Wall clock time and date at job start Thu Mar 4 2021 12:28:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.47145 * 2 1 4 4 C 1.50705 * 109.46880 * 119.99633 * 2 1 3 5 5 C 1.34708 * 125.66327 * 65.00563 * 4 2 1 6 6 C 1.40963 * 107.02947 * 179.97438 * 5 4 2 7 7 C 1.35934 * 106.74172 * 359.97438 * 6 5 4 8 8 C 1.47816 * 125.92903 * 179.97438 * 7 6 5 9 9 C 1.39805 * 120.00473 * 0.02562 * 8 7 6 10 10 C 1.37811 * 120.25115 * 179.97438 * 9 8 7 11 11 C 1.38779 * 120.23989 * 359.74589 * 10 9 8 12 12 O 1.35653 * 120.00086 * 180.25438 * 11 10 9 13 13 C 1.40253 * 119.99374 * 0.50916 * 11 10 9 14 14 C 1.47568 * 120.11577 * 179.76871 * 13 11 10 15 15 O 1.21583 * 120.00271 * 359.72267 * 14 13 11 16 16 N 1.34777 * 119.99459 * 179.71958 * 14 13 11 17 17 C 1.46499 * 119.99665 * 179.72392 * 16 14 13 18 18 H 1.09004 * 112.85025 * 334.94284 * 17 16 14 19 19 C 1.53777 * 113.61716 * 106.14251 * 17 16 14 20 20 C 1.53950 * 87.02326 * 139.95030 * 19 17 16 21 21 O 1.42898 * 113.53569 * 89.19084 * 20 19 17 22 22 C 1.53002 * 113.66691 * 220.06834 * 20 19 17 23 23 F 1.39904 * 109.46749 * 157.55973 * 22 20 19 24 24 F 1.39897 * 109.47225 * 277.55714 * 22 20 19 25 25 F 1.39899 * 109.47106 * 37.56377 * 22 20 19 26 26 C 1.53779 * 87.10991 * 334.63899 * 20 19 17 27 27 C 1.39210 * 120.00091 * 179.97438 * 8 7 6 28 28 O 1.34335 * 125.66836 * 245.22327 * 4 2 1 29 29 H 0.96701 * 114.00215 * 299.99965 * 1 2 3 30 30 H 1.09001 * 109.47089 * 239.99494 * 2 1 3 31 31 H 1.48490 * 109.99875 * 299.99766 * 3 2 1 32 32 H 1.48498 * 109.99998 * 61.31802 * 3 2 1 33 33 H 1.08004 * 126.48674 * 359.97215 * 5 4 2 34 34 H 1.08005 * 126.62751 * 180.02562 * 6 5 4 35 35 H 1.08011 * 119.87387 * 359.95987 * 9 8 7 36 36 H 1.07991 * 119.87876 * 179.97438 * 10 9 8 37 37 H 0.96703 * 113.99794 * 270.25285 * 12 11 10 38 38 H 0.97001 * 120.00485 * 0.02562 * 16 14 13 39 39 H 1.08996 * 113.61392 * 254.53373 * 19 17 16 40 40 H 1.09007 * 113.61140 * 25.42982 * 19 17 16 41 41 H 0.96700 * 114.00263 * 82.50657 * 21 20 19 42 42 H 1.08996 * 113.61654 * 270.80826 * 26 20 19 43 43 H 1.09006 * 113.68763 * 139.92279 * 26 20 19 44 44 H 1.08000 * 120.11997 * 0.02562 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7570 -2.0167 1.5094 6 6 2.3821 -2.2612 2.7490 7 6 2.9092 -1.0781 3.1618 8 6 3.6597 -0.8533 4.4152 9 6 3.8809 -1.9148 5.2977 10 6 4.5805 -1.7111 6.4674 11 6 5.0751 -0.4516 6.7756 12 8 5.7675 -0.2576 7.9259 13 6 4.8545 0.6218 5.9002 14 6 5.3749 1.9633 6.2277 15 8 5.9918 2.1407 7.2603 16 7 5.1663 2.9918 5.3821 17 6 5.6777 4.3249 5.7100 18 1 5.8070 4.4769 6.7816 19 6 6.9030 4.7368 4.8772 20 6 6.2808 6.1431 4.8048 21 8 6.6682 6.9948 5.8848 22 6 6.4302 6.8111 3.4364 23 9 5.4477 7.7961 3.2886 24 9 7.6967 7.3975 3.3396 25 9 6.2827 5.8506 2.4300 26 6 4.9164 5.4652 5.0137 27 6 4.1473 0.4153 4.7166 28 8 2.6235 -0.1452 2.2335 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5139 -0.8899 31 1 1.5615 2.4678 -1.2084 32 1 1.5878 2.4585 1.2242 33 1 1.2368 -2.7399 0.8988 34 1 2.4332 -3.2061 3.2696 35 1 3.5019 -2.8984 5.0618 36 1 4.7475 -2.5352 7.1449 37 1 5.2151 -0.0124 8.6808 38 1 4.6739 2.8504 4.5584 39 1 7.8403 4.7011 5.4324 40 1 6.9628 4.2355 3.9111 41 1 7.5256 7.4240 5.7593 42 1 4.4319 5.1636 4.0850 43 1 4.2510 6.0160 5.6786 44 1 3.9780 1.2368 4.0361 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_13259648.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:44 Heat of formation + Delta-G solvation = -223.955054 kcal Electronic energy + Delta-G solvation = -37935.314361 eV Core-core repulsion = 32179.861205 eV Total energy + Delta-G solvation = -5755.453156 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.106 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -51.26415 -48.80346 -48.74250 -43.68480 -41.79957 -40.83430 -39.37746 -38.20062 -37.82675 -36.60199 -34.50022 -34.06441 -32.73668 -32.21377 -30.04210 -28.80527 -27.21023 -26.38170 -25.65330 -24.10065 -23.41003 -22.78180 -21.80220 -21.55736 -21.09640 -20.06188 -19.62126 -19.52221 -19.41709 -19.15231 -18.35846 -17.75397 -17.47893 -17.35895 -16.87477 -16.76167 -16.44678 -16.30345 -16.13638 -15.86828 -15.78034 -15.58369 -15.46963 -15.37909 -15.18200 -14.91977 -14.90535 -14.72013 -14.47214 -14.40076 -14.34580 -13.98961 -13.90904 -13.77931 -13.71688 -13.53423 -13.30064 -13.20245 -13.08963 -12.87553 -12.51329 -12.12916 -11.97147 -11.87328 -11.38360 -11.05186 -10.92709 -10.78043 -10.48127 -10.33809 -10.12893 -8.89426 -4.95245 -0.55157 -0.20295 0.78375 1.16770 1.41272 1.47996 1.49614 1.71394 1.84734 1.93251 1.99863 2.38144 2.55022 2.61487 2.64909 2.82929 3.12282 3.22671 3.31107 3.33053 3.44677 3.46244 3.52287 3.66837 3.90901 4.03292 4.04748 4.09839 4.22113 4.36526 4.38157 4.40405 4.46613 4.62772 4.65151 4.68925 4.75910 4.80649 4.84918 4.90838 5.03488 5.15585 5.22102 5.32189 5.45825 5.51926 5.99744 6.26181 6.35801 6.36168 6.73615 7.07350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.038 4.038 3 Si 0.766 3.234 4 C -0.053 4.053 5 C -0.182 4.182 6 C -0.190 4.190 7 C 0.025 3.975 8 C -0.041 4.041 9 C -0.044 4.044 10 C -0.147 4.147 11 C 0.165 3.835 12 O -0.495 6.495 13 C -0.179 4.179 14 C 0.561 3.439 15 O -0.554 6.554 16 N -0.706 5.706 17 C 0.140 3.860 18 H 0.111 0.889 19 C -0.165 4.165 20 C 0.070 3.930 21 O -0.521 6.521 22 C 0.437 3.563 23 F -0.183 7.183 24 F -0.185 7.185 25 F -0.173 7.173 26 C -0.122 4.122 27 C -0.050 4.050 28 O -0.172 6.172 29 H 0.390 0.610 30 H 0.151 0.849 31 H -0.288 1.288 32 H -0.281 1.281 33 H 0.161 0.839 34 H 0.174 0.826 35 H 0.164 0.836 36 H 0.163 0.837 37 H 0.410 0.590 38 H 0.414 0.586 39 H 0.095 0.905 40 H 0.119 0.881 41 H 0.405 0.595 42 H 0.130 0.870 43 H 0.105 0.895 44 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.464 -3.316 -1.561 3.947 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.147 4.147 3 Si 0.670 3.330 4 C -0.103 4.103 5 C -0.201 4.201 6 C -0.209 4.209 7 C -0.025 4.025 8 C -0.042 4.042 9 C -0.062 4.062 10 C -0.166 4.166 11 C 0.118 3.882 12 O -0.308 6.308 13 C -0.183 4.183 14 C 0.350 3.650 15 O -0.433 6.433 16 N -0.359 5.359 17 C 0.034 3.966 18 H 0.129 0.871 19 C -0.204 4.204 20 C 0.025 3.975 21 O -0.330 6.330 22 C 0.382 3.618 23 F -0.165 7.165 24 F -0.166 7.166 25 F -0.154 7.154 26 C -0.159 4.159 27 C -0.069 4.069 28 O -0.070 6.070 29 H 0.240 0.760 30 H 0.169 0.831 31 H -0.215 1.215 32 H -0.207 1.207 33 H 0.178 0.822 34 H 0.191 0.809 35 H 0.182 0.818 36 H 0.180 0.820 37 H 0.271 0.729 38 H 0.252 0.748 39 H 0.113 0.887 40 H 0.137 0.863 41 H 0.258 0.742 42 H 0.148 0.852 43 H 0.123 0.877 44 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -1.143 -2.645 -1.466 3.232 hybrid contribution -1.032 0.291 -0.011 1.072 sum -2.174 -2.353 -1.477 3.528 Atomic orbital electron populations 1.86644 1.17377 1.80442 1.50039 1.24528 0.83490 1.12540 0.94138 0.93715 0.90319 0.71603 0.77399 1.23015 1.01112 0.93982 0.92187 1.21795 1.03952 0.95983 0.98344 1.22152 1.02120 0.99140 0.97504 1.20423 1.03435 0.87672 0.90972 1.17687 1.00396 0.94535 0.91544 1.21421 0.94439 0.99209 0.91165 1.21574 0.98827 0.97032 0.99122 1.18890 0.89649 0.91732 0.87903 1.84712 1.36321 1.91153 1.18660 1.20223 1.05733 0.93608 0.98722 1.18260 0.78976 0.84612 0.83195 1.90822 1.41393 1.84618 1.26437 1.45748 1.57684 1.07953 1.24487 1.22139 0.93529 0.80532 1.00371 0.87109 1.24296 1.00388 0.92254 1.03493 1.23215 1.01997 0.90085 0.82165 1.86617 1.43935 1.63174 1.39252 1.21284 0.73675 0.77337 0.89515 1.93216 1.62708 1.64040 1.96495 1.93186 1.41435 1.85235 1.96760 1.93188 1.95362 1.63287 1.63582 1.23588 0.93825 0.94510 1.04019 1.21417 0.93581 0.97312 0.94545 1.83899 1.58226 1.38108 1.26729 0.76030 0.83128 1.21461 1.20686 0.82157 0.80893 0.81824 0.81953 0.72874 0.74756 0.88655 0.86261 0.74228 0.85217 0.87658 0.83141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.37 12.88 -148.98 -1.92 -1.55 16 2 C -0.04 0.13 2.98 71.24 0.21 0.34 16 3 Si 0.77 -2.92 32.11 68.60 2.20 -0.72 16 4 C -0.05 0.07 6.20 24.88 0.15 0.23 16 5 C -0.18 0.22 10.78 22.13 0.24 0.46 16 6 C -0.19 0.46 10.26 22.40 0.23 0.69 16 7 C 0.02 -0.03 7.03 24.27 0.17 0.14 16 8 C -0.04 0.10 5.87 -20.13 -0.12 -0.02 16 9 C -0.04 0.22 9.54 22.55 0.22 0.44 16 10 C -0.15 0.50 9.96 22.30 0.22 0.72 16 11 C 0.16 0.25 6.72 22.89 0.15 0.40 16 12 O -0.49 -1.92 11.55 -68.69 -0.79 -2.71 16 13 C -0.18 -0.22 5.88 -20.04 -0.12 -0.34 16 14 C 0.56 2.25 7.76 86.71 0.67 2.92 16 15 O -0.55 -6.44 14.76 17.01 0.25 -6.19 16 16 N -0.71 1.69 5.31 -443.18 -2.35 -0.66 16 17 C 0.14 -0.27 4.15 45.52 0.19 -0.08 16 18 H 0.11 0.30 7.50 -2.39 -0.02 0.28 16 19 C -0.17 0.59 7.16 31.18 0.22 0.81 16 20 C 0.07 -0.21 1.36 -10.21 -0.01 -0.23 16 21 O -0.52 0.98 13.41 -148.98 -2.00 -1.01 16 22 C 0.44 -0.39 2.85 71.98 0.21 -0.18 16 23 F -0.18 -0.41 17.18 44.97 0.77 0.36 16 24 F -0.18 -0.09 16.65 44.97 0.75 0.66 16 25 F -0.17 0.22 15.76 44.97 0.71 0.93 16 26 C -0.12 0.60 7.01 31.12 0.22 0.82 16 27 C -0.05 0.12 9.20 22.79 0.21 0.33 16 28 O -0.17 0.12 8.80 -6.44 -0.06 0.06 16 29 H 0.39 -2.31 8.70 -74.06 -0.64 -2.95 16 30 H 0.15 -0.97 7.96 -2.39 -0.02 -0.99 16 31 H -0.29 -0.79 7.11 99.48 0.71 -0.08 16 32 H -0.28 -0.15 7.11 99.48 0.71 0.55 16 33 H 0.16 -0.50 8.06 -2.91 -0.02 -0.52 16 34 H 0.17 -1.26 7.25 -2.91 -0.02 -1.28 16 35 H 0.16 -1.67 6.96 -2.90 -0.02 -1.69 16 36 H 0.16 -1.18 8.06 -2.92 -0.02 -1.20 16 37 H 0.41 -1.29 9.06 -74.05 -0.67 -1.97 16 38 H 0.41 -3.24 6.74 -92.71 -0.62 -3.86 16 39 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 40 H 0.12 -0.65 7.14 -2.38 -0.02 -0.67 16 41 H 0.40 -3.17 8.43 -74.06 -0.62 -3.79 16 42 H 0.13 -1.15 7.85 -2.39 -0.02 -1.16 16 43 H 0.10 -0.47 8.14 -2.38 -0.02 -0.49 16 44 H 0.15 -1.01 6.24 -2.91 -0.02 -1.03 16 Total: 0.00 -23.74 393.56 -0.74 -24.48 By element: Atomic # 1 Polarization: -19.75 SS G_CDS: -1.37 Total: -21.11 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: 3.07 Total: 7.45 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -2.35 Total: -0.66 kcal Atomic # 8 Polarization: -6.88 SS G_CDS: -4.52 Total: -11.40 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 2.23 Total: 1.96 kcal Atomic # 14 Polarization: -2.92 SS G_CDS: 2.20 Total: -0.72 kcal Total: -23.74 -0.74 -24.48 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_13259648.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -199.475 kcal (2) G-P(sol) polarization free energy of solvation -23.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -223.216 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.480 kcal (6) G-S(sol) free energy of system = (1) + (5) -223.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds