Wall clock time and date at job start Thu Mar 4 2021 12:27:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.47131 * 2 1 4 4 C 1.50698 * 109.47021 * 120.00253 * 2 1 3 5 5 C 1.38400 * 119.82950 * 64.99683 * 4 2 1 6 6 C 1.37889 * 120.16971 * 179.97438 * 5 4 2 7 7 C 1.39836 * 119.82865 * 0.02562 * 6 5 4 8 8 C 1.47211 * 120.17203 * 179.97438 * 7 6 5 9 9 C 1.34804 * 119.99794 * 180.02562 * 8 7 6 10 10 C 1.46432 * 119.99782 * 180.02562 * 9 8 7 11 11 O 1.21703 * 119.99903 * 359.97438 * 10 9 8 12 12 N 1.34777 * 120.00077 * 180.02562 * 10 9 8 13 13 C 1.46498 * 119.99828 * 180.27581 * 12 10 9 14 14 H 1.09001 * 112.85160 * 25.05344 * 13 12 10 15 15 C 1.53784 * 113.61507 * 156.25317 * 13 12 10 16 16 C 1.53776 * 87.08293 * 139.97795 * 15 13 12 17 17 O 1.42899 * 113.61404 * 89.20040 * 16 15 13 18 18 C 1.52996 * 113.61729 * 220.01989 * 16 15 13 19 19 F 1.39898 * 109.47312 * 59.99563 * 18 16 15 20 20 F 1.39894 * 109.47512 * 180.02562 * 18 16 15 21 21 F 1.39907 * 109.46845 * 300.00177 * 18 16 15 22 22 C 1.53781 * 113.61116 * 253.85697 * 13 12 10 23 23 C 1.39839 * 119.65726 * 0.24919 * 7 6 5 24 24 C 1.37890 * 119.82799 * 359.51799 * 23 7 6 25 25 H 0.96706 * 114.00178 * 59.99752 * 1 2 3 26 26 H 1.09000 * 109.46708 * 239.99999 * 2 1 3 27 27 H 1.48506 * 109.99782 * 298.67948 * 3 2 1 28 28 H 1.48493 * 110.00166 * 60.00076 * 3 2 1 29 29 H 1.07998 * 119.91596 * 0.02562 * 5 4 2 30 30 H 1.08006 * 120.08533 * 179.97438 * 6 5 4 31 31 H 1.08001 * 119.99663 * 359.97438 * 8 7 6 32 32 H 1.08001 * 120.00538 * 359.97438 * 9 8 7 33 33 H 0.97001 * 119.99727 * 359.97438 * 12 10 9 34 34 H 1.09000 * 113.61297 * 254.52834 * 15 13 12 35 35 H 1.08999 * 113.61335 * 25.42565 * 15 13 12 36 36 H 0.96704 * 113.99855 * 180.02562 * 17 16 15 37 37 H 1.08995 * 113.61680 * 334.57196 * 22 13 12 38 38 H 1.09006 * 113.61326 * 105.47146 * 22 13 12 39 39 H 1.08004 * 120.08183 * 179.74921 * 23 7 6 40 40 H 1.07999 * 119.91491 * 180.23305 * 24 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6823 -2.0619 1.3949 6 6 2.1391 -2.7191 2.5178 7 6 2.8551 -2.0164 3.4919 8 6 3.3458 -2.7103 4.6939 9 6 4.0353 -2.0294 5.6310 10 6 4.5238 -2.7198 6.8263 11 8 4.3071 -3.9082 6.9740 12 7 5.2127 -2.0389 7.7636 13 6 5.7067 -2.7310 8.9565 14 1 5.8530 -3.7991 8.7961 15 6 6.9093 -2.0369 9.6177 16 6 6.2638 -2.3805 10.9704 17 8 6.6560 -3.6548 11.4846 18 6 6.3791 -1.2608 12.0066 19 9 5.7469 -0.1105 11.5226 20 9 5.7671 -1.6634 13.1984 21 9 7.7295 -0.9847 12.2465 22 6 4.9130 -2.4026 10.2321 23 6 3.0976 -0.6498 3.3211 24 6 2.6384 -0.0078 2.1905 25 1 -0.3934 0.4418 -0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 1.5879 2.4585 -1.2243 28 1 1.5616 2.4679 1.2084 29 1 1.1296 -2.6033 0.6415 30 1 1.9437 -3.7737 2.6449 31 1 3.1527 -3.7648 4.8252 32 1 4.2280 -0.9748 5.4999 33 1 5.3851 -1.0916 7.6461 34 1 7.8571 -2.5465 9.4441 35 1 6.9601 -0.9667 9.4174 36 1 6.2529 -3.8768 12.3352 37 1 4.4170 -1.4325 10.2002 38 1 4.2515 -3.2069 10.5540 39 1 3.6464 -0.0995 4.0712 40 1 2.8282 1.0468 2.0554 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_12360594.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:27:49 Heat of formation + Delta-G solvation = -189.922045 kcal Electronic energy + Delta-G solvation = -28745.370644 eV Core-core repulsion = 23885.209935 eV Total energy + Delta-G solvation = -4860.160709 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.107 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -51.26409 -48.80836 -48.73803 -41.48045 -40.60200 -39.92964 -37.87398 -36.64675 -35.15834 -34.11465 -32.20465 -31.33075 -28.91268 -27.19597 -27.15605 -24.80903 -23.98881 -23.19749 -21.93294 -21.48037 -20.36481 -19.96694 -19.54880 -19.44715 -18.66507 -18.55484 -17.51522 -17.28590 -16.90935 -16.52770 -16.39219 -16.05810 -15.87495 -15.59403 -15.45240 -15.40371 -15.20875 -15.18288 -14.91988 -14.90316 -14.79321 -14.45131 -14.34549 -14.08514 -13.89992 -13.84552 -13.69654 -13.55362 -13.26142 -13.00496 -12.49967 -12.29961 -12.04990 -11.94329 -11.71664 -11.38922 -11.31177 -11.06485 -10.49483 -10.20202 -9.96955 -9.23360 -4.92574 -0.54454 0.40748 0.88116 1.29796 1.43161 1.60504 1.94607 2.14344 2.19333 2.40885 2.56473 2.64718 2.78354 2.84859 3.35154 3.38200 3.46659 3.49229 3.59123 3.76434 3.85376 3.94996 4.06764 4.20637 4.23692 4.33210 4.40284 4.41043 4.43560 4.56722 4.64696 4.77733 4.84453 4.89003 4.98733 5.10915 5.16905 5.37087 5.43233 5.49546 5.60951 5.90579 6.26315 6.51030 6.56324 7.18782 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.092 4.092 3 Si 0.768 3.232 4 C -0.075 4.075 5 C -0.109 4.109 6 C -0.103 4.103 7 C -0.082 4.082 8 C -0.019 4.019 9 C -0.209 4.209 10 C 0.545 3.455 11 O -0.589 6.589 12 N -0.701 5.701 13 C 0.137 3.863 14 H 0.105 0.895 15 C -0.118 4.118 16 C 0.068 3.932 17 O -0.522 6.522 18 C 0.437 3.563 19 F -0.174 7.174 20 F -0.186 7.186 21 F -0.183 7.183 22 C -0.165 4.165 23 C -0.094 4.094 24 C -0.126 4.126 25 H 0.395 0.605 26 H 0.095 0.905 27 H -0.290 1.290 28 H -0.294 1.294 29 H 0.130 0.870 30 H 0.139 0.861 31 H 0.123 0.877 32 H 0.166 0.834 33 H 0.422 0.578 34 H 0.104 0.896 35 H 0.133 0.867 36 H 0.404 0.596 37 H 0.119 0.881 38 H 0.092 0.908 39 H 0.160 0.840 40 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.369 4.168 -3.267 5.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.200 4.200 3 Si 0.673 3.327 4 C -0.075 4.075 5 C -0.127 4.127 6 C -0.121 4.121 7 C -0.082 4.082 8 C -0.039 4.039 9 C -0.229 4.229 10 C 0.336 3.664 11 O -0.471 6.471 12 N -0.352 5.352 13 C 0.031 3.969 14 H 0.123 0.877 15 C -0.156 4.156 16 C 0.023 3.977 17 O -0.331 6.331 18 C 0.382 3.618 19 F -0.155 7.155 20 F -0.167 7.167 21 F -0.164 7.164 22 C -0.204 4.204 23 C -0.112 4.112 24 C -0.143 4.143 25 H 0.245 0.755 26 H 0.112 0.888 27 H -0.217 1.217 28 H -0.222 1.222 29 H 0.148 0.852 30 H 0.157 0.843 31 H 0.141 0.859 32 H 0.183 0.817 33 H 0.260 0.740 34 H 0.122 0.878 35 H 0.151 0.849 36 H 0.257 0.743 37 H 0.137 0.863 38 H 0.110 0.890 39 H 0.178 0.822 40 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 2.466 3.865 -3.114 5.543 hybrid contribution -1.584 0.189 0.369 1.637 sum 0.882 4.054 -2.745 4.975 Atomic orbital electron populations 1.86548 1.18562 1.80744 1.51067 1.25107 0.84072 1.12163 0.98652 0.94108 0.90220 0.71942 0.76404 1.19690 0.97891 0.94291 0.95650 1.21101 0.99159 0.94220 0.98204 1.21629 0.96421 1.00786 0.93250 1.19121 1.00154 0.94207 0.94697 1.22360 0.91211 0.99597 0.90708 1.23004 1.03608 1.02224 0.94052 1.18769 0.77449 0.86278 0.83873 1.90831 1.59116 1.17505 1.79637 1.45663 1.55445 1.13842 1.20242 1.22092 0.93461 0.98257 0.83062 0.87654 1.23577 0.99669 1.04156 0.88198 1.23265 1.00755 0.82601 0.91043 1.86621 1.72437 1.30766 1.43253 1.21302 0.73674 0.84499 0.82317 1.93185 1.82148 1.52535 1.87636 1.93183 1.83229 1.90334 1.49999 1.93217 1.33717 1.94509 1.94974 1.24289 0.95342 1.05588 0.95200 1.21648 0.98552 0.93249 0.97702 1.21174 0.98927 1.00385 0.93828 0.75464 0.88751 1.21727 1.22196 0.85163 0.84342 0.85873 0.81679 0.74002 0.87778 0.84866 0.74295 0.86259 0.88955 0.82234 0.83735 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.88 12.81 -148.98 -1.91 -2.79 16 2 C -0.09 0.15 2.79 71.24 0.20 0.35 16 3 Si 0.77 -2.75 29.84 68.60 2.05 -0.70 16 4 C -0.08 -0.06 5.39 -19.79 -0.11 -0.17 16 5 C -0.11 -0.18 9.66 22.23 0.21 0.03 16 6 C -0.10 -0.10 9.80 22.57 0.22 0.12 16 7 C -0.08 0.00 5.87 -20.15 -0.12 -0.12 16 8 C -0.02 -0.01 9.46 23.84 0.23 0.22 16 9 C -0.21 0.54 9.41 23.62 0.22 0.76 16 10 C 0.55 1.27 7.74 86.38 0.67 1.94 16 11 O -0.59 -7.07 15.85 -4.36 -0.07 -7.13 16 12 N -0.70 2.95 5.36 -444.24 -2.38 0.57 16 13 C 0.14 -0.32 4.15 45.52 0.19 -0.13 16 14 H 0.11 0.34 7.50 -2.39 -0.02 0.32 16 15 C -0.12 0.66 7.01 31.12 0.22 0.88 16 16 C 0.07 -0.21 1.36 -10.21 -0.01 -0.23 16 17 O -0.52 0.86 13.42 -148.98 -2.00 -1.14 16 18 C 0.44 -0.41 2.85 71.98 0.21 -0.20 16 19 F -0.17 0.22 15.76 44.97 0.71 0.93 16 20 F -0.19 -0.12 16.65 44.97 0.75 0.63 16 21 F -0.18 -0.38 17.18 44.97 0.77 0.39 16 22 C -0.17 0.62 7.16 31.18 0.22 0.84 16 23 C -0.09 0.27 9.41 22.58 0.21 0.48 16 24 C -0.13 0.20 8.65 22.23 0.19 0.39 16 25 H 0.39 -2.50 8.74 -74.05 -0.65 -3.15 16 26 H 0.09 -0.50 7.96 -2.39 -0.02 -0.52 16 27 H -0.29 -0.32 7.11 99.48 0.71 0.39 16 28 H -0.29 -0.88 7.04 99.48 0.70 -0.18 16 29 H 0.13 0.04 8.06 -2.91 -0.02 0.02 16 30 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 31 H 0.12 0.37 7.52 -2.91 -0.02 0.35 16 32 H 0.17 -1.68 6.07 -2.91 -0.02 -1.70 16 33 H 0.42 -4.76 8.69 -92.71 -0.81 -5.56 16 34 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 35 H 0.13 -1.34 7.85 -2.39 -0.02 -1.35 16 36 H 0.40 -3.05 8.42 -74.05 -0.62 -3.67 16 37 H 0.12 -0.69 7.14 -2.39 -0.02 -0.71 16 38 H 0.09 -0.22 8.14 -2.38 -0.02 -0.24 16 39 H 0.16 -1.49 6.17 -2.91 -0.02 -1.50 16 40 H 0.15 -0.77 4.84 -2.91 -0.01 -0.79 16 Total: 0.00 -22.93 355.03 -0.23 -23.15 By element: Atomic # 1 Polarization: -18.16 SS G_CDS: -0.90 Total: -19.06 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: 2.75 Total: 5.16 kcal Atomic # 7 Polarization: 2.95 SS G_CDS: -2.38 Total: 0.57 kcal Atomic # 8 Polarization: -7.09 SS G_CDS: -3.98 Total: -11.06 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 2.23 Total: 1.94 kcal Atomic # 14 Polarization: -2.75 SS G_CDS: 2.05 Total: -0.70 kcal Total: -22.93 -0.23 -23.15 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_12360594.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -166.768 kcal (2) G-P(sol) polarization free energy of solvation -22.928 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.696 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.154 kcal (6) G-S(sol) free energy of system = (1) + (5) -189.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds