 * 2 1 3 5 5 C 1.35007 * 126.43173 * 149.93898 * 4 2 1 6 6 N 1.33584 * 108.65489 * 180.02562 * 5 4 2 7 7 C 1.32414 * 109.22374 * 0.02562 * 6 5 4 8 8 C 1.41249 * 132.11309 * 180.02562 * 7 6 5 9 9 Br 1.89100 * 120.25583 * 359.93401 * 8 7 6 10 10 C 1.35699 * 119.49028 * 179.97438 * 8 7 6 11 11 C 1.41758 * 119.53372 * 359.97438 * 10 8 7 12 12 C 1.47574 * 120.01251 * 180.02562 * 11 10 8 13 13 O 1.21595 * 119.99841 * 180.02562 * 12 11 10 14 14 N 1.34772 * 119.99922 * 0.02562 * 12 11 10 15 15 C 1.46502 * 120.00036 * 180.02562 * 14 12 11 16 16 H 1.08994 * 112.84803 * 23.79880 * 15 14 12 17 17 C 1.53785 * 113.61625 * 154.99796 * 15 14 12 18 18 C 1.53784 * 87.08046 * 139.97778 * 17 15 14 19 19 O 1.42902 * 113.60968 * 89.11621 * 18 17 15 20 20 C 1.52998 * 113.61250 * 220.01714 * 18 17 15 21 21 F 1.39901 * 109.47045 * 60.00498 * 20 18 17 22 22 F 1.39905 * 109.46767 * 180.02562 * 20 18 17 23 23 F 1.39898 * 109.47223 * 300.00045 * 20 18 17 24 24 C 1.53781 * 87.08188 * 334.56918 * 18 17 15 25 25 C 1.36498 * 119.98028 * 0.02562 * 11 10 8 26 26 N 1.35947 * 120.50219 * 359.97438 * 25 11 10 27 27 H 0.96697 * 113.99516 * 299.99564 * 1 2 3 28 28 H 1.08993 * 109.47314 * 120.00158 * 2 1 3 29 29 H 1.48496 * 110.00131 * 300.00338 * 3 2 1 30 30 H 1.48497 * 109.99934 * 61.32429 * 3 2 1 31 31 H 1.07997 * 125.66600 * 0.05072 * 5 4 2 32 32 H 1.07999 * 120.23409 * 179.97438 * 10 8 7 33 33 H 0.96999 * 119.99814 * 359.97438 * 14 12 11 34 34 H 1.08999 * 113.61214 * 254.52854 * 17 15 14 35 35 H 1.09001 * 113.60970 * 25.43151 * 17 15 14 36 36 H 0.96701 * 113.99442 * 179.97438 * 19 18 17 37 37 H 1.08995 * 113.61016 * 270.88280 * 24 18 17 38 38 H 1.08997 * 113.61204 * 139.97887 * 24 18 17 39 39 H 1.07999 * 119.74924 * 179.97438 * 25 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 3.0850 -0.4603 -1.8858 6 7 3.1760 -1.2953 -2.9245 7 6 2.1065 -2.0756 -2.9516 8 6 1.7124 -3.1124 -3.8262 9 35 2.8120 -3.5968 -5.2864 10 6 0.5382 -3.7577 -3.6109 11 6 -0.2743 -3.3819 -2.5118 12 6 -1.5531 -4.0770 -2.2675 13 8 -2.2501 -3.7541 -1.3249 14 7 -1.9482 -5.0695 -3.0892 15 6 -3.2179 -5.7591 -2.8470 16 1 -3.9247 -5.1566 -2.2765 17 6 -3.8263 -6.3913 -4.1100 18 6 -4.2144 -7.5897 -3.2278 19 8 -5.4987 -7.4573 -2.6154 20 6 -4.0176 -8.9437 -3.9124 21 9 -2.6713 -9.0996 -4.2594 22 9 -4.3957 -9.9679 -3.0374 23 9 -4.8065 -9.0019 -5.0663 24 6 -3.0490 -7.1893 -2.3078 25 6 0.1263 -2.3770 -1.6794 26 7 1.3026 -1.7304 -1.8948 27 1 -0.3932 0.4416 0.7651 28 1 1.7924 -0.5138 0.8899 29 1 1.5614 2.4680 -1.2084 30 1 1.5879 2.4585 1.2243 31 1 3.8133 0.2897 -1.6148 32 1 0.2250 -4.5519 -4.2723 33 1 -1.3923 -5.3267 -3.8413 34 1 -4.6824 -5.8433 -4.5035 35 1 -3.0891 -6.6333 -4.8755 36 1 -5.7486 -8.2082 -2.0596 37 1 -2.0994 -7.6495 -2.5807 38 1 -3.2777 -7.2856 -1.2464 39 1 -0.4959 -2.0935 -0.8434 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:41 Heat of formation + Delta-G solvation = -129.518780 kcal Electronic energy + Delta-G solvation = -34027.297988 eV Core-core repulsion = 28570.860596 eV Total energy + Delta-G solvation = -5456.437392 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.008 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.25536 -48.79818 -48.73259 -44.24283 -41.68175 -40.33754 -38.47329 -38.02611 -36.71638 -35.41272 -34.33156 -32.48357 -31.87609 -30.27103 -28.87044 -27.19326 -26.89667 -25.96021 -24.07325 -23.83320 -22.48820 -21.92324 -21.40951 -20.05061 -19.56137 -19.47107 -19.21414 -18.77754 -18.57310 -17.90316 -17.44698 -17.37377 -16.98899 -16.47534 -16.22790 -16.09376 -15.94696 -15.59554 -15.57311 -15.47091 -15.38120 -15.17428 -14.92750 -14.91188 -14.87916 -14.60287 -14.47409 -14.12060 -13.97281 -13.71976 -13.42132 -13.38227 -13.28962 -13.01935 -12.86385 -12.52414 -12.16104 -11.95943 -11.60990 -11.52177 -11.37735 -11.35470 -11.25766 -10.90598 -10.36859 -10.00679 -9.04790 -4.94299 -0.90286 -0.38151 0.19486 0.94676 1.15461 1.35958 1.46080 1.64496 1.77736 1.92911 2.00067 2.19201 2.40379 2.56153 2.63973 2.77810 2.83571 2.95924 3.16280 3.33837 3.37303 3.41683 3.43803 3.48290 3.53451 3.92746 4.07176 4.15616 4.30068 4.31117 4.40030 4.41731 4.45599 4.49803 4.65160 4.77938 4.81442 4.98249 5.24498 5.31311 5.57009 6.22822 6.27019 6.41963 6.48160 6.89534 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.054 4.054 3 Si 0.808 3.192 4 C -0.051 4.051 5 C 0.041 3.959 6 N -0.491 5.491 7 C 0.221 3.779 8 C -0.081 4.081 9 Br 0.007 6.993 10 C -0.025 4.025 11 C -0.175 4.175 12 C 0.584 3.416 13 O -0.562 6.562 14 N -0.696 5.696 15 C 0.139 3.861 16 H 0.115 0.885 17 C -0.122 4.122 18 C 0.068 3.932 19 O -0.521 6.521 20 C 0.436 3.564 21 F -0.173 7.173 22 F -0.186 7.186 23 F -0.184 7.184 24 C -0.165 4.165 25 C 0.166 3.834 26 N -0.360 5.360 27 H 0.406 0.594 28 H 0.110 0.890 29 H -0.308 1.308 30 H -0.272 1.272 31 H 0.230 0.770 32 H 0.188 0.812 33 H 0.419 0.581 34 H 0.105 0.895 35 H 0.133 0.867 36 H 0.405 0.595 37 H 0.121 0.879 38 H 0.098 0.902 39 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.488 -0.277 2.609 3.016 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.162 4.162 3 Si 0.709 3.291 4 C -0.162 4.162 5 C -0.108 4.108 6 N -0.210 5.210 7 C -0.024 4.024 8 C -0.163 4.163 9 Br 0.093 6.907 10 C -0.051 4.051 11 C -0.182 4.182 12 C 0.371 3.629 13 O -0.441 6.441 14 N -0.347 5.347 15 C 0.034 3.966 16 H 0.133 0.867 17 C -0.160 4.160 18 C 0.024 3.976 19 O -0.330 6.330 20 C 0.381 3.619 21 F -0.155 7.155 22 F -0.167 7.167 23 F -0.165 7.165 24 C -0.204 4.204 25 C 0.040 3.960 26 N -0.033 5.033 27 H 0.259 0.741 28 H 0.127 0.873 29 H -0.235 1.235 30 H -0.198 1.198 31 H 0.246 0.754 32 H 0.205 0.795 33 H 0.258 0.742 34 H 0.124 0.876 35 H 0.152 0.848 36 H 0.258 0.742 37 H 0.139 0.861 38 H 0.116 0.884 39 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 1.966 0.843 1.361 2.535 hybrid contribution -1.941 -1.050 1.180 2.502 sum 0.025 -0.207 2.541 2.550 Atomic orbital electron populations 1.86437 1.18115 1.81084 1.52013 1.24774 0.84366 1.12140 0.94911 0.93596 0.89477 0.69224 0.76787 1.21455 0.97473 0.95755 1.01513 1.22978 0.96652 1.00211 0.90990 1.70840 1.20034 1.08089 1.22015 1.20735 0.90132 1.00128 0.91378 1.20577 0.98589 0.99233 0.97948 1.96836 1.66734 1.90491 1.36666 1.21364 0.90122 0.98128 0.95459 1.19226 0.98413 1.01227 0.99355 1.17529 0.83918 0.79422 0.82030 1.90847 1.55805 1.66237 1.31245 1.45599 1.22760 1.35196 1.31183 1.22222 0.85503 0.91636 0.97222 0.86691 1.23623 1.02890 0.92578 0.96861 1.23196 0.87776 0.89489 0.97170 1.86624 1.31213 1.48278 1.66890 1.21322 0.74136 0.88737 0.77689 1.93189 1.33580 1.96227 1.92483 1.93188 1.91162 1.63259 1.69124 1.93217 1.74589 1.96906 1.51778 1.24280 0.98251 0.96413 1.01448 1.22186 0.84984 0.89822 0.99028 1.42726 1.15034 1.24339 1.21207 0.74119 0.87258 1.23548 1.19760 0.75395 0.79460 0.74201 0.87605 0.84850 0.74239 0.86059 0.88376 0.79525 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.73 10.88 -148.98 -1.62 -0.89 16 2 C -0.05 0.19 3.05 71.24 0.22 0.41 16 3 Si 0.81 -4.52 31.18 68.60 2.14 -2.38 16 4 C -0.05 -0.12 6.28 41.01 0.26 0.13 16 5 C 0.04 0.08 10.44 83.68 0.87 0.96 16 6 N -0.49 -4.02 11.30 -194.11 -2.19 -6.22 16 7 C 0.22 1.58 7.59 134.19 1.02 2.60 16 8 C -0.08 -0.25 6.24 22.42 0.14 -0.11 16 9 Br 0.01 0.02 33.72 -20.37 -0.69 -0.67 16 10 C -0.03 0.06 9.26 22.55 0.21 0.27 16 11 C -0.17 -0.08 5.84 -20.35 -0.12 -0.20 16 12 C 0.58 0.49 7.76 86.71 0.67 1.16 16 13 O -0.56 -4.71 15.87 -4.01 -0.06 -4.78 16 14 N -0.70 4.10 5.31 -443.15 -2.35 1.75 16 15 C 0.14 -0.68 4.17 45.52 0.19 -0.49 16 16 H 0.12 -0.04 7.46 -2.39 -0.02 -0.06 16 17 C -0.12 0.89 7.01 31.12 0.22 1.10 16 18 C 0.07 -0.34 1.36 -10.27 -0.01 -0.35 16 19 O -0.52 1.83 13.41 -148.98 -2.00 -0.17 16 20 C 0.44 -0.96 2.85 71.98 0.21 -0.76 16 21 F -0.17 0.44 15.75 44.97 0.71 1.14 16 22 F -0.19 0.11 16.65 44.97 0.75 0.86 16 23 F -0.18 -0.22 17.18 44.97 0.77 0.55 16 24 C -0.17 1.04 7.14 31.12 0.22 1.27 16 25 C 0.17 0.62 9.91 83.65 0.83 1.45 16 26 N -0.36 -1.95 2.93 -337.71 -0.99 -2.94 16 27 H 0.41 -3.86 8.74 -74.06 -0.65 -4.50 16 28 H 0.11 -0.90 7.96 -2.39 -0.02 -0.91 16 29 H -0.31 -1.28 7.11 99.48 0.71 -0.57 16 30 H -0.27 0.68 7.11 99.48 0.71 1.39 16 31 H 0.23 -1.61 6.90 -2.91 -0.02 -1.63 16 32 H 0.19 -1.98 6.44 -2.91 -0.02 -2.00 16 33 H 0.42 -5.04 6.76 -92.71 -0.63 -5.67 16 34 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 35 H 0.13 -1.54 7.86 -2.39 -0.02 -1.55 16 36 H 0.40 -3.76 8.42 -74.06 -0.62 -4.38 16 37 H 0.12 -1.01 7.13 -2.39 -0.02 -1.03 16 38 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 39 H 0.19 0.77 6.19 -2.91 -0.02 0.75 16 Total: 0.00 -26.48 367.47 -1.27 -27.75 By element: Atomic # 1 Polarization: -20.79 SS G_CDS: -0.65 Total: -21.45 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: 4.92 Total: 7.44 kcal Atomic # 7 Polarization: -1.87 SS G_CDS: -5.54 Total: -7.40 kcal Atomic # 8 Polarization: -2.16 SS G_CDS: -3.68 Total: -5.84 kcal Atomic # 9 Polarization: 0.32 SS G_CDS: 2.23 Total: 2.55 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: 2.14 Total: -2.38 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -26.48 -1.27 -27.75 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.773 kcal (2) G-P(sol) polarization free energy of solvation -26.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.270 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.746 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.519 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds