Wall clock time and date at job start Thu Mar 4 2021 12:28:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38977 * 119.95822 * 2 1 4 4 O 1.35709 * 119.90944 * 0.02562 * 3 2 1 5 5 C 1.39022 * 120.17751 * 179.74146 * 3 2 1 6 6 C 1.50699 * 119.95359 * 180.27900 * 5 3 2 7 7 O 1.42903 * 109.47236 * 285.00265 * 6 5 3 8 8 Si 1.86300 * 109.47095 * 165.00430 * 6 5 3 9 9 C 1.37670 * 120.08633 * 0.26323 * 5 3 2 10 10 C 1.39751 * 119.91765 * 359.97438 * 9 5 3 11 11 C 1.47606 * 120.09395 * 179.97438 * 10 9 5 12 12 O 1.21583 * 119.99537 * 359.97438 * 11 10 9 13 13 N 1.34777 * 120.00403 * 179.97438 * 11 10 9 14 14 C 1.46492 * 120.00127 * 179.97438 * 13 11 10 15 15 H 1.09006 * 112.85068 * 23.80174 * 14 13 11 16 16 C 1.53775 * 113.61456 * 154.99988 * 14 13 11 17 17 C 1.53788 * 87.08317 * 139.98228 * 16 14 13 18 18 O 1.42899 * 113.61266 * 89.11313 * 17 16 14 19 19 C 1.53001 * 113.61340 * 219.93833 * 17 16 14 20 20 F 1.39893 * 109.47269 * 59.99635 * 19 17 16 21 21 F 1.39902 * 109.46651 * 179.97438 * 19 17 16 22 22 F 1.39903 * 109.46803 * 299.99596 * 19 17 16 23 23 C 1.53778 * 113.61389 * 252.50047 * 14 13 11 24 24 C 1.37727 * 119.95943 * 180.25900 * 2 1 3 25 25 H 1.09004 * 109.47453 * 89.99763 * 1 2 3 26 26 H 1.08999 * 109.47233 * 209.99878 * 1 2 3 27 27 H 1.08999 * 109.47446 * 330.00044 * 1 2 3 28 28 H 0.96700 * 114.00111 * 269.72265 * 4 3 2 29 29 H 1.08997 * 109.47194 * 45.00307 * 6 5 3 30 30 H 0.96695 * 114.00167 * 300.00496 * 7 6 5 31 31 H 1.48498 * 109.99937 * 58.67645 * 8 6 5 32 32 H 1.48500 * 110.00070 * 179.97438 * 8 6 5 33 33 H 1.08010 * 120.04485 * 179.97438 * 9 5 3 34 34 H 0.97002 * 119.99600 * 359.97438 * 13 11 10 35 35 H 1.08999 * 113.61710 * 254.52701 * 16 14 13 36 36 H 1.09003 * 113.61635 * 25.35176 * 16 14 13 37 37 H 0.96707 * 113.99303 * 179.97438 * 18 17 16 38 38 H 1.08997 * 113.61700 * 334.56378 * 23 14 13 39 39 H 1.09000 * 113.61979 * 105.46819 * 23 14 13 40 40 H 1.08002 * 120.03779 * 0.02562 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 0.0054 6 6 4.3385 2.5180 0.0118 7 8 4.2770 3.1080 -1.2883 8 14 6.1180 2.2145 0.4724 9 6 4.2858 0.0208 0.0053 10 6 3.5918 -1.1921 0.0003 11 6 4.3328 -2.4688 -0.0003 12 8 5.5486 -2.4659 0.0030 13 7 3.6616 -3.6375 -0.0046 14 6 4.3970 -4.9045 -0.0059 15 1 5.4034 -4.8102 0.4021 16 6 3.6004 -6.0797 0.5850 17 6 4.1929 -6.9446 -0.5402 18 8 5.4398 -7.5532 -0.1981 19 6 3.1941 -7.9345 -1.1429 20 9 2.1102 -7.2333 -1.6820 21 9 3.8206 -8.6722 -2.1531 22 9 2.7381 -8.8026 -0.1451 23 6 4.3430 -5.6468 -1.3515 24 6 2.1947 -1.1932 -0.0054 25 1 -0.3634 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3634 0.8900 0.5138 28 1 1.3256 2.7203 -0.8827 29 1 3.8850 3.1920 0.7384 30 1 4.6634 2.5621 -1.9867 31 1 6.7388 1.2719 -0.4927 32 1 6.8661 3.4973 0.4816 33 1 5.3659 0.0258 0.0091 34 1 2.6916 -3.6397 -0.0069 35 1 3.9303 -6.3737 1.5814 36 1 2.5199 -5.9528 0.5171 37 1 5.8172 -8.0988 -0.9018 38 1 3.4655 -5.4023 -1.9502 39 1 5.2722 -5.5913 -1.9185 40 1 1.6547 -2.1285 -0.0100 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_13287732.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:28:59 Heat of formation + Delta-G solvation = -252.058046 kcal Electronic energy + Delta-G solvation = -31088.571142 eV Core-core repulsion = 26035.259962 eV Total energy + Delta-G solvation = -5053.311180 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.106 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.25789 -48.80061 -48.73371 -41.87515 -41.11495 -39.91031 -37.97126 -37.51405 -36.66344 -34.40130 -33.93076 -31.73233 -28.81836 -27.97587 -27.18778 -26.90465 -25.35397 -23.55027 -22.08804 -21.70642 -21.23982 -20.03211 -19.56587 -19.54985 -19.45500 -18.75900 -18.14328 -17.54070 -17.04705 -16.76194 -16.53816 -16.31458 -16.06610 -15.96269 -15.81561 -15.58563 -15.42764 -15.30284 -15.17655 -14.91461 -14.89477 -14.73981 -14.50197 -14.31865 -14.09282 -13.98965 -13.83321 -13.69292 -13.32121 -13.29424 -12.90919 -12.74906 -12.50731 -12.47557 -11.94473 -11.91307 -11.63674 -11.39975 -11.11666 -10.64090 -10.30480 -9.97573 -9.65169 -5.00721 -0.40462 0.07716 1.20839 1.42208 1.51051 1.56500 1.84243 2.00086 2.39420 2.53306 2.56885 2.64899 2.84368 3.14520 3.33767 3.34868 3.45500 3.46835 3.49828 3.56983 3.70609 4.01273 4.10026 4.18345 4.39883 4.40176 4.42357 4.49657 4.64549 4.65058 4.74404 4.78371 4.83321 4.85671 5.05467 5.09191 5.22359 5.32247 5.34327 5.60490 6.26947 6.37805 6.40257 6.71391 7.05779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.119 4.119 3 C 0.157 3.843 4 O -0.497 6.497 5 C -0.152 4.152 6 C -0.061 4.061 7 O -0.539 6.539 8 Si 0.743 3.257 9 C -0.065 4.065 10 C -0.151 4.151 11 C 0.563 3.437 12 O -0.574 6.574 13 N -0.700 5.700 14 C 0.137 3.863 15 H 0.110 0.890 16 C -0.119 4.119 17 C 0.068 3.932 18 O -0.521 6.521 19 C 0.437 3.563 20 F -0.173 7.173 21 F -0.186 7.186 22 F -0.183 7.183 23 C -0.166 4.166 24 C -0.052 4.052 25 H 0.083 0.917 26 H 0.086 0.914 27 H 0.069 0.931 28 H 0.412 0.588 29 H 0.126 0.874 30 H 0.385 0.615 31 H -0.288 1.288 32 H -0.292 1.292 33 H 0.132 0.868 34 H 0.418 0.582 35 H 0.105 0.895 36 H 0.134 0.866 37 H 0.404 0.596 38 H 0.120 0.880 39 H 0.093 0.907 40 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.573 -1.421 -0.282 5.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.120 4.120 3 C 0.112 3.888 4 O -0.310 6.310 5 C -0.153 4.153 6 C -0.171 4.171 7 O -0.347 6.347 8 Si 0.650 3.350 9 C -0.084 4.084 10 C -0.154 4.154 11 C 0.352 3.648 12 O -0.454 6.454 13 N -0.352 5.352 14 C 0.032 3.968 15 H 0.128 0.872 16 C -0.157 4.157 17 C 0.024 3.976 18 O -0.330 6.330 19 C 0.382 3.618 20 F -0.155 7.155 21 F -0.168 7.168 22 F -0.164 7.164 23 C -0.204 4.204 24 C -0.071 4.071 25 H 0.102 0.898 26 H 0.105 0.895 27 H 0.088 0.912 28 H 0.272 0.728 29 H 0.144 0.856 30 H 0.235 0.765 31 H -0.215 1.215 32 H -0.220 1.220 33 H 0.150 0.850 34 H 0.257 0.743 35 H 0.123 0.877 36 H 0.152 0.848 37 H 0.257 0.743 38 H 0.139 0.861 39 H 0.112 0.888 40 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -4.276 -0.668 0.946 4.430 hybrid contribution -0.290 -0.558 -2.418 2.498 sum -4.566 -1.226 -1.472 4.952 Atomic orbital electron populations 1.20772 0.88277 1.04262 1.03599 1.20442 0.98307 0.91720 1.01514 1.18468 0.88665 0.85963 0.95730 1.84627 1.75492 1.35670 1.35240 1.20480 0.94145 0.95344 1.05331 1.24831 1.09981 0.93979 0.88358 1.86578 1.82848 1.48352 1.16961 0.93943 0.73351 0.77642 0.90108 1.21116 1.00433 0.90997 0.95815 1.19756 0.94344 0.92434 1.08836 1.18389 0.86772 0.84521 0.75111 1.90806 1.15255 1.88059 1.51298 1.45667 1.10967 1.04210 1.74326 1.22161 0.97510 0.81244 0.95907 0.87184 1.23597 1.02257 0.91134 0.98722 1.23207 0.84849 0.89281 1.00268 1.86626 1.32646 1.68349 1.45409 1.21298 0.82351 0.81716 0.76423 1.93182 1.57301 1.78376 1.86628 1.93186 1.82064 1.79182 1.62324 1.93218 1.90073 1.71990 1.61129 1.24270 1.05997 0.91882 0.98294 1.21387 0.91570 0.99117 0.95020 0.89822 0.89473 0.91154 0.72797 0.85630 0.76539 1.21485 1.21950 0.85040 0.74251 0.87666 0.84824 0.74285 0.86139 0.88792 0.81729 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.88 9.78 71.23 0.70 1.57 16 2 C -0.12 0.49 5.89 -19.81 -0.12 0.37 16 3 C 0.16 -0.15 6.66 22.64 0.15 0.00 16 4 O -0.50 0.82 11.84 -90.29 -1.07 -0.25 16 5 C -0.15 -0.07 5.27 -19.81 -0.10 -0.18 16 6 C -0.06 -0.04 2.37 71.24 0.17 0.13 16 7 O -0.54 -0.77 12.88 -148.98 -1.92 -2.69 16 8 Si 0.74 1.31 30.24 68.60 2.07 3.38 16 9 C -0.06 -0.14 8.20 22.50 0.18 0.04 16 10 C -0.15 0.01 5.87 -20.08 -0.12 -0.11 16 11 C 0.56 1.40 7.76 86.72 0.67 2.07 16 12 O -0.57 -6.51 15.94 -3.98 -0.06 -6.57 16 13 N -0.70 3.38 5.30 -443.15 -2.35 1.03 16 14 C 0.14 -0.50 4.17 45.52 0.19 -0.31 16 15 H 0.11 0.18 7.46 -2.38 -0.02 0.16 16 16 C -0.12 0.81 7.01 31.12 0.22 1.03 16 17 C 0.07 -0.30 1.36 -10.26 -0.01 -0.31 16 18 O -0.52 1.45 13.41 -148.98 -2.00 -0.55 16 19 C 0.44 -0.90 2.85 71.98 0.21 -0.70 16 20 F -0.17 0.45 15.76 44.97 0.71 1.16 16 21 F -0.19 0.07 16.65 44.97 0.75 0.82 16 22 F -0.18 -0.20 17.18 44.97 0.77 0.57 16 23 C -0.17 0.86 7.15 31.12 0.22 1.08 16 24 C -0.05 0.29 9.18 22.51 0.21 0.50 16 25 H 0.08 -0.80 8.14 -2.38 -0.02 -0.82 16 26 H 0.09 -0.92 8.08 -2.39 -0.02 -0.94 16 27 H 0.07 -0.38 7.52 -2.39 -0.02 -0.40 16 28 H 0.41 -3.32 9.06 -74.06 -0.67 -3.99 16 29 H 0.13 0.04 7.82 -2.39 -0.02 0.02 16 30 H 0.39 -1.44 8.70 -74.06 -0.64 -2.08 16 31 H -0.29 -2.02 6.68 99.48 0.66 -1.35 16 32 H -0.29 -2.38 7.11 99.48 0.71 -1.67 16 33 H 0.13 0.60 4.43 -2.91 -0.01 0.59 16 34 H 0.42 -4.88 6.75 -92.71 -0.63 -5.51 16 35 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 36 H 0.13 -1.52 7.86 -2.39 -0.02 -1.54 16 37 H 0.40 -3.46 8.42 -74.05 -0.62 -4.09 16 38 H 0.12 -0.90 7.14 -2.39 -0.02 -0.92 16 39 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 40 H 0.17 -2.15 6.39 -2.91 -0.02 -2.17 16 Total: 0.00 -21.73 350.62 -1.92 -23.65 By element: Atomic # 1 Polarization: -24.35 SS G_CDS: -1.39 Total: -25.74 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: 2.56 Total: 5.20 kcal Atomic # 7 Polarization: 3.38 SS G_CDS: -2.35 Total: 1.03 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -5.05 Total: -10.06 kcal Atomic # 9 Polarization: 0.31 SS G_CDS: 2.23 Total: 2.54 kcal Atomic # 14 Polarization: 1.31 SS G_CDS: 2.07 Total: 3.38 kcal Total: -21.73 -1.92 -23.65 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_13287732.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -228.408 kcal (2) G-P(sol) polarization free energy of solvation -21.726 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -250.134 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.924 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -252.058 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds