Wall clock time and date at job start Thu Mar 4 2021 12:28:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.47259 * 2 1 4 4 C 1.50697 * 109.46996 * 120.00351 * 2 1 3 5 5 C 1.38899 * 119.67145 * 244.99995 * 4 2 1 6 6 C 1.36476 * 120.61227 * 179.97438 * 5 4 2 7 7 C 1.40068 * 119.83132 * 0.02562 * 6 5 4 8 8 C 1.41588 * 133.37841 * 180.02562 * 7 6 5 9 9 C 1.35869 * 107.72488 * 179.97438 * 8 7 6 10 10 C 1.47058 * 125.42297 * 180.02562 * 9 8 7 11 11 O 1.21650 * 120.00491 * 359.97438 * 10 9 8 12 12 N 1.34770 * 119.99780 * 179.97438 * 10 9 8 13 13 C 1.46504 * 120.00247 * 180.02562 * 12 10 9 14 14 H 1.08998 * 112.85148 * 25.32598 * 13 12 10 15 15 C 1.53775 * 113.61822 * 156.52870 * 13 12 10 16 16 C 1.53777 * 87.08461 * 139.97955 * 15 13 12 17 17 O 1.42903 * 113.61760 * 89.11557 * 16 15 13 18 18 C 1.53003 * 113.61538 * 219.93350 * 16 15 13 19 19 F 1.39902 * 109.46771 * 60.00216 * 18 16 15 20 20 F 1.39905 * 109.46863 * 179.97438 * 18 16 15 21 21 F 1.39897 * 109.46998 * 299.99672 * 18 16 15 22 22 C 1.53787 * 113.61306 * 254.13685 * 13 12 10 23 23 N 1.38146 * 109.14750 * 0.02562 * 9 8 7 24 24 C 1.37482 * 108.79016 * 359.97438 * 23 9 8 25 25 C 1.37712 * 119.67847 * 64.71865 * 4 2 1 26 26 H 0.96696 * 114.00036 * 299.99991 * 1 2 3 27 27 H 1.09001 * 109.47103 * 239.99639 * 2 1 3 28 28 H 1.48502 * 109.99925 * 178.68072 * 3 2 1 29 29 H 1.48497 * 109.99842 * 299.99834 * 3 2 1 30 30 H 1.07999 * 119.69457 * 359.97151 * 5 4 2 31 31 H 1.07999 * 120.08226 * 180.02562 * 6 5 4 32 32 H 1.07995 * 126.14043 * 359.96242 * 8 7 6 33 33 H 0.96998 * 120.00437 * 359.97438 * 12 10 9 34 34 H 1.08999 * 113.61268 * 254.52818 * 15 13 12 35 35 H 1.09001 * 113.61449 * 25.34540 * 15 13 12 36 36 H 0.96697 * 114.00264 * 180.02562 * 17 16 15 37 37 H 1.09000 * 113.60954 * 334.56298 * 22 13 12 38 38 H 1.08996 * 113.61439 * 105.46592 * 22 13 12 39 39 H 0.96996 * 125.60127 * 180.02562 * 23 9 8 40 40 H 1.07996 * 120.09387 * 0.03046 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6414 -0.0024 2.1915 6 6 3.1047 -0.6265 3.3133 7 6 2.8640 -1.9937 3.4998 8 6 3.2007 -2.9092 4.5261 9 6 2.7018 -4.1238 4.1769 10 6 2.8282 -5.3567 4.9684 11 8 3.4199 -5.3395 6.0311 12 7 2.2884 -6.5059 4.5163 13 6 2.4137 -7.7342 5.3050 14 1 2.5474 -7.5419 6.3695 15 6 1.3252 -8.7764 4.9992 16 6 2.4274 -9.8434 5.1059 17 8 2.6089 -10.3487 6.4303 18 6 2.3108 -10.9521 4.0579 19 9 2.3926 -10.3940 2.7777 20 9 3.3514 -11.8707 4.2331 21 9 1.0822 -11.6050 4.2046 22 6 3.4279 -8.7360 4.7280 23 7 2.0571 -4.0159 2.9599 24 6 2.1448 -2.7143 2.5260 25 6 1.6769 -2.0540 1.3936 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5139 -0.8900 28 1 3.5347 1.7702 0.0321 29 1 1.5616 2.4678 -1.2085 30 1 2.8286 1.0517 2.0498 31 1 3.6555 -0.0675 4.0554 32 1 3.7547 -2.6828 5.4250 33 1 1.8163 -6.5197 3.6691 34 1 0.5651 -8.8547 5.7765 35 1 0.9006 -8.6839 3.9996 36 1 3.3011 -11.0199 6.5038 37 1 3.5801 -8.6332 3.6536 38 1 4.3627 -8.7816 5.2866 39 1 1.6145 -4.7395 2.4893 40 1 1.1204 -2.5949 0.6426 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_13158378.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:33 Heat of formation + Delta-G solvation = -171.989738 kcal Electronic energy + Delta-G solvation = -31091.473856 eV Core-core repulsion = 26038.438699 eV Total energy + Delta-G solvation = -5053.035157 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.102 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -51.30004 -48.84270 -48.77804 -42.73401 -41.43148 -40.03321 -38.91164 -36.86939 -36.72673 -34.34892 -33.26880 -31.15264 -30.41213 -28.95936 -27.25158 -26.98183 -24.95312 -23.71477 -22.98235 -21.99873 -21.64184 -21.14970 -20.08442 -19.66104 -19.54841 -19.38925 -18.41358 -17.85347 -17.40528 -16.95678 -16.71988 -16.54982 -16.29108 -16.08613 -15.66588 -15.58177 -15.54836 -15.48500 -15.22034 -15.12553 -14.95488 -14.94196 -14.85072 -14.69889 -14.54708 -14.48139 -14.12352 -13.95728 -13.75024 -13.37949 -13.13747 -12.58498 -12.55644 -12.51579 -12.05406 -12.00993 -11.65033 -11.56545 -11.32323 -10.96354 -10.43422 -10.39669 -9.33708 -8.83804 -4.93721 -0.39165 0.52902 0.91616 1.34817 1.36398 1.69403 1.73946 1.92580 2.03166 2.11308 2.35862 2.52027 2.59620 2.77261 2.78676 3.28565 3.39194 3.42881 3.49119 3.59792 3.70819 3.74235 4.02861 4.04869 4.24552 4.29435 4.33729 4.35276 4.45376 4.49226 4.59725 4.62394 4.73252 4.77582 4.88607 4.98790 5.16275 5.33475 5.40725 5.53548 5.57676 5.97651 6.19074 6.23999 6.40334 6.80492 6.87217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.071 4.071 3 Si 0.776 3.224 4 C -0.089 4.089 5 C -0.146 4.146 6 C -0.058 4.058 7 C -0.135 4.135 8 C -0.115 4.115 9 C 0.009 3.991 10 C 0.590 3.410 11 O -0.555 6.555 12 N -0.702 5.702 13 C 0.139 3.861 14 H 0.115 0.885 15 C -0.120 4.120 16 C 0.069 3.931 17 O -0.520 6.520 18 C 0.436 3.564 19 F -0.175 7.175 20 F -0.185 7.185 21 F -0.183 7.183 22 C -0.165 4.165 23 N -0.564 5.564 24 C 0.108 3.892 25 C -0.111 4.111 26 H 0.396 0.604 27 H 0.108 0.892 28 H -0.287 1.287 29 H -0.303 1.303 30 H 0.149 0.851 31 H 0.149 0.851 32 H 0.156 0.844 33 H 0.414 0.586 34 H 0.107 0.893 35 H 0.132 0.868 36 H 0.405 0.595 37 H 0.118 0.882 38 H 0.097 0.903 39 H 0.432 0.568 40 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.821 1.369 -0.781 2.408 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.181 4.181 3 Si 0.682 3.318 4 C -0.091 4.091 5 C -0.165 4.165 6 C -0.076 4.076 7 C -0.140 4.140 8 C -0.142 4.142 9 C -0.101 4.101 10 C 0.378 3.622 11 O -0.432 6.432 12 N -0.353 5.353 13 C 0.034 3.966 14 H 0.133 0.867 15 C -0.158 4.158 16 C 0.025 3.975 17 O -0.329 6.329 18 C 0.382 3.618 19 F -0.156 7.156 20 F -0.167 7.167 21 F -0.164 7.164 22 C -0.204 4.204 23 N -0.170 5.170 24 C -0.003 4.003 25 C -0.132 4.132 26 H 0.246 0.754 27 H 0.126 0.874 28 H -0.214 1.214 29 H -0.231 1.231 30 H 0.166 0.834 31 H 0.166 0.834 32 H 0.174 0.826 33 H 0.251 0.749 34 H 0.125 0.875 35 H 0.150 0.850 36 H 0.258 0.742 37 H 0.136 0.864 38 H 0.116 0.884 39 H 0.272 0.728 40 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -1.375 1.832 -0.884 2.455 hybrid contribution 0.256 -1.929 -1.098 2.234 sum -1.119 -0.097 -1.982 2.278 Atomic orbital electron populations 1.86470 1.17109 1.82163 1.50564 1.25154 0.85315 1.10671 0.96936 0.93613 0.77952 0.75498 0.84690 1.20160 0.98566 0.93623 0.96779 1.20689 1.01001 1.00313 0.94460 1.20653 0.97548 0.91733 0.97686 1.18445 1.04370 0.95148 0.96006 1.21118 1.02404 0.90563 1.00134 1.19935 1.05395 0.95484 0.89269 1.17278 0.78288 0.82345 0.84308 1.90876 1.43433 1.85558 1.23349 1.45652 1.56956 1.07755 1.24972 1.22217 0.95668 0.81486 0.97267 0.86731 1.23584 0.96277 0.89500 1.06401 1.23217 1.02798 0.88941 0.82548 1.86622 1.62116 1.61585 1.22609 1.21313 0.73673 0.83767 0.83089 1.93184 1.95905 1.84855 1.41680 1.93190 1.58825 1.69462 1.95195 1.93218 1.44422 1.83124 1.95634 1.24299 0.99036 0.92631 1.04462 1.41776 1.48442 1.09105 1.17710 1.18432 1.00745 0.84421 0.96662 1.20001 1.02835 0.94208 0.96108 0.75407 0.87419 1.21358 1.23121 0.83441 0.83370 0.82592 0.74850 0.87476 0.85041 0.74182 0.86393 0.88422 0.72765 0.84799 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.92 12.82 -148.98 -1.91 -0.99 16 2 C -0.07 0.16 2.79 71.23 0.20 0.36 16 3 Si 0.78 -2.58 29.76 68.60 2.04 -0.54 16 4 C -0.09 0.13 5.36 -19.83 -0.11 0.03 16 5 C -0.15 0.38 8.59 22.02 0.19 0.57 16 6 C -0.06 0.05 10.06 22.30 0.22 0.28 16 7 C -0.14 -0.30 6.16 -21.36 -0.13 -0.43 16 8 C -0.11 -0.38 10.53 22.55 0.24 -0.14 16 9 C 0.01 0.01 6.97 39.91 0.28 0.29 16 10 C 0.59 1.37 7.80 86.56 0.68 2.05 16 11 O -0.55 -5.84 16.46 -4.19 -0.07 -5.91 16 12 N -0.70 3.52 5.36 -443.64 -2.38 1.15 16 13 C 0.14 -0.56 4.15 45.52 0.19 -0.37 16 14 H 0.11 0.07 7.50 -2.39 -0.02 0.06 16 15 C -0.12 0.83 7.01 31.12 0.22 1.04 16 16 C 0.07 -0.31 1.36 -10.21 -0.01 -0.33 16 17 O -0.52 1.63 13.41 -148.98 -2.00 -0.37 16 18 C 0.44 -0.82 2.86 71.98 0.21 -0.61 16 19 F -0.17 0.36 15.77 44.97 0.71 1.07 16 20 F -0.19 0.04 16.65 44.97 0.75 0.79 16 21 F -0.18 -0.24 17.18 44.97 0.77 0.53 16 22 C -0.17 0.88 7.16 31.18 0.22 1.10 16 23 N -0.56 1.85 6.07 -177.19 -1.08 0.78 16 24 C 0.11 0.05 7.25 39.13 0.28 0.33 16 25 C -0.11 0.08 9.68 22.37 0.22 0.29 16 26 H 0.40 -3.74 8.70 -74.06 -0.64 -4.38 16 27 H 0.11 -0.14 7.96 -2.39 -0.02 -0.16 16 28 H -0.29 -0.48 7.11 99.48 0.71 0.22 16 29 H -0.30 -1.38 7.11 99.48 0.71 -0.68 16 30 H 0.15 -1.04 4.85 -2.91 -0.01 -1.06 16 31 H 0.15 -0.73 8.06 -2.91 -0.02 -0.75 16 32 H 0.16 0.44 8.06 -2.91 -0.02 0.42 16 33 H 0.41 -4.74 7.77 -92.71 -0.72 -5.46 16 34 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 35 H 0.13 -1.46 7.86 -2.39 -0.02 -1.48 16 36 H 0.41 -3.61 8.42 -74.06 -0.62 -4.24 16 37 H 0.12 -0.84 7.15 -2.39 -0.02 -0.86 16 38 H 0.10 -0.43 8.14 -2.39 -0.02 -0.45 16 39 H 0.43 -4.38 8.12 -92.71 -0.75 -5.13 16 40 H 0.13 -0.37 8.06 -2.91 -0.02 -0.39 16 Total: 0.00 -22.28 354.20 -1.79 -24.07 By element: Atomic # 1 Polarization: -23.51 SS G_CDS: -1.52 Total: -25.03 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: 2.89 Total: 4.46 kcal Atomic # 7 Polarization: 5.38 SS G_CDS: -3.45 Total: 1.92 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -3.98 Total: -7.27 kcal Atomic # 9 Polarization: 0.16 SS G_CDS: 2.23 Total: 2.39 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.04 Total: -0.54 kcal Total: -22.28 -1.79 -24.07 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_13158378.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.920 kcal (2) G-P(sol) polarization free energy of solvation -22.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -170.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.793 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.070 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.990 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds