Wall clock time and date at job start Thu Mar 4 2021 12:29:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86299 * 109.46954 * 2 1 4 4 C 1.50696 * 109.47056 * 239.99676 * 2 1 3 5 5 C 1.38509 * 119.80099 * 120.02651 * 4 2 1 6 6 C 1.37829 * 120.29847 * 179.72286 * 5 4 2 7 7 C 1.39679 * 119.90760 * 0.48314 * 6 5 4 8 8 C 1.47534 * 120.18855 * 179.79018 * 7 6 5 9 9 O 1.21596 * 119.99607 * 179.72274 * 8 7 6 10 10 N 1.34770 * 120.00549 * 359.72896 * 8 7 6 11 11 C 1.46502 * 120.00436 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.90486 * 23.74437 * 11 10 8 13 13 C 1.53778 * 113.61609 * 154.99924 * 11 10 8 14 14 C 1.53774 * 87.07981 * 139.97971 * 13 11 10 15 15 O 1.42903 * 113.61673 * 89.11770 * 14 13 11 16 16 C 1.52996 * 113.61287 * 219.93089 * 14 13 11 17 17 F 1.39905 * 109.47244 * 298.46993 * 16 14 13 18 18 F 1.39897 * 109.47292 * 58.47368 * 16 14 13 19 19 F 1.39906 * 109.47203 * 178.47589 * 16 14 13 20 20 C 1.53776 * 87.08537 * 334.56708 * 14 13 11 21 21 C 1.40166 * 119.61439 * 359.51845 * 7 6 5 22 22 O 1.35655 * 120.15109 * 180.27335 * 21 7 6 23 23 C 1.38093 * 119.80880 * 300.00137 * 4 2 1 24 24 H 0.96696 * 113.99712 * 60.00200 * 1 2 3 25 25 H 1.08999 * 109.46430 * 120.00022 * 2 1 3 26 26 H 1.48498 * 110.00179 * 298.67725 * 3 2 1 27 27 H 1.48501 * 109.99974 * 60.00378 * 3 2 1 28 28 H 1.08001 * 119.85312 * 359.97346 * 5 4 2 29 29 H 1.08004 * 120.04940 * 180.27931 * 6 5 4 30 30 H 0.97000 * 120.00070 * 359.97438 * 10 8 7 31 31 H 1.08996 * 113.61425 * 25.42944 * 13 11 10 32 32 H 1.09002 * 113.60959 * 254.52814 * 13 11 10 33 33 H 0.96700 * 114.00311 * 179.97438 * 15 14 13 34 34 H 1.09002 * 113.61807 * 139.98218 * 20 14 13 35 35 H 1.09003 * 113.61352 * 270.88748 * 20 14 13 36 36 H 0.96697 * 113.99796 * 89.99696 * 22 21 7 37 37 H 1.08003 * 119.95828 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7279 -0.0336 -2.1392 6 6 3.1976 -0.6750 -3.2650 7 6 2.8614 -2.0108 -3.4969 8 6 3.3570 -2.7021 -4.7023 9 8 3.0662 -3.8664 -4.8982 10 7 4.1319 -2.0432 -5.5864 11 6 4.6245 -2.7299 -6.7832 12 1 4.0053 -3.5800 -7.0696 13 6 4.9456 -1.7807 -7.9497 14 6 6.1801 -2.6570 -8.2196 15 8 5.9260 -3.7454 -9.1101 16 6 7.4280 -1.8575 -8.5996 17 9 7.1864 -1.1503 -9.7824 18 9 7.7362 -0.9583 -7.5733 19 9 8.5024 -2.7329 -8.7910 20 6 6.1276 -3.0513 -6.7341 21 6 2.0551 -2.6922 -2.5748 22 8 1.7265 -3.9912 -2.7863 23 6 1.5953 -2.0326 -1.4449 24 1 -0.3933 0.4417 -0.7650 25 1 1.7923 -0.5139 0.8900 26 1 1.5880 2.4585 -1.2242 27 1 1.5615 2.4679 1.2085 28 1 2.9854 1.0003 -1.9628 29 1 3.8221 -0.1447 -3.9687 30 1 4.3636 -1.1143 -5.4304 31 1 5.1906 -0.7670 -7.6330 32 1 4.2071 -1.8082 -8.7509 33 1 6.6988 -4.3000 -9.2840 34 1 6.3432 -4.1045 -6.5540 35 1 6.6957 -2.3848 -6.0851 36 1 2.3523 -4.6223 -2.4053 37 1 0.9738 -2.5537 -0.7317 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:29:17 Heat of formation + Delta-G solvation = -246.357833 kcal Electronic energy + Delta-G solvation = -28931.039783 eV Core-core repulsion = 24033.513402 eV Total energy + Delta-G solvation = -4897.526381 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.091 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -51.24440 -48.78390 -48.72226 -41.83269 -40.93878 -39.58831 -38.46923 -37.23514 -36.58517 -34.36473 -32.53272 -31.09730 -28.91908 -27.44048 -27.17820 -24.52706 -23.88652 -23.08932 -21.70311 -21.38946 -20.02947 -19.56332 -19.46746 -19.34252 -18.69471 -18.28769 -17.52205 -16.98055 -16.71337 -16.51826 -16.27334 -16.08207 -15.94431 -15.79463 -15.56778 -15.43795 -15.19436 -15.16491 -14.90085 -14.88148 -14.82159 -14.56502 -14.35797 -13.92707 -13.73318 -13.68763 -13.36604 -13.19082 -12.86673 -12.51239 -12.36928 -12.15432 -11.93477 -11.61155 -11.36932 -10.97217 -10.66293 -10.28759 -10.01487 -9.77643 -4.89648 -0.41368 0.16407 1.29001 1.43367 1.63526 1.68041 2.00867 2.03284 2.40338 2.55214 2.58734 2.65811 2.85427 3.13556 3.35829 3.38194 3.46950 3.48186 3.51354 3.69754 3.78180 4.08337 4.11910 4.28493 4.41217 4.43292 4.45749 4.63587 4.65343 4.77828 4.78680 4.86661 5.04077 5.15741 5.25627 5.35536 5.61247 6.27710 6.43050 6.45174 6.72392 7.12965 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.095 4.095 3 Si 0.782 3.218 4 C -0.070 4.070 5 C -0.132 4.132 6 C -0.051 4.051 7 C -0.180 4.180 8 C 0.559 3.441 9 O -0.561 6.561 10 N -0.701 5.701 11 C 0.138 3.862 12 H 0.105 0.895 13 C -0.121 4.121 14 C 0.068 3.932 15 O -0.523 6.523 16 C 0.437 3.563 17 F -0.184 7.184 18 F -0.172 7.172 19 F -0.186 7.186 20 C -0.162 4.162 21 C 0.153 3.847 22 O -0.499 6.499 23 C -0.141 4.141 24 H 0.388 0.612 25 H 0.129 0.871 26 H -0.273 1.273 27 H -0.308 1.308 28 H 0.164 0.836 29 H 0.172 0.828 30 H 0.418 0.582 31 H 0.135 0.865 32 H 0.101 0.899 33 H 0.405 0.595 34 H 0.094 0.906 35 H 0.123 0.877 36 H 0.408 0.592 37 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.086 4.844 1.684 7.223 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.202 4.202 3 Si 0.686 3.314 4 C -0.070 4.070 5 C -0.149 4.149 6 C -0.069 4.069 7 C -0.184 4.184 8 C 0.348 3.652 9 O -0.440 6.440 10 N -0.354 5.354 11 C 0.033 3.967 12 H 0.123 0.877 13 C -0.159 4.159 14 C 0.023 3.977 15 O -0.332 6.332 16 C 0.383 3.617 17 F -0.165 7.165 18 F -0.154 7.154 19 F -0.167 7.167 20 C -0.201 4.201 21 C 0.106 3.894 22 O -0.313 6.313 23 C -0.160 4.160 24 H 0.237 0.763 25 H 0.146 0.854 26 H -0.200 1.200 27 H -0.237 1.237 28 H 0.181 0.819 29 H 0.189 0.811 30 H 0.257 0.743 31 H 0.153 0.847 32 H 0.120 0.880 33 H 0.257 0.743 34 H 0.112 0.888 35 H 0.141 0.859 36 H 0.268 0.732 37 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 3.730 4.996 1.763 6.479 hybrid contribution 0.006 -0.580 -0.355 0.680 sum 3.736 4.417 1.408 5.954 Atomic orbital electron populations 1.86601 1.18463 1.80481 1.50228 1.25496 0.83577 1.12702 0.98454 0.94035 0.89835 0.70872 0.76673 1.20501 0.96355 0.93503 0.96686 1.21248 0.98463 1.01213 0.93958 1.21523 0.96803 0.91341 0.97278 1.20417 1.03811 0.96883 0.97273 1.18337 0.77732 0.85975 0.83189 1.90828 1.58430 1.18045 1.76700 1.45662 1.51391 1.16221 1.22161 1.22103 0.93945 0.96377 0.84303 0.87699 1.23607 0.94618 0.99060 0.98585 1.23208 0.91962 0.90050 0.92444 1.86627 1.40648 1.40402 1.65525 1.21279 0.86308 0.79272 0.74877 1.93217 1.94320 1.80042 1.48922 1.93185 1.93912 1.69306 1.58953 1.93190 1.59396 1.69001 1.95122 1.24252 0.97813 1.05239 0.92822 1.18756 0.92859 0.85655 0.92083 1.84721 1.52701 1.13469 1.80362 1.21332 1.01953 0.95613 0.97083 0.76305 0.85370 1.19958 1.23712 0.81923 0.81099 0.74275 0.84695 0.88022 0.74267 0.88756 0.85909 0.73248 0.84938 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.32 12.76 -148.98 -1.90 -2.22 16 2 C -0.09 0.37 2.81 71.23 0.20 0.57 16 3 Si 0.78 -5.02 29.77 68.60 2.04 -2.98 16 4 C -0.07 0.24 5.39 -19.84 -0.11 0.14 16 5 C -0.13 0.99 8.64 22.24 0.19 1.18 16 6 C -0.05 0.37 9.54 22.52 0.21 0.59 16 7 C -0.18 -0.04 5.89 -20.01 -0.12 -0.16 16 8 C 0.56 1.75 7.76 86.70 0.67 2.42 16 9 O -0.56 -6.82 14.76 16.89 0.25 -6.57 16 10 N -0.70 3.22 5.30 -443.20 -2.35 0.87 16 11 C 0.14 -0.43 4.17 45.52 0.19 -0.24 16 12 H 0.11 0.31 7.47 -2.39 -0.02 0.29 16 13 C -0.12 0.75 7.03 31.12 0.22 0.97 16 14 C 0.07 -0.28 1.34 -10.27 -0.01 -0.30 16 15 O -0.52 1.20 13.41 -148.98 -2.00 -0.79 16 16 C 0.44 -0.93 2.84 71.98 0.20 -0.73 16 17 F -0.18 -0.24 17.20 44.97 0.77 0.54 16 18 F -0.17 0.51 15.75 44.97 0.71 1.22 16 19 F -0.19 0.10 16.69 44.97 0.75 0.85 16 20 C -0.16 0.87 7.15 31.12 0.22 1.09 16 21 C 0.15 0.54 6.72 22.84 0.15 0.69 16 22 O -0.50 -3.41 11.58 -68.79 -0.80 -4.21 16 23 C -0.14 -0.12 9.53 22.34 0.21 0.09 16 24 H 0.39 -1.95 8.70 -74.06 -0.64 -2.59 16 25 H 0.13 -0.68 7.96 -2.39 -0.02 -0.70 16 26 H -0.27 1.01 7.11 99.48 0.71 1.72 16 27 H -0.31 -0.83 7.11 99.48 0.71 -0.12 16 28 H 0.16 -2.11 4.85 -2.91 -0.01 -2.12 16 29 H 0.17 -2.64 6.40 -2.91 -0.02 -2.66 16 30 H 0.42 -4.97 6.76 -92.71 -0.63 -5.60 16 31 H 0.14 -1.50 7.80 -2.39 -0.02 -1.52 16 32 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 33 H 0.40 -3.37 8.46 -74.06 -0.63 -4.00 16 34 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 35 H 0.12 -0.99 7.18 -2.39 -0.02 -1.01 16 36 H 0.41 -0.13 9.06 -74.06 -0.67 -0.80 16 37 H 0.13 0.22 8.06 -2.91 -0.02 0.20 16 Total: 0.00 -25.22 329.26 -1.60 -26.83 By element: Atomic # 1 Polarization: -18.54 SS G_CDS: -1.32 Total: -19.86 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: 2.24 Total: 6.33 kcal Atomic # 7 Polarization: 3.22 SS G_CDS: -2.35 Total: 0.87 kcal Atomic # 8 Polarization: -9.35 SS G_CDS: -4.45 Total: -13.79 kcal Atomic # 9 Polarization: 0.37 SS G_CDS: 2.23 Total: 2.60 kcal Atomic # 14 Polarization: -5.02 SS G_CDS: 2.04 Total: -2.98 kcal Total: -25.22 -1.60 -26.83 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -219.533 kcal (2) G-P(sol) polarization free energy of solvation -25.224 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -244.757 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.601 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.825 kcal (6) G-S(sol) free energy of system = (1) + (5) -246.358 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds