Wall clock time and date at job start Thu Mar 4 2021 12:30:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35985 * 117.00072 * 2 1 4 4 C 1.38671 * 119.99683 * 180.02562 * 3 2 1 5 5 C 1.38162 * 119.99500 * 180.02562 * 4 3 2 6 6 C 1.50701 * 119.99680 * 179.97438 * 5 4 3 7 7 O 1.42903 * 109.46878 * 104.99895 * 6 5 4 8 8 Si 1.86303 * 109.47233 * 345.00125 * 6 5 4 9 9 C 1.38667 * 120.00198 * 0.25007 * 5 4 3 10 10 O 1.35984 * 120.00351 * 179.72652 * 9 5 4 11 11 C 1.42897 * 117.00314 * 180.02562 * 10 9 5 12 12 C 1.50700 * 109.47196 * 179.97438 * 11 10 9 13 13 O 1.21283 * 119.99789 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00190 * 179.97438 * 12 11 10 15 15 C 1.46498 * 120.00161 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.84921 * 23.81087 * 15 14 12 17 17 C 1.53782 * 113.61426 * 155.00575 * 15 14 12 18 18 C 1.53788 * 87.07926 * 139.98163 * 17 15 14 19 19 O 1.42900 * 113.60906 * 89.11862 * 18 17 15 20 20 C 1.53000 * 113.61259 * 219.93216 * 18 17 15 21 21 F 1.39900 * 109.46932 * 60.00268 * 20 18 17 22 22 F 1.39898 * 109.46957 * 180.02562 * 20 18 17 23 23 F 1.39901 * 109.47274 * 300.00418 * 20 18 17 24 24 C 1.53778 * 87.07993 * 334.56806 * 18 17 15 25 25 C 1.38723 * 119.99810 * 359.51956 * 9 5 4 26 26 C 1.38101 * 120.00185 * 0.46124 * 25 9 5 27 27 H 1.09003 * 109.47170 * 300.00150 * 1 2 3 28 28 H 1.09005 * 109.47291 * 59.99409 * 1 2 3 29 29 H 1.08997 * 109.47356 * 179.97438 * 1 2 3 30 30 H 1.07999 * 120.00361 * 0.04436 * 4 3 2 31 31 H 1.09002 * 109.47060 * 225.00026 * 6 5 4 32 32 H 0.96696 * 114.00096 * 60.00145 * 7 6 5 33 33 H 1.48504 * 109.99730 * 300.00042 * 8 6 5 34 34 H 1.48495 * 110.00156 * 61.31631 * 8 6 5 35 35 H 1.08994 * 109.47546 * 300.00122 * 11 10 9 36 36 H 1.09005 * 109.47048 * 60.00337 * 11 10 9 37 37 H 0.97002 * 119.99806 * 0.02562 * 14 12 11 38 38 H 1.08998 * 113.61087 * 254.53182 * 17 15 14 39 39 H 1.09000 * 113.61177 * 25.43489 * 17 15 14 40 40 H 0.96706 * 113.99389 * 179.97438 * 19 18 17 41 41 H 1.08995 * 113.61264 * 270.87825 * 24 18 17 42 42 H 1.09008 * 113.61056 * 139.98129 * 24 18 17 43 43 H 1.08003 * 119.99663 * 180.22514 * 25 9 5 44 44 H 1.08007 * 120.00325 * 179.77316 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2841 -0.0005 5 6 4.0585 2.5152 0.0000 6 6 5.5634 2.5940 0.0000 7 8 6.0208 2.9677 -1.3013 8 14 6.2723 0.9319 0.4538 9 6 3.3032 3.6781 0.0063 10 8 3.9206 4.8898 0.0125 11 6 3.0807 6.0458 0.0193 12 6 3.9349 7.2873 0.0261 13 8 5.1439 7.1915 0.0247 14 7 3.3553 8.5041 0.0327 15 6 4.1857 9.7110 0.0387 16 1 5.1825 9.5409 -0.3681 17 6 3.4825 10.9455 -0.5499 18 6 4.1377 11.7592 0.5787 19 8 5.4281 12.2714 0.2402 20 6 3.2167 12.8211 1.1828 21 9 2.0813 12.2036 1.7183 22 9 3.8966 13.5066 2.1953 23 9 2.8303 13.7244 0.1869 24 6 4.1864 10.4515 1.3865 25 6 1.9179 3.6055 0.0020 26 6 1.2909 2.3751 0.0011 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 4.0194 0.3784 -0.0017 31 1 5.8882 3.3383 0.7270 32 1 5.6902 3.8247 -1.6033 33 1 5.8041 0.5319 1.8051 34 1 5.8629 -0.0854 -0.5474 35 1 2.4508 6.0426 -0.8701 36 1 2.4520 6.0329 0.9098 37 1 2.3883 8.5807 0.0335 38 1 3.8357 11.2160 -1.5450 39 1 2.3955 10.9022 -0.4826 40 1 5.8451 12.7844 0.9460 41 1 3.2918 10.2734 1.9831 42 1 5.1078 10.3234 1.9546 43 1 1.3298 4.5114 0.0033 44 1 0.2123 2.3185 0.0014 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:30:44 Heat of formation + Delta-G solvation = -274.507154 kcal Electronic energy + Delta-G solvation = -34846.958939 eV Core-core repulsion = 29318.454482 eV Total energy + Delta-G solvation = -5528.504457 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.121 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -51.26889 -48.81245 -48.74488 -41.95069 -41.44880 -40.42881 -39.67025 -38.15391 -37.01135 -36.62386 -34.28679 -32.91919 -31.18608 -29.80689 -28.49157 -28.01535 -27.19546 -26.63811 -24.53517 -23.49532 -22.49734 -21.83437 -21.35081 -20.04504 -19.61499 -19.55998 -19.45991 -18.89965 -18.49361 -18.09107 -17.61659 -17.46150 -17.32970 -16.78920 -16.69733 -16.30518 -16.10668 -15.77275 -15.64818 -15.59932 -15.49381 -15.46948 -15.21161 -15.18790 -14.92433 -14.90577 -14.73413 -14.47232 -14.16055 -14.00565 -13.94767 -13.73231 -13.61277 -13.49826 -13.29266 -13.10086 -12.59720 -12.51464 -12.36189 -12.22716 -11.95718 -11.54246 -11.40450 -11.28331 -11.12176 -11.00345 -10.27159 -10.24064 -8.93902 -4.86775 -0.07220 0.21084 1.28202 1.32472 1.38797 1.55293 1.59518 1.89889 2.22229 2.39264 2.42239 2.47056 2.57987 2.65070 2.84103 3.33310 3.41365 3.43389 3.46704 3.49535 3.62538 3.83387 3.92246 3.98704 4.03701 4.07070 4.09954 4.12672 4.27235 4.32948 4.33692 4.39581 4.41408 4.56624 4.63872 4.67418 4.77360 4.84527 4.87649 5.00367 5.07479 5.27993 5.31821 6.05310 6.25754 6.29752 6.40392 6.54865 7.07740 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.342 6.342 3 C 0.088 3.912 4 C -0.143 4.143 5 C -0.119 4.119 6 C -0.084 4.084 7 O -0.545 6.545 8 Si 0.810 3.190 9 C 0.099 3.901 10 O -0.310 6.310 11 C 0.034 3.966 12 C 0.517 3.483 13 O -0.563 6.563 14 N -0.699 5.699 15 C 0.140 3.860 16 H 0.107 0.893 17 C -0.119 4.119 18 C 0.066 3.934 19 O -0.523 6.523 20 C 0.437 3.563 21 F -0.173 7.173 22 F -0.186 7.186 23 F -0.183 7.183 24 C -0.165 4.165 25 C -0.154 4.154 26 C -0.159 4.159 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.114 0.886 30 H 0.123 0.877 31 H 0.080 0.920 32 H 0.372 0.628 33 H -0.267 1.267 34 H -0.287 1.287 35 H 0.128 0.872 36 H 0.126 0.874 37 H 0.424 0.576 38 H 0.103 0.897 39 H 0.135 0.865 40 H 0.405 0.595 41 H 0.122 0.878 42 H 0.092 0.908 43 H 0.176 0.824 44 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.418 2.664 1.335 7.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.257 6.257 3 C 0.042 3.958 4 C -0.161 4.161 5 C -0.120 4.120 6 C -0.192 4.192 7 O -0.351 6.351 8 Si 0.712 3.288 9 C 0.053 3.947 10 O -0.223 6.223 11 C -0.043 4.043 12 C 0.304 3.696 13 O -0.441 6.441 14 N -0.353 5.353 15 C 0.035 3.965 16 H 0.125 0.875 17 C -0.156 4.156 18 C 0.022 3.978 19 O -0.332 6.332 20 C 0.382 3.618 21 F -0.155 7.155 22 F -0.168 7.168 23 F -0.165 7.165 24 C -0.204 4.204 25 C -0.172 4.172 26 C -0.178 4.178 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.132 0.868 30 H 0.140 0.860 31 H 0.098 0.902 32 H 0.221 0.779 33 H -0.193 1.193 34 H -0.215 1.215 35 H 0.146 0.854 36 H 0.144 0.856 37 H 0.263 0.737 38 H 0.121 0.879 39 H 0.153 0.847 40 H 0.257 0.743 41 H 0.140 0.860 42 H 0.111 0.889 43 H 0.194 0.806 44 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -6.284 0.803 1.047 6.421 hybrid contribution -1.996 1.811 0.482 2.738 sum -8.280 2.614 1.529 8.817 Atomic orbital electron populations 1.23386 0.75979 1.05695 1.02640 1.86081 1.23860 1.26720 1.89023 1.18999 0.91715 0.85644 0.99400 1.20158 0.92867 0.96907 1.06177 1.19554 0.96834 0.90603 1.05001 1.25354 0.91124 1.14107 0.88594 1.86657 1.73918 1.42289 1.32209 0.92507 0.90027 0.69926 0.76357 1.18666 0.91524 0.84267 1.00199 1.86089 1.35346 1.11639 1.89252 1.22779 0.92703 0.81731 1.07119 1.20494 0.88355 0.85342 0.75438 1.90792 1.16551 1.87243 1.49465 1.45559 1.11273 1.03666 1.74828 1.22097 0.96260 0.82413 0.95778 0.87520 1.23599 1.02270 0.91233 0.98544 1.23237 0.84866 0.89288 1.00411 1.86626 1.27808 1.73347 1.45382 1.21312 0.81105 0.82973 0.76427 1.93184 1.53211 1.82296 1.86765 1.93186 1.79620 1.81786 1.62187 1.93217 1.91879 1.70091 1.61294 1.24270 1.06180 0.91633 0.98317 1.21476 0.92140 1.00025 1.03561 1.21440 1.01680 0.90722 1.03918 0.91116 0.91201 0.86808 0.85950 0.90243 0.77930 1.19296 1.21489 0.85420 0.85604 0.73723 0.87857 0.84689 0.74271 0.85957 0.88889 0.80638 0.81707 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.04 10.50 -93.38 -0.98 -3.02 16 3 C 0.09 0.53 6.69 22.49 0.15 0.68 16 4 C -0.14 -1.32 8.59 22.36 0.19 -1.13 16 5 C -0.12 -0.92 5.27 -19.78 -0.10 -1.02 16 6 C -0.08 -0.62 2.33 71.24 0.17 -0.46 16 7 O -0.54 -4.97 12.65 -148.98 -1.89 -6.85 16 8 Si 0.81 4.28 30.40 68.60 2.09 6.37 16 9 C 0.10 0.30 6.62 22.49 0.15 0.45 16 10 O -0.31 -0.74 8.58 -74.33 -0.64 -1.38 16 11 C 0.03 -0.24 5.22 71.24 0.37 0.13 16 12 C 0.52 -0.85 7.91 87.66 0.69 -0.16 16 13 O -0.56 -5.53 16.10 16.00 0.26 -5.27 16 14 N -0.70 5.95 5.35 -440.04 -2.36 3.59 16 15 C 0.14 -0.74 4.17 45.52 0.19 -0.55 16 16 H 0.11 0.08 7.46 -2.39 -0.02 0.06 16 17 C -0.12 0.94 7.01 31.12 0.22 1.16 16 18 C 0.07 -0.34 1.36 -10.27 -0.01 -0.35 16 19 O -0.52 1.59 13.41 -148.98 -2.00 -0.41 16 20 C 0.44 -1.13 2.85 71.98 0.21 -0.92 16 21 F -0.17 0.57 15.76 44.97 0.71 1.28 16 22 F -0.19 0.13 16.65 44.97 0.75 0.88 16 23 F -0.18 -0.14 17.18 44.97 0.77 0.63 16 24 C -0.17 1.05 7.15 31.12 0.22 1.28 16 25 C -0.15 0.42 9.03 22.35 0.20 0.62 16 26 C -0.16 0.12 9.03 22.35 0.20 0.33 16 27 H 0.07 -0.48 7.66 -2.39 -0.02 -0.50 16 28 H 0.07 -0.46 7.66 -2.38 -0.02 -0.48 16 29 H 0.11 -0.72 8.14 -2.39 -0.02 -0.74 16 30 H 0.12 1.35 4.94 -2.91 -0.01 1.33 16 31 H 0.08 0.54 7.82 -2.39 -0.02 0.52 16 32 H 0.37 2.31 8.63 -74.06 -0.64 1.67 16 33 H -0.27 -2.09 7.11 99.48 0.71 -1.38 16 34 H -0.29 -3.15 6.81 99.48 0.68 -2.48 16 35 H 0.13 -1.71 7.65 -2.39 -0.02 -1.73 16 36 H 0.13 -1.66 7.67 -2.38 -0.02 -1.68 16 37 H 0.42 -6.92 8.73 -92.71 -0.81 -7.73 16 38 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 39 H 0.14 -1.72 7.86 -2.39 -0.02 -1.73 16 40 H 0.40 -3.54 8.42 -74.05 -0.62 -4.17 16 41 H 0.12 -1.10 7.14 -2.39 -0.02 -1.12 16 42 H 0.09 -0.44 8.14 -2.38 -0.02 -0.46 16 43 H 0.18 -2.05 6.29 -2.91 -0.02 -2.07 16 44 H 0.17 -1.18 6.29 -2.91 -0.02 -1.20 16 Total: 0.00 -27.41 382.21 -0.27 -27.68 By element: Atomic # 1 Polarization: -23.65 SS G_CDS: -0.94 Total: -24.59 kcal Atomic # 6 Polarization: -2.86 SS G_CDS: 3.96 Total: 1.09 kcal Atomic # 7 Polarization: 5.95 SS G_CDS: -2.36 Total: 3.59 kcal Atomic # 8 Polarization: -11.69 SS G_CDS: -5.24 Total: -16.93 kcal Atomic # 9 Polarization: 0.56 SS G_CDS: 2.23 Total: 2.79 kcal Atomic # 14 Polarization: 4.28 SS G_CDS: 2.09 Total: 6.37 kcal Total: -27.41 -0.27 -27.68 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -246.825 kcal (2) G-P(sol) polarization free energy of solvation -27.411 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -274.236 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.271 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.682 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds