Wall clock time and date at job start Thu Mar 4 2021 12:28:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86292 * 109.47428 * 2 1 4 4 C 1.50699 * 109.47093 * 120.00062 * 2 1 3 5 5 C 1.38323 * 119.87662 * 244.72549 * 4 2 1 6 6 C 1.38020 * 120.12081 * 179.76306 * 5 4 2 7 7 C 1.39341 * 119.87703 * 0.51133 * 6 5 4 8 8 C 1.48391 * 120.12229 * 179.72267 * 7 6 5 9 9 C 1.39316 * 120.11768 * 56.67322 * 8 7 6 10 10 C 1.50704 * 120.06397 * 359.95257 * 9 8 7 11 11 C 1.50703 * 109.47056 * 84.32836 * 10 9 8 12 12 O 1.21287 * 119.99653 * 5.62272 * 11 10 9 13 13 N 1.34777 * 119.99738 * 185.62212 * 11 10 9 14 14 C 1.46500 * 119.99315 * 179.97438 * 13 11 10 15 15 H 1.08994 * 112.85576 * 336.19447 * 14 13 11 16 16 C 1.53786 * 113.61277 * 107.50740 * 14 13 11 17 17 C 1.53782 * 87.08005 * 139.97567 * 16 14 13 18 18 O 1.42898 * 113.69177 * 89.13032 * 17 16 14 19 19 C 1.53006 * 113.60984 * 220.01525 * 17 16 14 20 20 F 1.39907 * 109.46770 * 157.49904 * 19 17 16 21 21 F 1.39898 * 109.47288 * 277.49626 * 19 17 16 22 22 F 1.39899 * 109.47130 * 37.50388 * 19 17 16 23 23 C 1.53771 * 87.08434 * 334.56519 * 17 16 14 24 24 C 1.38044 * 119.87462 * 179.97438 * 9 8 7 25 25 C 1.38295 * 120.12349 * 359.97438 * 24 9 8 26 26 C 1.38341 * 120.24197 * 0.02562 * 25 24 9 27 27 C 1.38002 * 120.12060 * 359.73470 * 26 25 24 28 28 C 1.39337 * 119.75766 * 359.73856 * 7 6 5 29 29 C 1.38022 * 119.88009 * 0.02562 * 28 7 6 30 30 H 0.96691 * 113.99515 * 300.00209 * 1 2 3 31 31 H 1.09005 * 109.47125 * 239.99426 * 2 1 3 32 32 H 1.48506 * 110.00295 * 178.68087 * 3 2 1 33 33 H 1.48508 * 109.99968 * 299.99913 * 3 2 1 34 34 H 1.08001 * 119.94132 * 0.02562 * 5 4 2 35 35 H 1.08002 * 120.06578 * 180.24932 * 6 5 4 36 36 H 1.09007 * 109.47069 * 204.32884 * 10 9 8 37 37 H 1.08997 * 109.46978 * 324.33061 * 10 9 8 38 38 H 0.96992 * 120.00121 * 0.02562 * 13 11 10 39 39 H 1.09003 * 113.61092 * 254.52759 * 16 14 13 40 40 H 1.08998 * 113.61219 * 25.42776 * 16 14 13 41 41 H 0.96700 * 114.00726 * 82.45553 * 18 17 16 42 42 H 1.09000 * 113.62069 * 270.88863 * 23 17 16 43 43 H 1.09002 * 113.61914 * 139.98137 * 23 17 16 44 44 H 1.08003 * 119.93671 * 180.02562 * 24 9 8 45 45 H 1.07993 * 119.87779 * 179.97438 * 25 24 9 46 46 H 1.07996 * 119.94237 * 180.02562 * 26 25 24 47 47 H 1.08000 * 120.06039 * 180.27852 * 27 26 25 48 48 H 1.08004 * 120.06020 * 179.97438 * 28 7 6 49 49 H 1.07995 * 119.94164 * 180.02562 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6438 -0.0106 2.1875 6 6 3.1021 -0.6551 3.3187 7 6 2.8549 -2.0157 3.4905 8 6 3.3504 -2.7154 4.7017 9 6 2.9878 -2.2624 5.9682 10 6 2.0918 -1.0591 6.1118 11 6 0.6518 -1.4885 5.9962 12 8 0.3748 -2.6667 5.9175 13 7 -0.3280 -0.5632 5.9803 14 6 -1.7277 -0.9806 5.8674 15 1 -1.8413 -1.9599 5.4024 16 6 -2.5257 -0.8199 7.1722 17 6 -3.6965 -0.3306 6.3036 18 8 -4.5536 -1.3806 5.8510 19 6 -4.4657 0.8418 6.9159 20 9 -5.1364 1.5384 5.9047 21 9 -5.3944 0.3570 7.8431 22 9 -3.5697 1.7022 7.5594 23 6 -2.6453 0.0970 5.2660 24 6 3.4511 -2.9174 7.0915 25 6 4.2734 -4.0217 6.9613 26 6 4.6365 -4.4759 5.7060 27 6 4.1751 -3.8316 4.5762 28 6 2.1412 -2.7168 2.5207 29 6 1.6834 -2.0612 1.3957 30 1 -0.3932 0.4417 0.7650 31 1 1.7924 -0.5139 -0.8900 32 1 3.5348 1.7702 0.0321 33 1 1.5616 2.4678 -1.2086 34 1 2.8383 1.0430 2.0514 35 1 3.6548 -0.1070 4.0673 36 1 2.2563 -0.5977 7.0855 37 1 2.3206 -0.3399 5.3254 38 1 -0.1064 0.3790 6.0429 39 1 -2.7241 -1.7629 7.6816 40 1 -2.1256 -0.0544 7.8371 41 1 -5.2170 -1.6540 6.4993 42 1 -2.2779 1.1131 5.4097 43 1 -2.9403 -0.1057 4.2364 44 1 3.1703 -2.5673 8.0739 45 1 4.6339 -4.5309 7.8428 46 1 5.2785 -5.3390 5.6100 47 1 4.4556 -4.1897 3.5967 48 1 1.9472 -3.7715 2.6488 49 1 1.1298 -2.6036 0.6437 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_13158394.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:36 Heat of formation + Delta-G solvation = -180.487839 kcal Electronic energy + Delta-G solvation = -39701.897877 eV Core-core repulsion = 34146.392607 eV Total energy + Delta-G solvation = -5555.505270 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.138 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -51.22348 -48.76893 -48.69653 -41.64117 -41.03294 -40.03015 -39.34258 -37.54245 -36.56934 -34.39569 -33.95619 -33.34257 -31.95167 -30.72079 -29.31780 -28.20012 -27.12873 -26.55710 -24.35934 -23.88157 -23.42781 -22.62567 -21.77730 -21.49844 -21.05887 -19.95291 -19.51387 -19.41137 -18.58056 -18.00633 -17.92891 -17.37438 -16.86326 -16.80165 -16.66770 -16.45337 -16.13479 -16.11088 -15.70293 -15.56711 -15.52852 -15.45816 -15.34578 -15.14355 -14.92153 -14.88034 -14.82706 -14.72655 -14.56288 -14.38711 -14.20324 -14.07837 -13.82155 -13.67624 -13.61320 -13.35467 -13.24376 -13.18855 -12.85900 -12.45131 -12.35056 -12.23720 -12.01009 -11.92062 -11.87385 -11.60584 -11.33395 -10.92979 -10.44227 -10.14789 -10.08455 -9.94369 -9.72835 -9.21142 -5.00743 -0.08721 0.38178 0.41973 0.61671 1.32244 1.47790 1.66049 1.66720 1.99402 2.21052 2.44941 2.59891 2.63401 2.69101 2.86724 2.93529 3.40378 3.47915 3.50624 3.54496 3.59792 3.71100 3.76172 3.93122 3.96401 4.01160 4.04229 4.18552 4.20158 4.35434 4.39521 4.46601 4.46741 4.49368 4.54017 4.59663 4.60727 4.68986 4.72850 4.83135 4.86781 4.95046 5.00286 5.02889 5.12780 5.34066 5.41077 5.48537 5.49651 5.55305 5.59265 5.66640 5.93698 6.06469 6.28543 6.58993 6.77505 7.31637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.080 4.080 3 Si 0.787 3.213 4 C -0.120 4.120 5 C -0.108 4.108 6 C -0.108 4.108 7 C -0.042 4.042 8 C -0.051 4.051 9 C -0.061 4.061 10 C -0.110 4.110 11 C 0.519 3.481 12 O -0.574 6.574 13 N -0.706 5.706 14 C 0.141 3.859 15 H 0.098 0.902 16 C -0.165 4.165 17 C 0.066 3.934 18 O -0.524 6.524 19 C 0.437 3.563 20 F -0.183 7.183 21 F -0.187 7.187 22 F -0.172 7.172 23 C -0.117 4.117 24 C -0.116 4.116 25 C -0.126 4.126 26 C -0.128 4.128 27 C -0.122 4.122 28 C -0.115 4.115 29 C -0.100 4.100 30 H 0.394 0.606 31 H 0.100 0.900 32 H -0.283 1.283 33 H -0.303 1.303 34 H 0.155 0.845 35 H 0.155 0.845 36 H 0.135 0.865 37 H 0.131 0.869 38 H 0.421 0.579 39 H 0.088 0.912 40 H 0.122 0.878 41 H 0.403 0.597 42 H 0.137 0.863 43 H 0.102 0.898 44 H 0.140 0.860 45 H 0.139 0.861 46 H 0.136 0.864 47 H 0.123 0.877 48 H 0.111 0.889 49 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.455 5.805 4.424 7.700 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.189 4.189 3 Si 0.693 3.307 4 C -0.121 4.121 5 C -0.125 4.125 6 C -0.125 4.125 7 C -0.042 4.042 8 C -0.051 4.051 9 C -0.061 4.061 10 C -0.149 4.149 11 C 0.307 3.693 12 O -0.453 6.453 13 N -0.358 5.358 14 C 0.035 3.965 15 H 0.116 0.884 16 C -0.204 4.204 17 C 0.022 3.978 18 O -0.333 6.333 19 C 0.382 3.618 20 F -0.164 7.164 21 F -0.169 7.169 22 F -0.154 7.154 23 C -0.155 4.155 24 C -0.133 4.133 25 C -0.143 4.143 26 C -0.146 4.146 27 C -0.140 4.140 28 C -0.133 4.133 29 C -0.119 4.119 30 H 0.244 0.756 31 H 0.118 0.882 32 H -0.210 1.210 33 H -0.232 1.232 34 H 0.172 0.828 35 H 0.173 0.827 36 H 0.153 0.847 37 H 0.148 0.852 38 H 0.259 0.741 39 H 0.106 0.894 40 H 0.140 0.860 41 H 0.256 0.744 42 H 0.155 0.845 43 H 0.120 0.880 44 H 0.158 0.842 45 H 0.157 0.843 46 H 0.154 0.846 47 H 0.141 0.859 48 H 0.129 0.871 49 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 3.154 5.311 2.889 6.819 hybrid contribution -0.665 -0.850 0.227 1.103 sum 2.489 4.461 3.116 5.983 Atomic orbital electron populations 1.86486 1.17312 1.82235 1.50386 1.25296 0.85296 1.11303 0.96999 0.93781 0.77725 0.74495 0.84722 1.20444 0.99896 0.94472 0.97262 1.21148 0.97678 1.00303 0.93374 1.21403 0.99864 0.92829 0.98412 1.18866 0.97893 0.94116 0.93317 1.18735 0.98238 0.96037 0.92128 1.19473 0.97334 0.97281 0.92053 1.20984 0.88740 0.97280 1.07936 1.20918 0.88227 0.85613 0.74550 1.90748 1.84764 1.19571 1.50207 1.45739 1.04785 1.10701 1.74608 1.21974 0.79936 0.98946 0.95626 0.88416 1.24261 0.93650 1.04160 0.98328 1.23267 0.89222 0.85643 0.99691 1.86625 1.49511 1.51433 1.45686 1.21313 0.78453 0.85497 0.76529 1.93218 1.81743 1.81256 1.60203 1.93181 1.68157 1.87733 1.67822 1.93184 1.67399 1.72370 1.82427 1.23586 0.90886 1.01330 0.99657 1.21243 0.97491 0.95896 0.98719 1.21474 0.98011 0.96779 0.98082 1.21342 1.00388 1.00357 0.92537 1.21341 0.98084 0.95306 0.99318 1.21255 0.98220 0.99860 0.93980 1.20982 0.99022 0.94546 0.97313 0.75574 0.88224 1.21028 1.23189 0.82772 0.82707 0.84673 0.85171 0.74060 0.89370 0.85989 0.74439 0.84526 0.87986 0.84229 0.84333 0.84614 0.85872 0.87080 0.86333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.09 12.83 -148.98 -1.91 -2.00 16 2 C -0.08 0.07 2.80 71.24 0.20 0.27 16 3 Si 0.79 -3.08 29.79 68.60 2.04 -1.03 16 4 C -0.12 0.04 5.36 -19.82 -0.11 -0.06 16 5 C -0.11 0.45 8.65 22.24 0.19 0.64 16 6 C -0.11 0.34 7.75 22.48 0.17 0.52 16 7 C -0.04 -0.09 4.90 -20.04 -0.10 -0.19 16 8 C -0.05 -0.19 5.40 -20.05 -0.11 -0.30 16 9 C -0.06 -0.08 4.38 -19.65 -0.09 -0.16 16 10 C -0.11 0.59 5.33 29.10 0.16 0.75 16 11 C 0.52 -0.03 7.81 87.66 0.68 0.65 16 12 O -0.57 -6.17 15.65 -3.05 -0.05 -6.21 16 13 N -0.71 4.69 5.36 -440.01 -2.36 2.33 16 14 C 0.14 -0.53 4.18 45.52 0.19 -0.34 16 15 H 0.10 0.32 7.46 -2.39 -0.02 0.30 16 16 C -0.17 0.84 7.15 31.12 0.22 1.07 16 17 C 0.07 -0.27 1.36 -10.27 -0.01 -0.29 16 18 O -0.52 0.98 13.42 -148.98 -2.00 -1.02 16 19 C 0.44 -0.88 2.85 71.98 0.21 -0.67 16 20 F -0.18 -0.20 17.18 44.97 0.77 0.57 16 21 F -0.19 0.01 16.65 44.97 0.75 0.76 16 22 F -0.17 0.49 15.75 44.97 0.71 1.19 16 23 C -0.12 0.82 7.01 31.12 0.22 1.04 16 24 C -0.12 -0.14 9.67 22.24 0.21 0.08 16 25 C -0.13 -0.23 10.04 22.31 0.22 0.00 16 26 C -0.13 -0.37 10.03 22.24 0.22 -0.15 16 27 C -0.12 -0.54 9.62 22.48 0.22 -0.32 16 28 C -0.12 -0.55 9.62 22.48 0.22 -0.34 16 29 C -0.10 -0.35 9.67 22.24 0.22 -0.13 16 30 H 0.39 -3.32 8.70 -74.06 -0.64 -3.96 16 31 H 0.10 0.14 7.96 -2.38 -0.02 0.12 16 32 H -0.28 -0.16 7.11 99.48 0.71 0.55 16 33 H -0.30 -1.31 7.11 99.48 0.71 -0.60 16 34 H 0.16 -1.51 4.89 -2.91 -0.01 -1.53 16 35 H 0.16 -1.31 7.17 -2.91 -0.02 -1.33 16 36 H 0.14 -1.52 8.05 -2.38 -0.02 -1.54 16 37 H 0.13 -1.27 4.71 -2.39 -0.01 -1.28 16 38 H 0.42 -5.93 8.73 -92.71 -0.81 -6.74 16 39 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 40 H 0.12 -0.95 7.13 -2.39 -0.02 -0.97 16 41 H 0.40 -3.05 8.42 -74.06 -0.62 -3.67 16 42 H 0.14 -1.67 7.86 -2.39 -0.02 -1.69 16 43 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 44 H 0.14 -0.43 8.06 -2.91 -0.02 -0.46 16 45 H 0.14 -0.30 8.06 -2.91 -0.02 -0.32 16 46 H 0.14 -0.09 8.06 -2.91 -0.02 -0.11 16 47 H 0.12 0.38 8.06 -2.91 -0.02 0.35 16 48 H 0.11 0.73 8.06 -2.91 -0.02 0.70 16 49 H 0.12 0.48 8.06 -2.91 -0.02 0.45 16 Total: 0.00 -26.12 420.12 0.12 -26.01 By element: Atomic # 1 Polarization: -21.67 SS G_CDS: -0.98 Total: -22.65 kcal Atomic # 6 Polarization: -1.08 SS G_CDS: 3.14 Total: 2.06 kcal Atomic # 7 Polarization: 4.69 SS G_CDS: -2.36 Total: 2.33 kcal Atomic # 8 Polarization: -5.28 SS G_CDS: -3.96 Total: -9.24 kcal Atomic # 9 Polarization: 0.30 SS G_CDS: 2.23 Total: 2.53 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: 2.04 Total: -1.03 kcal Total: -26.12 0.12 -26.01 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_13158394.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.479 kcal (2) G-P(sol) polarization free energy of solvation -26.125 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.604 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.009 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.488 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds