Wall clock time and date at job start Thu Mar 4 2021 14:54:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 Si 1.86296 * 109.47105 * 2 1 4 4 C 1.86298 * 109.90865 * 298.66609 * 3 2 1 5 5 C 1.53005 * 109.47022 * 298.51902 * 4 3 2 6 6 C 1.87349 * 109.92320 * 177.55561 * 3 2 1 7 7 C 1.53837 * 107.28961 * 193.91394 * 6 3 2 8 8 N 1.46303 * 109.32911 * 53.75236 * 7 6 3 9 9 C 1.34772 * 119.08807 * 107.67416 * 8 7 6 10 10 O 1.21568 * 120.00218 * 6.55701 * 9 8 7 11 11 C 1.47712 * 120.00205 * 186.55887 * 9 8 7 12 12 N 1.31811 * 126.51689 * 7.38954 * 11 9 8 13 13 N 1.28463 * 110.07266 * 179.97438 * 12 11 9 14 14 C 1.46504 * 124.88487 * 179.97438 * 13 12 11 15 15 C 1.35030 * 110.23381 * 359.97438 * 13 12 11 16 16 C 1.50698 * 126.38950 * 180.02562 * 15 13 12 17 17 O 1.42904 * 109.47139 * 330.00233 * 16 15 13 18 18 Si 1.86302 * 109.47497 * 210.00120 * 16 15 13 19 19 H 1.48500 * 109.47019 * 59.99538 * 18 16 15 20 20 H 1.48497 * 109.47172 * 180.02562 * 18 16 15 21 21 H 1.48504 * 109.47038 * 300.00074 * 18 16 15 22 22 C 1.35364 * 107.23011 * 359.76312 * 15 13 12 23 23 C 1.46304 * 121.82575 * 287.69319 * 8 7 6 24 24 C 1.53828 * 109.22537 * 72.35799 * 23 8 7 25 25 H 1.09007 * 109.47541 * 63.55741 * 1 2 3 26 26 H 1.08997 * 109.47119 * 183.55963 * 1 2 3 27 27 H 1.09004 * 109.47386 * 303.55788 * 1 2 3 28 28 H 1.09002 * 109.46871 * 240.00349 * 2 1 3 29 29 H 1.08996 * 109.47220 * 119.99984 * 2 1 3 30 30 H 1.09006 * 109.47581 * 58.51851 * 4 3 2 31 31 H 1.09006 * 109.47513 * 178.51843 * 4 3 2 32 32 H 1.08998 * 109.46540 * 297.77063 * 5 4 3 33 33 H 1.08998 * 109.47179 * 57.77299 * 5 4 3 34 34 H 1.09003 * 109.46866 * 177.77205 * 5 4 3 35 35 H 1.09006 * 109.88487 * 313.26663 * 6 3 2 36 36 H 1.08996 * 109.88675 * 74.36020 * 6 3 2 37 37 H 1.08999 * 109.42009 * 293.82188 * 7 6 3 38 38 H 1.08998 * 109.54062 * 173.75504 * 7 6 3 39 39 H 1.09005 * 109.47019 * 90.02615 * 14 13 12 40 40 H 1.09000 * 109.47509 * 210.02192 * 14 13 12 41 41 H 1.08996 * 109.47469 * 330.02769 * 14 13 12 42 42 H 1.09008 * 109.47219 * 89.99870 * 16 15 13 43 43 H 0.96703 * 113.99697 * 299.99394 * 17 16 15 44 44 H 1.07998 * 127.25685 * 180.24278 * 22 15 13 45 45 H 1.09000 * 109.51570 * 312.43164 * 23 8 7 46 46 H 1.09002 * 109.55446 * 192.30328 * 23 8 7 47 47 H 1.09000 * 109.88627 * 186.65714 * 24 23 8 48 48 H 1.09005 * 109.95358 * 65.59610 * 24 23 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 14 2.1510 1.7564 0.0000 4 6 1.5702 2.6346 -1.5369 5 6 2.1379 1.9312 -2.7715 6 6 4.0229 1.7717 0.0751 7 6 4.4547 3.2061 0.4256 8 7 3.7663 3.6351 1.6432 9 6 4.4666 3.7386 2.7900 10 8 5.6736 3.5934 2.7804 11 6 3.7678 4.0282 4.0587 12 7 2.4634 4.0744 4.2428 13 7 2.2008 4.3524 5.4692 14 6 0.8532 4.4841 6.0285 15 6 3.3456 4.5060 6.1687 16 6 3.4602 4.8361 7.6346 17 8 2.3354 5.6212 8.0354 18 14 5.0272 5.7982 7.9339 19 1 4.9946 7.0555 7.1444 20 1 5.1404 6.1229 9.3785 21 1 6.1961 4.9824 7.5174 22 6 4.3711 4.3023 5.3090 23 6 2.3386 3.9547 1.6504 24 6 1.5277 2.6538 1.5219 25 1 -0.3634 0.4576 -0.9202 26 1 -0.3633 -1.0256 0.0638 27 1 -0.3634 0.5681 0.8564 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5138 0.8899 30 1 0.4811 2.6157 -1.5767 31 1 1.9152 3.6685 -1.5171 32 1 3.2263 1.9848 -2.7517 33 1 1.8253 0.8870 -2.7706 34 1 1.7662 2.4210 -3.6716 35 1 4.3687 1.0829 0.8459 36 1 4.4351 1.4845 -0.8921 37 1 4.1932 3.8740 -0.3951 38 1 5.5322 3.2331 0.5879 39 1 0.5152 3.5143 6.3941 40 1 0.8698 5.1973 6.8526 41 1 0.1717 4.8383 5.2551 42 1 3.4841 3.9132 8.2141 43 1 2.2511 6.4590 7.5600 44 1 5.4275 4.3428 5.5301 45 1 2.1082 4.6116 0.8117 46 1 2.0811 4.4533 2.5849 47 1 0.4690 2.8866 1.4076 48 1 1.6774 2.0334 2.4056 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17051536_13259642.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:54:35 Heat of formation + Delta-G solvation = -15.391448 kcal Electronic energy + Delta-G solvation = -26964.812262 eV Core-core repulsion = 23373.582385 eV Total energy + Delta-G solvation = -3591.229876 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 325.173 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -43.83529 -40.61650 -38.28938 -37.13905 -34.47151 -33.81040 -33.13003 -32.70315 -31.99506 -30.36225 -28.46481 -26.89243 -24.95090 -24.18225 -23.64913 -23.40631 -22.54236 -21.86922 -20.22059 -18.75898 -17.83573 -17.57580 -17.14118 -16.81245 -16.24575 -16.00665 -15.90784 -15.63738 -15.40401 -15.29844 -14.96719 -14.88242 -14.51178 -14.31264 -14.19137 -14.13351 -13.72886 -13.63704 -13.57699 -13.40972 -13.11846 -12.93864 -12.78545 -12.61429 -12.44285 -12.25645 -12.15511 -12.12087 -12.07675 -11.81823 -11.53344 -10.99274 -10.92094 -10.43993 -10.34673 -10.28987 -10.06668 -9.82905 -9.51364 0.54850 0.79236 1.09763 1.40208 1.41954 1.55758 1.72946 1.79254 1.83604 1.87220 2.13470 2.50107 2.58529 2.94328 3.27335 3.35821 3.84663 4.11481 4.19442 4.23534 4.26032 4.29267 4.33350 4.36563 4.38721 4.44967 4.47345 4.48081 4.51387 4.54536 4.68400 4.70540 4.71565 4.74752 4.85654 5.00733 5.03362 5.10738 5.13267 5.21363 5.25769 5.32320 5.37722 5.41146 5.47926 5.54031 5.64748 5.85384 6.10778 6.42800 6.89204 7.32385 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.410 4.410 3 Si 0.993 3.007 4 C -0.408 4.408 5 C -0.143 4.143 6 C -0.423 4.423 7 C 0.121 3.879 8 N -0.601 5.601 9 C 0.601 3.399 10 O -0.531 6.531 11 C -0.013 4.013 12 N -0.249 5.249 13 N -0.266 5.266 14 C 0.069 3.931 15 C -0.018 4.018 16 C -0.056 4.056 17 O -0.538 6.538 18 Si 0.970 3.030 19 H -0.248 1.248 20 H -0.247 1.247 21 H -0.243 1.243 22 C -0.180 4.180 23 C 0.097 3.903 24 C -0.410 4.410 25 H 0.055 0.945 26 H 0.051 0.949 27 H 0.054 0.946 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.074 0.926 31 H 0.073 0.927 32 H 0.055 0.945 33 H 0.054 0.946 34 H 0.052 0.948 35 H 0.078 0.922 36 H 0.086 0.914 37 H 0.074 0.926 38 H 0.095 0.905 39 H 0.084 0.916 40 H 0.120 0.880 41 H 0.093 0.907 42 H 0.129 0.871 43 H 0.380 0.620 44 H 0.166 0.834 45 H 0.068 0.932 46 H 0.125 0.875 47 H 0.083 0.917 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.544 1.767 1.375 5.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.496 4.496 3 Si 1.187 2.813 4 C -0.495 4.495 5 C -0.201 4.201 6 C -0.510 4.510 7 C -0.001 4.001 8 N -0.334 5.334 9 C 0.388 3.612 10 O -0.406 6.406 11 C -0.171 4.171 12 N -0.086 5.086 13 N -0.054 5.054 14 C -0.071 4.071 15 C -0.143 4.143 16 C -0.166 4.166 17 O -0.343 6.343 18 Si 0.789 3.211 19 H -0.171 1.171 20 H -0.170 1.170 21 H -0.166 1.166 22 C -0.208 4.208 23 C -0.026 4.026 24 C -0.497 4.497 25 H 0.074 0.926 26 H 0.071 0.929 27 H 0.073 0.927 28 H 0.092 0.908 29 H 0.091 0.909 30 H 0.093 0.907 31 H 0.091 0.909 32 H 0.074 0.926 33 H 0.073 0.927 34 H 0.071 0.929 35 H 0.097 0.903 36 H 0.105 0.895 37 H 0.092 0.908 38 H 0.114 0.886 39 H 0.103 0.897 40 H 0.138 0.862 41 H 0.111 0.889 42 H 0.147 0.853 43 H 0.228 0.772 44 H 0.183 0.817 45 H 0.087 0.913 46 H 0.142 0.858 47 H 0.102 0.898 48 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -4.382 1.543 1.383 4.847 hybrid contribution 0.145 -0.020 -0.153 0.212 sum -4.237 1.523 1.230 4.667 Atomic orbital electron populations 1.21332 0.95057 1.01887 1.01662 1.25974 1.00853 1.18276 1.04526 0.79650 0.66984 0.67472 0.67176 1.25983 1.05254 1.06567 1.11660 1.21349 1.00845 1.00319 0.97547 1.26698 1.20731 0.98897 1.04631 1.21175 0.99120 0.94485 0.85350 1.47823 1.10302 1.66509 1.08722 1.17080 0.85918 0.76425 0.81799 1.90794 1.13239 1.50789 1.85743 1.21809 0.89608 1.10002 0.95681 1.73536 1.16914 1.18425 0.99682 1.45589 1.07518 1.47174 1.05134 1.22643 0.78023 1.05453 1.00935 1.21898 0.86703 1.08969 0.96765 1.24806 1.01204 1.01596 0.89007 1.86485 1.47139 1.35184 1.65533 0.85398 0.74666 0.79658 0.81373 1.17117 1.17022 1.16592 1.21541 1.00169 1.08024 0.91095 1.21951 0.78158 0.97047 1.05444 1.26566 1.03984 1.04224 1.14967 0.92611 0.92945 0.92656 0.90776 0.90932 0.90691 0.90855 0.92582 0.92667 0.92854 0.90315 0.89490 0.90751 0.88623 0.89726 0.86211 0.88860 0.85302 0.77193 0.81669 0.91338 0.85807 0.89824 0.90307 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.08 9.29 37.16 0.35 0.42 16 2 C -0.41 0.21 5.17 37.16 0.19 0.40 16 3 Si 0.99 -1.44 8.65 -169.99 -1.47 -2.91 16 4 C -0.41 0.55 5.17 37.16 0.19 0.74 16 5 C -0.14 0.13 9.29 37.16 0.35 0.48 16 6 C -0.42 -0.06 5.23 37.59 0.20 0.14 16 7 C 0.12 0.16 5.90 -3.71 -0.02 0.14 16 8 N -0.60 -1.43 2.62 -174.14 -0.46 -1.88 16 9 C 0.60 2.98 7.64 -12.39 -0.09 2.88 16 10 O -0.53 -4.17 16.21 5.31 0.09 -4.08 16 11 C -0.01 -0.05 6.76 -82.76 -0.56 -0.61 16 12 N -0.25 -0.50 8.40 33.42 0.28 -0.22 16 13 N -0.27 -0.05 3.70 -63.85 -0.24 -0.29 16 14 C 0.07 -0.22 11.00 59.85 0.66 0.44 16 15 C -0.02 0.00 6.17 -82.21 -0.51 -0.51 16 16 C -0.06 0.12 2.99 36.00 0.11 0.23 16 17 O -0.54 1.64 10.02 -35.23 -0.35 1.29 16 18 Si 0.97 -1.64 26.64 -169.99 -4.53 -6.17 16 19 H -0.25 0.20 7.11 56.52 0.40 0.60 16 20 H -0.25 0.19 7.11 56.52 0.40 0.59 16 21 H -0.24 0.14 6.87 56.52 0.39 0.53 16 22 C -0.18 -0.44 9.36 -39.36 -0.37 -0.81 16 23 C 0.10 0.04 5.40 -3.72 -0.02 0.02 16 24 C -0.41 0.23 5.21 37.59 0.20 0.43 16 25 H 0.05 -0.06 8.04 -51.93 -0.42 -0.48 16 26 H 0.05 -0.01 8.14 -51.93 -0.42 -0.43 16 27 H 0.05 -0.06 7.87 -51.93 -0.41 -0.47 16 28 H 0.07 -0.04 7.76 -51.93 -0.40 -0.44 16 29 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 30 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 31 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 32 H 0.06 -0.08 7.54 -51.93 -0.39 -0.47 16 33 H 0.05 -0.07 7.71 -51.93 -0.40 -0.47 16 34 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.08 0.12 7.99 -51.93 -0.41 -0.30 16 36 H 0.09 -0.08 7.51 -51.93 -0.39 -0.47 16 37 H 0.07 -0.04 8.05 -51.93 -0.42 -0.46 16 38 H 0.10 0.29 6.88 -51.93 -0.36 -0.07 16 39 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 40 H 0.12 -0.56 5.00 -51.93 -0.26 -0.81 16 41 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 42 H 0.13 -0.40 7.96 -51.92 -0.41 -0.81 16 43 H 0.38 -2.26 8.39 45.56 0.38 -1.87 16 44 H 0.17 0.31 6.87 -52.49 -0.36 -0.05 16 45 H 0.07 -0.07 8.05 -51.93 -0.42 -0.49 16 46 H 0.12 0.13 4.24 -72.88 -0.31 -0.18 16 47 H 0.08 -0.14 7.99 -51.93 -0.41 -0.56 16 48 H 0.08 0.07 7.99 -51.93 -0.41 -0.35 16 LS Contribution 374.19 15.07 5.64 5.64 Total: 0.00 -7.18 374.19 -7.93 -15.11 By element: Atomic # 1 Polarization: -3.34 SS G_CDS: -7.55 Total: -10.89 kcal Atomic # 6 Polarization: 3.74 SS G_CDS: 0.66 Total: 4.40 kcal Atomic # 7 Polarization: -1.98 SS G_CDS: -0.41 Total: -2.39 kcal Atomic # 8 Polarization: -2.52 SS G_CDS: -0.27 Total: -2.79 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: -6.00 Total: -9.08 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -7.18 -7.93 -15.11 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17051536_13259642.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.285 kcal (2) G-P(sol) polarization free energy of solvation -7.179 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.927 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.391 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds