Wall clock time and date at job start Thu Mar 4 2021 12:29:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86301 * 109.46705 * 2 1 4 4 C 1.50696 * 109.47131 * 120.00035 * 2 1 3 5 5 C 1.31115 * 118.54801 * 250.02547 * 4 2 1 6 6 N 1.38918 * 121.84975 * 179.61970 * 5 4 2 7 7 C 1.47035 * 118.88423 * 13.28646 * 6 5 4 8 8 C 1.53557 * 107.64564 * 316.32746 * 7 6 5 9 9 C 1.50201 * 118.54824 * 69.99884 * 4 2 1 10 10 C 1.50702 * 109.33057 * 320.31306 * 9 4 2 11 11 O 1.21283 * 120.00262 * 239.99982 * 10 9 4 12 12 N 1.34777 * 119.99928 * 59.71887 * 10 9 4 13 13 C 1.46499 * 120.00199 * 180.27479 * 12 10 9 14 14 H 1.09003 * 112.85060 * 334.67209 * 13 12 10 15 15 C 1.53779 * 113.61441 * 105.86649 * 13 12 10 16 16 C 1.53947 * 87.02241 * 139.95690 * 15 13 12 17 17 O 1.42897 * 113.54193 * 89.18772 * 16 15 13 18 18 C 1.53002 * 113.74396 * 220.06107 * 16 15 13 19 19 F 1.39893 * 109.47607 * 157.59363 * 18 16 15 20 20 F 1.39906 * 109.46611 * 277.59400 * 18 16 15 21 21 F 1.39897 * 109.47281 * 37.58964 * 18 16 15 22 22 C 1.53776 * 113.61859 * 203.47296 * 13 12 10 23 23 H 0.96699 * 113.99592 * 300.00097 * 1 2 3 24 24 H 1.08991 * 109.46783 * 240.00288 * 2 1 3 25 25 H 1.48505 * 109.99476 * 178.68070 * 3 2 1 26 26 H 1.48495 * 110.00552 * 299.99792 * 3 2 1 27 27 H 1.08001 * 119.07391 * 359.59094 * 5 4 2 28 28 H 0.97003 * 120.56185 * 193.26844 * 6 5 4 29 29 H 1.08998 * 109.81620 * 75.88043 * 7 6 5 30 30 H 1.08997 * 109.82077 * 196.79591 * 7 6 5 31 31 H 1.09005 * 109.63892 * 301.25195 * 8 7 6 32 32 H 1.08999 * 109.62134 * 180.68622 * 8 7 6 33 33 H 1.09005 * 109.33047 * 79.96204 * 9 4 2 34 34 H 0.97000 * 120.00317 * 0.28382 * 12 10 9 35 35 H 1.09003 * 113.61529 * 254.53261 * 15 13 12 36 36 H 1.09000 * 113.61712 * 25.43319 * 15 13 12 37 37 H 0.96698 * 113.99879 * 82.50801 * 17 16 15 38 38 H 1.08999 * 113.61316 * 334.57022 * 22 13 12 39 39 H 1.09003 * 113.61523 * 105.38807 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.5112 -0.0028 2.1697 6 7 2.9923 -0.5858 3.3352 7 6 3.1180 -2.0494 3.3977 8 6 1.8459 -2.6525 2.7846 9 6 1.7452 -2.1977 1.3269 10 6 0.3897 -2.5671 0.7816 11 8 -0.4196 -3.1228 1.4938 12 7 0.0748 -2.2750 -0.4959 13 6 -1.2450 -2.6287 -1.0242 14 1 -1.7013 -3.4666 -0.4972 15 6 -2.1841 -1.4228 -1.1938 16 6 -2.6442 -2.0686 -2.5133 17 8 -3.7455 -2.9656 -2.3562 18 6 -2.8520 -1.0661 -3.6503 19 9 -2.7610 -1.7288 -4.8790 20 9 -4.1164 -0.4795 -3.5294 21 9 -1.8689 -0.0732 -3.5821 22 6 -1.2776 -2.7725 -2.5549 23 1 -0.3932 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8900 25 1 3.5346 1.7703 0.0321 26 1 1.5615 2.4680 -1.2084 27 1 2.6182 1.0632 2.0332 28 1 3.2414 -0.0365 4.0950 29 1 3.9908 -2.3700 2.8288 30 1 3.2150 -2.3680 4.4356 31 1 0.9728 -2.3055 3.3374 32 1 1.9000 -3.7404 2.8258 33 1 2.5177 -2.6968 0.7417 34 1 0.7220 -1.8306 -1.0655 35 1 -2.9666 -1.3688 -0.4369 36 1 -1.6599 -0.4769 -1.3302 37 1 -4.6077 -2.5287 -2.3294 38 1 -0.5050 -2.1963 -3.0641 39 1 -1.3278 -3.8068 -2.8954 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_15608500.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:29:47 Heat of formation + Delta-G solvation = -197.358941 kcal Electronic energy + Delta-G solvation = -29862.309638 eV Core-core repulsion = 25165.541333 eV Total energy + Delta-G solvation = -4696.768305 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.118 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -51.25040 -48.78680 -48.73498 -41.70130 -40.51783 -38.94336 -37.55333 -36.41349 -34.09422 -33.06867 -32.61058 -28.84344 -27.27053 -27.03570 -25.92358 -23.80664 -23.12570 -21.67202 -21.27138 -19.95410 -19.55351 -19.43633 -19.24421 -18.82049 -17.94166 -17.37748 -17.10321 -16.60059 -16.41385 -16.03297 -15.79738 -15.59979 -15.53675 -15.43166 -15.17335 -15.01576 -14.92989 -14.90750 -14.85455 -14.44921 -14.30229 -14.02443 -13.98003 -13.63357 -13.51059 -13.14968 -13.12744 -12.58002 -12.30089 -12.09331 -11.93634 -11.86606 -11.67778 -11.34667 -11.26567 -10.66587 -10.20527 -9.73679 -8.38736 -4.91807 1.33896 1.44952 1.48760 1.70212 1.86202 2.07299 2.34922 2.44432 2.60010 2.70385 2.72133 2.93539 3.41251 3.51585 3.60563 3.66669 3.79678 3.89746 4.03998 4.15263 4.27994 4.37977 4.43264 4.49103 4.58764 4.61367 4.67900 4.76062 4.83372 4.86383 4.92275 5.16575 5.26869 5.31646 5.50816 5.63960 6.29802 6.36665 6.70229 6.89761 7.01862 7.42111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.048 4.048 3 Si 0.754 3.246 4 C -0.298 4.298 5 C 0.163 3.837 6 N -0.747 5.747 7 C 0.122 3.878 8 C -0.117 4.117 9 C -0.038 4.038 10 C 0.535 3.465 11 O -0.592 6.592 12 N -0.682 5.682 13 C 0.145 3.855 14 H 0.098 0.902 15 C -0.149 4.149 16 C 0.065 3.935 17 O -0.523 6.523 18 C 0.436 3.564 19 F -0.186 7.186 20 F -0.185 7.185 21 F -0.174 7.174 22 C -0.123 4.123 23 H 0.384 0.616 24 H 0.105 0.895 25 H -0.294 1.294 26 H -0.308 1.308 27 H 0.151 0.849 28 H 0.414 0.586 29 H 0.065 0.935 30 H 0.096 0.904 31 H 0.059 0.941 32 H 0.072 0.928 33 H 0.099 0.901 34 H 0.408 0.592 35 H 0.087 0.913 36 H 0.129 0.871 37 H 0.403 0.597 38 H 0.121 0.879 39 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.341 3.315 3.723 6.610 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.159 4.159 3 Si 0.662 3.338 4 C -0.309 4.309 5 C 0.040 3.960 6 N -0.377 5.377 7 C -0.003 4.003 8 C -0.155 4.155 9 C -0.059 4.059 10 C 0.323 3.677 11 O -0.473 6.473 12 N -0.334 5.334 13 C 0.039 3.961 14 H 0.116 0.884 15 C -0.188 4.188 16 C 0.020 3.980 17 O -0.332 6.332 18 C 0.381 3.619 19 F -0.167 7.167 20 F -0.167 7.167 21 F -0.156 7.156 22 C -0.161 4.161 23 H 0.233 0.767 24 H 0.123 0.877 25 H -0.222 1.222 26 H -0.236 1.236 27 H 0.168 0.832 28 H 0.250 0.750 29 H 0.083 0.917 30 H 0.115 0.885 31 H 0.078 0.922 32 H 0.090 0.910 33 H 0.117 0.883 34 H 0.248 0.752 35 H 0.105 0.895 36 H 0.147 0.853 37 H 0.256 0.744 38 H 0.139 0.861 39 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 4.826 2.644 3.230 6.380 hybrid contribution -0.284 0.391 -0.734 0.879 sum 4.541 3.035 2.496 6.006 Atomic orbital electron populations 1.86577 1.17146 1.81527 1.49961 1.24668 0.85599 1.08526 0.97153 0.94052 0.77470 0.76824 0.85429 1.20494 1.14900 0.94069 1.01464 1.20585 0.92053 0.96831 0.86505 1.44678 1.71362 1.06520 1.15173 1.21655 0.96192 0.80202 1.02240 1.21649 0.98837 1.00757 0.94300 1.19682 0.93667 0.94906 0.97629 1.20700 0.89204 0.76216 0.81530 1.90678 1.52723 1.44921 1.58943 1.45830 1.15558 1.59700 1.12267 1.21887 0.84502 0.97303 0.92424 0.88416 1.24242 1.00052 1.00857 0.93620 1.23362 0.91242 0.90671 0.92698 1.86605 1.17501 1.34111 1.94976 1.21373 0.73922 0.82103 0.84508 1.93200 1.95818 1.80532 1.47158 1.93177 1.41799 1.85710 1.95983 1.93190 1.62382 1.63715 1.96304 1.23529 0.92081 1.03407 0.97080 0.76683 0.87740 1.22162 1.23616 0.83247 0.75016 0.91670 0.88534 0.92204 0.90978 0.88323 0.75175 0.89466 0.85326 0.74444 0.86074 0.88350 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.98 6.97 -148.98 -1.04 1.94 16 2 C -0.05 0.28 1.74 71.23 0.12 0.41 16 3 Si 0.75 -4.10 29.72 68.60 2.04 -2.06 16 4 C -0.30 1.32 5.14 -16.76 -0.09 1.24 16 5 C 0.16 -1.04 9.62 83.42 0.80 -0.23 16 6 N -0.75 5.11 5.83 -345.87 -2.02 3.10 16 7 C 0.12 -0.68 7.16 86.46 0.62 -0.06 16 8 C -0.12 0.05 4.92 30.79 0.15 0.20 16 9 C -0.04 0.04 2.74 -12.43 -0.03 0.00 16 10 C 0.54 2.12 6.37 87.66 0.56 2.68 16 11 O -0.59 -7.62 15.42 -3.04 -0.05 -7.66 16 12 N -0.68 0.28 3.17 -440.04 -1.39 -1.11 16 13 C 0.14 0.15 4.15 45.52 0.19 0.34 16 14 H 0.10 0.63 7.50 -2.39 -0.02 0.61 16 15 C -0.15 0.12 6.57 31.18 0.20 0.32 16 16 C 0.06 0.00 1.36 -10.21 -0.01 -0.01 16 17 O -0.52 -0.48 13.41 -148.98 -2.00 -2.47 16 18 C 0.44 0.97 2.85 71.98 0.21 1.17 16 19 F -0.19 -0.96 17.18 44.97 0.77 -0.19 16 20 F -0.19 -0.55 16.65 44.97 0.75 0.20 16 21 F -0.17 -0.47 15.77 44.97 0.71 0.24 16 22 C -0.12 0.15 7.01 31.12 0.22 0.37 16 23 H 0.38 -3.65 8.70 -74.06 -0.64 -4.30 16 24 H 0.11 -0.70 6.39 -2.39 -0.02 -0.72 16 25 H -0.29 -0.06 7.11 99.48 0.71 0.65 16 26 H -0.31 -1.06 7.11 99.48 0.71 -0.35 16 27 H 0.15 -1.60 4.48 -2.91 -0.01 -1.61 16 28 H 0.41 -4.42 8.96 -92.71 -0.83 -5.25 16 29 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 30 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 31 H 0.06 0.26 7.75 -2.38 -0.02 0.24 16 32 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 33 H 0.10 -0.28 8.14 -2.38 -0.02 -0.30 16 34 H 0.41 -1.60 5.65 -92.71 -0.52 -2.12 16 35 H 0.09 -0.01 8.14 -2.39 -0.02 -0.03 16 36 H 0.13 -0.20 5.25 -2.39 -0.01 -0.21 16 37 H 0.40 -2.12 8.42 -74.06 -0.62 -2.75 16 38 H 0.12 -0.51 7.85 -2.39 -0.02 -0.52 16 39 H 0.10 -0.07 8.14 -2.39 -0.02 -0.09 16 Total: 0.00 -18.81 317.78 -0.71 -19.52 By element: Atomic # 1 Polarization: -16.51 SS G_CDS: -1.42 Total: -17.93 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: 2.94 Total: 6.43 kcal Atomic # 7 Polarization: 5.40 SS G_CDS: -3.41 Total: 1.99 kcal Atomic # 8 Polarization: -5.11 SS G_CDS: -3.08 Total: -8.20 kcal Atomic # 9 Polarization: -1.98 SS G_CDS: 2.23 Total: 0.25 kcal Atomic # 14 Polarization: -4.10 SS G_CDS: 2.04 Total: -2.06 kcal Total: -18.81 -0.71 -19.52 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_15608500.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -177.836 kcal (2) G-P(sol) polarization free energy of solvation -18.815 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -196.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.522 kcal (6) G-S(sol) free energy of system = (1) + (5) -197.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds